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<prev • 216 results • page 1 of 8 • next >
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Split phased haplotypes of same person coming from same parents
indel haplotype variant snp written 6 weeks ago by Parham • 1.5k
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2
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14k
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5 follow
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Split Vcf File Into Snps And Indels
vcf indel split snp gatk written 8.1 years ago by pablo.riesgo • 140 • updated 10 weeks ago by hsiaoyi0504 • 60
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121
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Blast InDels in CLC
indel clc blast written 3 months ago by chuck.barden3 • 0
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161
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Detection of CNV(InDel) of intermediate size
indel cnv written 5 months ago by CY • 510 • updated 5 months ago by Biostar ♦♦ 20
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1
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441
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1
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How to filter SNP and Indel under these criteria?
indel vcffilter freebayes vcftools snp written 8 months ago by r00628112 • 10 • updated 6 months ago by devarora • 150
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1
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481
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1
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Some interpretation of Strelka output
indel wgs strelka written 7 months ago by A • 3.8k • updated 7 months ago by ATpoint ♦ 36k
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172
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It is normal to get nothing for VAF field for INDEL
indel wgs cnv written 7 months ago by A • 3.8k
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5 follow
5
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Indel Annotation Tools, Not Loss Of Function
indel annotation written 8.6 years ago by Mdeng • 510 • updated 7 months ago by Collin • 840
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1
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193
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1
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How to calculate the SNP/Indel number between cultivars by using combined VCF file?
genome vcf indel snp written 8 months ago by r00628112 • 10 • updated 8 months ago by David Minkley • 10
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208
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how generated haploid variants by varscan
indel varscan haploid snp written 11 months ago by kamel • 30
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1
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361
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1
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how can a DELETION be not a NULL variant?
exome indel deletion variant acmg written 13 months ago by cocchi.e89 • 80 • updated 13 months ago by Jean-Karim Heriche ♦ 23k
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278
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Safe ways to chunk data to speed up Pindel?
indel pindel written 13 months ago by steve • 2.6k
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248
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1
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Are small insertions always single-stranded?
indel written 13 months ago by syntax • 60
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1
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496
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1
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Validation of SNP and INDEL calling pipeline
genome indel alignment snp written 14 months ago by kspata • 70 • updated 14 months ago by WouterDeCoster ♦ 44k
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332
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VARIANT effect retrieving
indel variant effect snv written 16 months ago by cocchi.e89 • 80 • updated 14 months ago by Biostar ♦♦ 20
3
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2.6k
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Reducing False Positive Indel Calls From Pindel
indel somatic variant pindel written 8.7 years ago by Rlong • 340 • updated 15 months ago by isaacpei • 0
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1
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441
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1
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VCF - InDels and SNPs relation
indel vcf snp written 15 months ago by misterie • 90 • updated 15 months ago by Pierre Lindenbaum ♦ 129k
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3
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388
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3
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Finding if dbSNP type in biomart
indel R biomart snp written 15 months ago by zakkaknadine • 10 • updated 15 months ago by zx8754 ♦ 9.4k
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1
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1.1k
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1
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Identify homopolymer stretches in a given genome
variant calling indel homopolymers snp written 2.8 years ago by ATpoint ♦ 36k
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252
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difference between Copy Number 0 and INDEL 1000genomes
1000g indel cnv sv written 15 months ago by cocchi.e89 • 80
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1.6k
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What Do You Do With Indels Data?
indel analysis written 8.3 years ago by User 2005 • 70 • updated 16 months ago by Biostar ♦♦ 20
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2.0k
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Strange variant call it show a indel but looks like a SNP
indel snp variant ion caller written 5.8 years ago by cristianrohr768 • 30 • updated 16 months ago by Biostar ♦♦ 20
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1
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450
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1
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New Variants Effect Prediction Tools
indel variant effect snv written 16 months ago by cocchi.e89 • 80 • updated 16 months ago by Emily_Ensembl ♦ 21k
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1
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1.2k
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1
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RNA-SEQ SNP calling
indel variant snp rna-seq written 17 months ago by babji2318 • 10 • updated 17 months ago by JC ♦ 10k
5
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5
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1.2k
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VariantCalling with single sanger read
indel snps variantcalling blast written 3.9 years ago by Amirosein • 70 • updated 18 months ago by trausch • 1.5k
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357
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how to change indel to smallest length in vcf
indel annotation next-gen vcf written 19 months ago by 1097049297 • 0
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3
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9 follow
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Mismatch and Indel statistics from BAM/SAM file
indel bam sam written 3.2 years ago by sbdk • 60 • updated 19 months ago by FatihSarigol • 160
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1
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1.2k
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1
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How to merge vcf files (output of VarScan2 somatic)?
vcf indel merge varscan2 snp written 19 months ago by Rahil • 150
3
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1
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1
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Variants calling by bcftools
indel alignment snp written 20 months ago by Mbillah • 110 • updated 20 months ago by ATpoint ♦ 36k
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459
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0
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Advice for indel calling
indel rna-seq written 22 months ago by jparker4 • 20 • updated 20 months ago by Biostar ♦♦ 20
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