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<prev • 211 results • page 1 of 8 • next >
2
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How to calculate the SNP/Indel number between cultivars by using combined VCF file?
genome vcf indel snp written 8 days ago by r00628112 • 10 • updated 7 days ago by David Minkley • 10
0
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0
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86
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How to filter SNP and Indel under these criteria?
indel vcffilter freebayes vcftools snp written 20 days ago by r00628112 • 10 • updated 20 days ago by Pierre Lindenbaum ♦ 124k
1
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0
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108
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how generated haploid variants by varscan
indel varscan haploid snp written 3 months ago by kamel • 30
3
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1
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216
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1
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how can a DELETION be not a NULL variant?
exome indel deletion variant acmg written 5 months ago by cocchi.e89 • 30 • updated 5 months ago by Jean-Karim Heriche ♦ 21k
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159
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Safe ways to chunk data to speed up Pindel?
indel pindel written 5 months ago by steve • 2.4k
8
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1
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172
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1
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Are small insertions always single-stranded?
indel written 5 months ago by syntax • 50
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1
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303
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1
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Validation of SNP and INDEL calling pipeline
genome indel alignment snp written 6 months ago by kspata • 60 • updated 6 months ago by WouterDeCoster ♦ 42k
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228
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VARIANT effect retrieving
indel variant effect snv written 8 months ago by cocchi.e89 • 30 • updated 6 months ago by Biostar ♦♦ 20
3
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2.4k
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Reducing False Positive Indel Calls From Pindel
indel somatic variant pindel written 8.0 years ago by Rlong • 340 • updated 7 months ago by isaacpei • 0
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1
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301
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VCF - InDels and SNPs relation
indel vcf snp written 7 months ago by bwczech • 90 • updated 7 months ago by Pierre Lindenbaum ♦ 124k
4
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3
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254
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3
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Finding if dbSNP type in biomart
indel R biomart snp written 7 months ago by zakkaknadine • 10 • updated 7 months ago by zx8754 ♦ 8.8k
4
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1
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936
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1
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Identify homopolymer stretches in a given genome
variant calling indel homopolymers snp written 2.1 years ago by ATpoint ♦ 26k
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163
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difference between Copy Number 0 and INDEL 1000genomes
1000g indel cnv sv written 7 months ago by cocchi.e89 • 30
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What Do You Do With Indels Data?
indel analysis written 7.7 years ago by User 2005 • 70 • updated 8 months ago by Biostar ♦♦ 20
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1.9k
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Strange variant call it show a indel but looks like a SNP
indel snp variant ion caller written 5.2 years ago by cristianrohr768 • 30 • updated 8 months ago by Biostar ♦♦ 20
5
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1
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317
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1
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New Variants Effect Prediction Tools
indel variant effect snv written 8 months ago by cocchi.e89 • 30 • updated 8 months ago by Emily_Ensembl ♦ 20k
1
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1
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801
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1
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RNA-SEQ SNP calling
indel variant snp rna-seq written 10 months ago by babji2318 • 0 • updated 10 months ago by JC ♦ 9.1k
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5
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1.1k
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5
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VariantCalling with single sanger read
indel snps variantcalling blast written 3.3 years ago by Amirosein • 70 • updated 10 months ago by trausch • 1.4k
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269
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how to change indel to smallest length in vcf
indel annotation next-gen vcf written 11 months ago by 1097049297 • 0
12
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3
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3.6k
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9 follow
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Mismatch and Indel statistics from BAM/SAM file
indel bam sam written 2.6 years ago by sbdk82 • 60 • updated 12 months ago by FatihSarigol • 140
7
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1
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757
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1
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How to merge vcf files (output of VarScan2 somatic)?
vcf indel merge varscan2 snp written 12 months ago by Raheleh • 120
3
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1
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664
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1
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Variants calling by bcftools
indel alignment snp written 12 months ago by Mbillah • 110 • updated 12 months ago by ATpoint ♦ 26k
2
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363
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Advice for indel calling
indel rna-seq written 14 months ago by jparker4 • 20 • updated 13 months ago by Biostar ♦♦ 20
1
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1
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1.1k
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1
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is DANN capable of scoring insertion and deletion?
indel genome annotation snp non-coding written 2.8 years ago by fetus0000 • 20 • updated 13 months ago by Kevin Blighe ♦ 52k
6
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885
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Long Reads: Nanopore/ PacBio
indel nanopre cnv snv longreads written 13 months ago by ResearchR • 70
1
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0
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507
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0
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Question about Base calling for pacbio data
genome indel pacbio snp gatk written 14 months ago by kamel • 30 • updated 14 months ago by lakhujanivijay ♦ 4.7k
18
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4
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3.7k
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5 follow
4
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Indel Detection For 454 Resequencing
indel next-gen sequencing written 9.4 years ago by Daniel Swan ♦ 13k • updated 15 months ago by RamRS ♦ 25k
19
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4
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8.6k
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8 follow
4
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Indel Left/Right Alignment
indel written 6.7 years ago by sa9 • 810 • updated 15 months ago by hugues.sicotte • 0
0
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1
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544
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1
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Allele counting tool for a list of known indels from paired end sequencing data
indel pindel sequencing allele counting genotyping written 15 months ago by erfan741 • 50 • updated 15 months ago by btsui • 290
4
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3
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1.0k
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5 follow
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Detecting Homozygous Insertion from Sanger Seq
indel sanger written 16 months ago by justinms • 10 • updated 16 months ago by trausch • 1.4k
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