Showing: indelreset
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How do variant callers get genotype info?
variant calling indel snp phasing written 13 months ago by afzm20 • updated 13 months ago by Jeremy Leipzig18k
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Determine Insertion Sequence
indel assembly alignment sv sequencing written 14 months ago by aostern30 • updated 14 months ago by d-cameron2.0k
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SNP/indel annotation in Arabidopsis
indel varscan arabidopsis snp written 15 months ago by Federico Giorgi490 • updated 15 months ago by finswimmer11k
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Is indel realigning necessary for INDEL discovery?
indel gatk indelrealigner written 15 months ago by deepti1rao20 • updated 15 months ago by Jorge Amigo11k
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a realiable algorithm that calls INDELS of length 50bp-300bp in cancer genomes
indel sv snv cnv written 16 months ago by Bogdan800 • updated 16 months ago by Eric T.2.5k
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4
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Changing the reference haplotype in VCF
vcf indel alignment snp written 16 months ago by Michael Kosicki80 • updated 16 months ago by Kevin Blighe45k
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Identifying variants differing between control/treatment
variant-calling gatk indel snp written 18 months ago by rmf680 • updated 18 months ago by Pierre Lindenbaum121k
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Where can I find NGS data with large indels
indel data ngs written 19 months ago by yingjin22510 • updated 18 months ago by Biostar ♦♦ 20
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Indel heterozygosity frequency
indel snp written 19 months ago by hdtms 20
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Can phasing or pre-phase during basecall cause indel?
indel phasing written 19 months ago by CY370 • updated 19 months ago by Kevin Blighe45k
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how to judge the genotype for the postion with 'rs8175347' ?
indel snp sequencing written 20 months ago by kaixian1100 • updated 20 months ago by Kevin Blighe45k
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Indel: Insertion/Deletion count
indel written 20 months ago by hdtms 20
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Variant Calling in Low-Complexity Regions
indel low-complexity variants snp varscan written 21 months ago by ATpoint19k • updated 20 months ago by Biostar ♦♦ 20
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In GATK, SNPs and INDELs are called separately or together?
indel gatk variant snp written 2.4 years ago by Chen890 • updated 20 months ago by Biostar ♦♦ 20
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52
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Filtering Vcf File
vcf indel vcftools snp written 6.9 years ago by bioinfo720 • updated 21 months ago by DataFanatic130
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1
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Indel detectors for Ion Torrent data
indel written 21 months ago by genya3520 • updated 21 months ago by Kevin Blighe45k
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Structural variation detection from RNA-seq
indel rna-seq written 21 months ago by Hanan70 • updated 21 months ago by colindaven1.5k
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Deletions, Translocations And Cnv From Rna-Seq
rnaseq indel written 6.1 years ago by kanwarjag970 • updated 22 months ago by Biostar ♦♦ 20
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Tool: Varscan: Variant Detection In Massively Parallel Sequencing Data
indel varscan tool snp written 7.2 years ago by Istvan Albert ♦♦ 80k • updated 23 months ago by AcademicDialysis60
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