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<prev • 196 results • page 1 of 7 • next >
3
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Variants calling by bcftools
indel alignment snp written 13 days ago by Mbillah • 100 • updated 13 days ago by ATpoint ♦ 11k
2
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128
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Advice for indel calling
indel rna-seq written 11 weeks ago by jparker4 • 20 • updated 29 days ago by Biostar ♦♦ 20
1
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1
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562
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is DANN capable of scoring insertion and deletion?
indel genome annotation snp non-coding written 21 months ago by fetus0000 • 20 • updated 4 weeks ago by Kevin Blighe ♦ 33k
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199
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Long Reads: Nanopore/ PacBio
indel nanopre cnv snv longreads written 6 weeks ago by ResearchR • 40
1
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0
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195
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0
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Question about Base calling for pacbio data
genome indel pacbio snp gatk written 10 weeks ago by kamel • 0 • updated 10 weeks ago by Vijay Lakhujani ♦ 3.4k
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5 follow
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Indel Detection For 454 Resequencing
indel next-gen sequencing written 8.4 years ago by Daniel Swan ♦ 13k • updated 3 months ago by RamRS ♦ 19k
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7 follow
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Indel Left/Right Alignment
indel written 5.7 years ago by sa9 • 800 • updated 3 months ago by hugues.sicotte • 0
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252
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1
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Allele counting tool for a list of known indels from paired end sequencing data
indel pindel sequencing allele counting genotyping written 3 months ago by erfan741 • 30 • updated 3 months ago by btsui • 280
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3
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5 follow
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Detecting Homozygous Insertion from Sanger Seq
indel sanger written 4 months ago by justinms • 10 • updated 4 months ago by trausch • 1.2k
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using the docker container of cgpPINDEL
indel wgs snv pindel written 6 months ago by Bogdan • 690 • updated 4 months ago by Biostar ♦♦ 20
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1
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Can´T Find The Snps With Samtools (Only Get Indels)
indel alignment samtools snp written 7.3 years ago by Pilar E. • 90 • updated 5 months ago by Biostar ♦♦ 20
0
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349
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SNP + INDEL Merging Guidelines
vcf indel snp merging written 5 months ago by QVINTVS_FABIVS_MAXIMVS • 2.2k
8
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425
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When should you left-align INDELs (and why?)
indel vcf left align written 6 months ago by QVINTVS_FABIVS_MAXIMVS • 2.2k
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5 follow
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How do variant callers get genotype info?
variant calling indel snp phasing written 6 months ago by afzm • 20 • updated 6 months ago by Jeremy Leipzig ♦ 18k
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246
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How to analyse mtDNA insertion from NGS data?
indel mtdna ngs written 6 months ago by MatthewP • 30
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2
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332
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2
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Determine Insertion Sequence
indel assembly alignment sv sequencing written 7 months ago by aostern • 30 • updated 7 months ago by d-cameron • 1.9k
5
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1
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309
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1
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SNP/indel annotation in Arabidopsis
indel varscan arabidopsis snp written 7 months ago by Federico Giorgi • 420 • updated 7 months ago by finswimmer ♦ 8.0k
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195
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locateVariants returns an empty result
indel R bioconductor variantannotation written 8 months ago by boris • 0
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2
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557
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5 follow
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Is indel realigning necessary for INDEL discovery?
indel gatk indelrealigner written 8 months ago by deepti1rao • 20 • updated 8 months ago by Jorge Amigo ♦ 11k
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6 follow
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a realiable algorithm that calls INDELS of length 50bp-300bp in cancer genomes
indel sv snv cnv written 9 months ago by Bogdan • 690 • updated 8 months ago by Eric T. • 2.3k
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310
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Process the VCF files for a huge number of samples
vcf indel exome-seq snp written 9 months ago by wangdp123 • 140
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1
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537
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Changing the reference haplotype in VCF
vcf indel alignment snp written 9 months ago by Michael Kosicki • 80 • updated 9 months ago by Kevin Blighe ♦ 33k
4
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1
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572
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1
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Identify homopolymer stretches in a given genome
variant calling indel homopolymers snp written 13 months ago by ATpoint ♦ 11k
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422
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Is there something wrong with my Indel Calling protocol?
indel genome alignment bwa rna-seq written 10 months ago by lishen0709 • 0
2
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1
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433
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Identifying variants differing between control/treatment
variant-calling gatk indel snp written 11 months ago by rmf • 460 • updated 11 months ago by Pierre Lindenbaum ♦ 115k
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Where can I find NGS data with large indels
indel data ngs written 12 months ago by yingjin225 • 10 • updated 11 months ago by Biostar ♦♦ 20
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Indel heterozygosity frequency
indel snp written 12 months ago by hdtms • 20
8
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1
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Can phasing or pre-phase during basecall cause indel?
indel phasing written 12 months ago by CY • 270 • updated 12 months ago by Kevin Blighe ♦ 33k
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408
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Annotation of genomic variants
indel analysis mutations snp variants written 12 months ago by onemoreuser • 10
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how to judge the genotype for the postion with 'rs8175347' ?
indel snp sequencing written 13 months ago by kaixian110 • 0 • updated 13 months ago by Kevin Blighe ♦ 33k
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