Showing: indelreset
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is DANN capable of scoring insertion and deletion?
indel genome annotation snp non-coding written 19 days ago by fetus000020 • updated 14 hours ago by Biostar ♦♦ 10
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somatic variant calling with no germline sample
indel snp somatic mutation written 9 days ago by Bogdan200 • updated 4 days ago by d-cameron500
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Merge SNP & INDEL vcf files
vcf indel snp written 20 days ago by mplace10
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In GATK, SNPs and INDELs are called separately or together?
indel gatk variant snp written 4 weeks ago by Chen Sun390 • updated 29 days ago by WouterDeCoster14k
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INDEL left alignment in bam and vcf
indel aligner bowtie bwa blasr written 6 weeks ago by mark.rose10 • updated 6 weeks ago by Brian Bushnell10k
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What Are The Next Steps For Processing Indels From Gatk
indel gatk depth-of-coverage filtering written 3.9 years ago by bari140 • updated 7 weeks ago by Biostar ♦♦ 10
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How to extract information from a VCF file
indel vcf galaxy snp mnp written 3 months ago by ron20 • updated 3 months ago by Macspider580
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Multi-Sample Indel Realignment Using Gatk
indel gatk written 4.3 years ago by Sebastian10 • updated 3 months ago by Biostar ♦♦ 10
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INDEL detection tool recommendation
indel cnv written 3 months ago by nayshool20
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local de novo assembly and split-read alignment at known sites and output bams?
indel snv written 4 months ago by lyz10302012230 • updated 4 months ago by Devon Ryan63k
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IndelRealigner and RealignerTargetCreator for amplicon sequencing
indel amplicon-seq ngs written 5 months ago by kulvait160 • updated 5 months ago by WouterDeCoster14k
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indel preprocessing prior to bam-readcount
indel varscan fpfilter.pl bam-readcount written 6 months ago by Jokhe40 • updated 5 months ago by m.b0
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gold standard for human genome genotyping
indel 1k human genome dataset genotyping written 9 months ago by watermelon10370 • updated 5 months ago by Biostar ♦♦ 10
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gatk base recalibration results for 1000 genomes
indel 1000 genomes snp gatk written 6 months ago by cmo30 • updated 5 months ago by Biostar ♦♦ 10
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Convert INDEL format for use in Annovar
indel annovar insertion-deletion annotation written 6 months ago by User 7754120 • updated 6 months ago by igor3.6k
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samtools mpileup not calling small (6 base) INSERT
indel vcf samtools mpileup prokaryote written 9 months ago by ALchEmiXt1.8k • updated 6 months ago by sb10
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VariantCalling with single sanger read
indel snps variantcalling blast written 6 months ago by Ameerosein70 • updated 6 months ago by WouterDeCoster14k
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How to phase a WGS dataset preserving the indels within it?
genome indel snp phasing sequencing written 9 months ago by Shab86180 • updated 9 months ago by piet1.3k
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The Best Pipeline for Indel Calling
indel insert deletion written 10 months ago by Shicheng Guo4.2k • updated 10 months ago by natasha.sernova2.4k
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Scalpel Error - INDELS
indel scalpel written 10 months ago by agata88460 • updated 10 months ago by Biostar ♦♦ 10
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vcf files in gatk not showing data lines
haplotypecaller gatk indel snp written 11 months ago by jamessemaj7120 • updated 10 months ago by Biostar ♦♦ 10
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detection of in/del in sanger sequencing
indel sanger variant detection written 11 months ago by Ameerosein70 • updated 11 months ago by Devon Ryan63k
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