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6
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6 follow
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Sequencing index information from BAM
fastq bam index written 20 days ago by trodriguez20110 • updated 19 days ago by swbarnes27.4k
27
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50k
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10 follow
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samtools sorting and indexing
index samtools sort written 2.6 years ago by ggman80 • updated 4 weeks ago by onestop_data160
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1
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85
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1
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File not suitable for fasta index generation.
fasta freebayes index written 5 weeks ago by ja41230 • updated 5 weeks ago by Pierre Lindenbaum126k
1
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131
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1
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Extract all BAM reads that intersect a given region using the BAI index
bai tools bam index written 8 weeks ago by bugmaster0 • updated 8 weeks ago by swbarnes27.4k
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119
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6
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166
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2
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146
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3
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BWA index - is it neccesary?
bwa index written 3 months ago by Hansen_86920 • updated 3 months ago by ATpoint29k
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168
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2
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1
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Counting number of hits of blastn output
makeblastdb database blastn index written 5 months ago by caranlove0 • updated 4 months ago by lieven.sterck6.9k
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242
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BwaMemIndexImageCreator fails to generate reference.img file
gatk reference genome index written 5 months ago by fmail12210 • updated 5 months ago by 7ehuang0
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10
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Make bam index human readable
bai bam index written 4.1 years ago by dariober11k • updated 5 months ago by Ann Loraine50
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275
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0
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3
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3
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434
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8 follow
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Get identical elements and index from 2 Arrays in Perl
perl arrays index written 8 months ago by rebkirl0 • updated 6 months ago by The160
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320
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.fai index in BWA / bowtie / bowtie2 / minimap2
minimap2 bowtie2 bwa bowtie index written 6 months ago by Severus Snape0 • updated 6 months ago by h.mon29k
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BWA mem failing to locate index files
bwa index written 7 months ago by aalith10
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236
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BWA index getting killed
fastq bam bwa index written 7 months ago by abbysue10 • updated 7 months ago by swbarnes27.4k
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316
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Picard error: Sequences at index 0 don't match
genome fastq picard don't match index written 10 months ago by zachariasawaged0 • updated 10 months ago by swbarnes27.4k
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2
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VCF file from DanteLabs Dante Labs does not load in IGV
vcf igv index written 11 months ago by urishab10 • updated 11 months ago by Charles Warden7.6k
5
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728
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11
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7 follow
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how to make a .tbi file of .gtf.gz?
tbi index written 2.2 years ago by KVC_bioinfo410 • updated 11 months ago by Caizhaoqing20
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From BAM to BAI to BIGWIG
bigwig index samtools bai bamcoverage written 12 months ago by raquelgarza9550 • updated 12 months ago by h.mon29k
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6 follow
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2
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1
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371
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Adding unique index or names to merged data frames
merge tcga index snp sequencing written 14 months ago by dodausp130 • updated 14 months ago by benformatics1.4k
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406
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repeatmask fasta file
teelements salmon repeatmask index written 15 months ago by lkianmehr30 • updated 15 months ago by Biostar ♦♦ 20
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2.0k
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6 follow
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Codon Adaptation Index
codon index written 6.1 years ago by tigeradab50 • updated 15 months ago by anamaria30
2
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1
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577
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1
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