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<prev • 219 results • page 1 of 8 • next >
8
votes
1
answer
326
views
1
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Are small insertions always single-stranded?
indel written 18 months ago by syntax • 60 • updated 9 weeks ago by Biostar ♦♦ 20
0
votes
1
answer
141
views
1
answer
Aligning & Comparing References for SNPs / Indels
indel tool snp virus written 12 weeks ago by jnowacki • 70 • updated 12 weeks ago by colindaven • 2.5k
5
votes
1
answer
2.9k
views
1
answer
Indel Notation In Variant Calling
indel written 9.7 years ago by Andrea_Bio • 2.6k • updated 3 months ago by Biostar ♦♦ 20
9
votes
1
answer
324
views
5 follow
1
answer
Indel coding in python
indel coding biopython written 4 months ago by adrian18_07 • 10 • updated 4 months ago by zx8754 ♦ 9.9k
0
votes
0
answers
129
views
0
answers
How take advantage of ERCC spike-ins to improve variant calling
indel snp rna-seq written 4 months ago by danson.wooi • 0
0
votes
0
answers
142
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0
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Split phased haplotypes of same person coming from same parents
indel haplotype variant snp written 7 months ago by Parham • 1.5k
25
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2
answers
15k
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5 follow
2
answers
Split Vcf File Into Snps And Indels
vcf indel split snp gatk written 8.5 years ago by pablo.riesgo • 140 • updated 8 months ago by hsiaoyi0504 • 60
0
votes
0
answers
193
views
0
answers
Blast InDels in CLC
indel clc blast written 8 months ago by chuck.barden3 • 0
1
vote
0
answers
209
views
0
answers
Detection of CNV(InDel) of intermediate size
indel cnv written 11 months ago by CY • 550 • updated 10 months ago by Biostar ♦♦ 20
0
votes
1
answer
703
views
1
answer
How to filter SNP and Indel under these criteria?
indel vcffilter freebayes vcftools snp written 14 months ago by r00628112 • 10 • updated 12 months ago by devarora • 240
2
votes
1
answer
819
views
1
answer
Some interpretation of Strelka output
indel wgs strelka written 12 months ago by A • 3.9k • updated 12 months ago by ATpoint ♦ 44k
0
votes
0
answers
234
views
0
answers
It is normal to get nothing for VAF field for INDEL
indel wgs cnv written 12 months ago by A • 3.9k
5
votes
5
answers
3.1k
views
5 follow
5
answers
Indel Annotation Tools, Not Loss Of Function
indel annotation written 9.0 years ago by Mdeng • 510 • updated 13 months ago by Collin • 860
2
votes
1
answer
283
views
1
answer
How to calculate the SNP/Indel number between cultivars by using combined VCF file?
genome vcf indel snp written 13 months ago by r00628112 • 10 • updated 13 months ago by David Minkley • 10
1
vote
0
answers
267
views
0
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how generated haploid variants by varscan
indel varscan haploid snp written 16 months ago by kamel • 30
3
votes
1
answer
469
views
1
answer
how can a DELETION be not a NULL variant?
exome indel deletion variant acmg written 18 months ago by cocchi.e89 • 120 • updated 18 months ago by Jean-Karim Heriche ♦ 24k
0
votes
0
answers
353
views
0
answers
Safe ways to chunk data to speed up Pindel?
indel pindel written 18 months ago by steve • 2.7k
0
votes
1
answer
592
views
1
answer
Validation of SNP and INDEL calling pipeline
genome indel alignment snp written 19 months ago by kspata • 70 • updated 19 months ago by WouterDeCoster ♦ 45k
0
votes
0
answers
379
views
0
answers
VARIANT effect retrieving
indel variant effect snv written 22 months ago by cocchi.e89 • 120 • updated 20 months ago by Biostar ♦♦ 20
3
votes
0
answers
2.7k
views
0
answers
Reducing False Positive Indel Calls From Pindel
indel somatic variant pindel written 9.1 years ago by Rlong • 340 • updated 20 months ago by isaacpei • 0
0
votes
1
answer
527
views
1
answer
VCF - InDels and SNPs relation
indel vcf snp written 20 months ago by misterie • 90 • updated 20 months ago by Pierre Lindenbaum ♦ 133k
4
votes
3
answers
479
views
3
answers
Finding if dbSNP type in biomart
indel R biomart snp written 20 months ago by zakkaknadine • 10 • updated 20 months ago by zx8754 ♦ 9.9k
4
votes
1
answer
1.3k
views
1
answer
Identify homopolymer stretches in a given genome
variant calling indel homopolymers snp written 3.2 years ago by ATpoint ♦ 44k
0
votes
0
answers
309
views
0
answers
difference between Copy Number 0 and INDEL 1000genomes
1000g indel cnv sv written 21 months ago by cocchi.e89 • 120
5
votes
1
answer
1.7k
views
1
answer
What Do You Do With Indels Data?
indel analysis written 8.8 years ago by User 2005 • 70 • updated 21 months ago by Biostar ♦♦ 20
0
votes
0
answers
2.1k
views
0
answers
Strange variant call it show a indel but looks like a SNP
indel snp variant ion caller written 6.3 years ago by cristianrohr768 • 30 • updated 21 months ago by Biostar ♦♦ 20
5
votes
1
answer
521
views
1
answer
New Variants Effect Prediction Tools
indel variant effect snv written 22 months ago by cocchi.e89 • 120 • updated 22 months ago by Emily_Ensembl ♦ 21k
2
votes
1
answer
1.4k
views
1
answer
RNA-SEQ SNP calling
indel variant snp rna-seq written 23 months ago by babji2318 • 10 • updated 23 months ago by JC ♦ 12k
5
votes
5
answers
1.3k
views
5
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VariantCalling with single sanger read
indel snps variantcalling blast written 4.4 years ago by Amirosein • 70 • updated 23 months ago by trausch • 1.5k
0
votes
0
answers
406
views
0
answers
how to change indel to smallest length in vcf
indel annotation next-gen vcf written 2.1 years ago by 1097049297 • 0
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