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<prev • 214 results • page 1 of 8 • next >
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Detection of CNV(InDel) of intermediate size
indel cnv written 7 weeks ago by CY • 470 • updated 5 weeks ago by Biostar ♦♦ 20
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274
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1
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How to filter SNP and Indel under these criteria?
indel vcffilter freebayes vcftools snp written 4 months ago by r00628112 • 10 • updated 12 weeks ago by devarora • 120
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1
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213
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1
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Some interpretation of Strelka output
indel wgs strelka written 12 weeks ago by A • 3.7k • updated 12 weeks ago by ATpoint ♦ 31k
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116
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It is normal to get nothing for VAF field for INDEL
indel wgs cnv written 3 months ago by A • 3.7k
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5 follow
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Indel Annotation Tools, Not Loss Of Function
indel annotation written 8.2 years ago by Mdeng • 510 • updated 3 months ago by Collin • 790
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1
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144
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How to calculate the SNP/Indel number between cultivars by using combined VCF file?
genome vcf indel snp written 4 months ago by r00628112 • 10 • updated 4 months ago by David Minkley • 10
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151
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how generated haploid variants by varscan
indel varscan haploid snp written 6 months ago by kamel • 30
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1
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286
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1
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how can a DELETION be not a NULL variant?
exome indel deletion variant acmg written 9 months ago by cocchi.e89 • 50 • updated 9 months ago by Jean-Karim Heriche ♦ 21k
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216
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Safe ways to chunk data to speed up Pindel?
indel pindel written 9 months ago by steve • 2.5k
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206
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Are small insertions always single-stranded?
indel written 9 months ago by syntax • 60
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390
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1
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Validation of SNP and INDEL calling pipeline
genome indel alignment snp written 9 months ago by kspata • 70 • updated 9 months ago by WouterDeCoster ♦ 43k
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279
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VARIANT effect retrieving
indel variant effect snv written 12 months ago by cocchi.e89 • 50 • updated 10 months ago by Biostar ♦♦ 20
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2.5k
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Reducing False Positive Indel Calls From Pindel
indel somatic variant pindel written 8.3 years ago by Rlong • 340 • updated 10 months ago by isaacpei • 0
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362
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VCF - InDels and SNPs relation
indel vcf snp written 10 months ago by misterie • 90 • updated 10 months ago by Pierre Lindenbaum ♦ 127k
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3
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326
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3
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Finding if dbSNP type in biomart
indel R biomart snp written 11 months ago by zakkaknadine • 10 • updated 10 months ago by zx8754 ♦ 9.1k
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1.0k
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1
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Identify homopolymer stretches in a given genome
variant calling indel homopolymers snp written 2.4 years ago by ATpoint ♦ 31k
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203
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difference between Copy Number 0 and INDEL 1000genomes
1000g indel cnv sv written 11 months ago by cocchi.e89 • 50
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What Do You Do With Indels Data?
indel analysis written 8.0 years ago by User 2005 • 70 • updated 12 months ago by Biostar ♦♦ 20
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Strange variant call it show a indel but looks like a SNP
indel snp variant ion caller written 5.5 years ago by cristianrohr768 • 30 • updated 12 months ago by Biostar ♦♦ 20
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1
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394
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1
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New Variants Effect Prediction Tools
indel variant effect snv written 12 months ago by cocchi.e89 • 50 • updated 12 months ago by Emily_Ensembl ♦ 20k
2
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1
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988
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1
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RNA-SEQ SNP calling
indel variant snp rna-seq written 13 months ago by babji2318 • 10 • updated 13 months ago by JC ♦ 9.7k
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VariantCalling with single sanger read
indel snps variantcalling blast written 3.6 years ago by Amirosein • 70 • updated 14 months ago by trausch • 1.4k
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306
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how to change indel to smallest length in vcf
indel annotation next-gen vcf written 15 months ago by 1097049297 • 0
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3
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9 follow
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Mismatch and Indel statistics from BAM/SAM file
indel bam sam written 2.9 years ago by sbdk • 60 • updated 15 months ago by FatihSarigol • 140
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1
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950
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1
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How to merge vcf files (output of VarScan2 somatic)?
vcf indel merge varscan2 snp written 15 months ago by Raheleh • 140
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1
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Variants calling by bcftools
indel alignment snp written 16 months ago by Mbillah • 110 • updated 16 months ago by ATpoint ♦ 31k
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405
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Advice for indel calling
indel rna-seq written 18 months ago by jparker4 • 20 • updated 16 months ago by Biostar ♦♦ 20
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1.3k
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is DANN capable of scoring insertion and deletion?
indel genome annotation snp non-coding written 3.1 years ago by fetus0000 • 20 • updated 16 months ago by Kevin Blighe ♦ 56k
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Long Reads: Nanopore/ PacBio
indel nanopre cnv snv longreads written 17 months ago by ResearchR • 70
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Question about Base calling for pacbio data
genome indel pacbio snp gatk written 18 months ago by kamel • 30 • updated 18 months ago by lakhujanivijay ♦ 4.8k
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