Latest
Open
RNA-Seq
ChIP-Seq
SNP
Assembly
Tutorials
Tools
Jobs
Forum
Planet
All »
Home
Log In
Showing: intersect • reset
or   Classic search
<prev • 49 results • page 1 of 2 • next >
1
vote
3
answers
116
views
3
answers
Intersect counts with fragment regions
bedtools R intersect ranges readcounts written 1 day ago by dzisis1986 • 20 • updated 1 day ago by Alex Reynolds ♦ 24k
0
votes
1
answer
93
views
1
answer
Multiple ways to make an IntersectBed on bed file after peak calling : which one is the good one ??
peak calling ngs intersect written 11 days ago by anais1396 • 10 • updated 11 days ago by ATpoint • 4.4k
0
votes
0
answers
126
views
0
answers
how to get intergene coordinates for a single chromosome?
bedtools intersect intergene coordinates written 9 weeks ago by Zee_S • 20
0
votes
1
answer
128
views
1
answer
Clarification on Bedtools Intersect Usage
bedtools intersect samtools mpileup bam written 10 weeks ago by Noam Teyssier • 10 • updated 10 weeks ago by Kevin Blighe ♦ 21k
0
votes
2
answers
324
views
2
answers
intersection, Bed file and VCF.
bedtools vcf intersect orfs variant calling written 3 months ago by jaqx008 • 30
4
votes
1
answer
167
views
1
answer
bedops -u does not work properly
bed bedops intersect written 5 months ago by Ming Tang • 2.3k • updated 5 months ago by Alex Reynolds ♦ 24k
2
votes
4
answers
423
views
4
answers
False output when intersecting methylation data
multiintersect intersect wgbs written 9 months ago by theodore • 40 • updated 8 months ago by Alex Reynolds ♦ 24k
2
votes
1
answer
984
views
1
answer
Bedtools intersect a position in a range
bedtools intersect written 3.0 years ago by christylynn002 • 0 • updated 9 months ago by Biostar ♦♦ 20
0
votes
0
answers
430
views
0
answers
detecting overlapping CNV from 2 algorithms
bedtools intersect r-gada penncnv cnv written 10 months ago by Myosotis1979 • 10
1
vote
1
answer
831
views
1
answer
Intersect multiple VCF files
vcf bedtools intersect vcftools snp written 12 months ago by ciemanek • 70 • updated 12 months ago by Brian Bushnell ♦ 15k
1
vote
0
answers
692
views
0
answers
VCFtools intersect vs. GATK intersect
vctfools gatk intersect snp sequencing written 12 months ago by ciemanek • 70 • updated 12 months ago by Pierre Lindenbaum ♦ 108k
2
votes
1
answer
424
views
1
answer
Getting intersect between three tables of genes in Rstudio
R intersect rstudio written 13 months ago by snar86 • 0 • updated 13 months ago by Santosh Anand • 3.5k
1
vote
1
answer
518
views
1
answer
multiIntersectBed for SNPs, need to compare but not merge intervals
bedtools intersect snp written 17 months ago by Adrian Pelin • 2.1k • updated 17 months ago by Alex Reynolds ♦ 24k
0
votes
0
answers
850
views
0
answers
bedtools intersect + subtract not adding up to original file?
bedtools bed intersect subtract written 21 months ago by asperlea • 0 • updated 21 months ago by harold.smith.tarheel • 4.1k
0
votes
2
answers
859
views
2
answers
COmparing two SNV vcf files using bedtools
vcf bedtools intersect written 2.1 years ago by panbar • 20 • updated 2.1 years ago by jasper1918 • 10
2
votes
2
answers
1.0k
views
2
answers
Prioritize structural variation (SV) callings supported by multiple softwares
sv intersect structural variation written 2.2 years ago by gerrybio2010 • 730 • updated 2.1 years ago by QVINTVS_FABIVS_MAXIMVS • 2.1k
4
votes
1
answer
916
views
1
answer
Histone modification peaks to compare with my ChIP-seq peaks
histone modifications intersect chip-seq written 2.2 years ago by fhassanz • 10 • updated 2.2 years ago by jotan • 1.2k
11
votes
4
answers
1.7k
views
4
answers
Intersect multiple BED files
bed intersect written 2.4 years ago by int11ap1 • 310 • updated 2.4 years ago by Aaronquinlan ♦ 10k
2
votes
1
answer
2.9k
views
1
answer
Bedtools Intersect Error
bedtools intersect error written 2.6 years ago by dally • 160
1
vote
3
answers
2.3k
views
3
answers
How To Pile Up Multiple Bed Files Into 1 File
bed intersect sam bam pileup written 6.1 years ago by Hanfei Sun • 60 • updated 2.7 years ago by Biostar ♦♦ 20
4
votes
1
answer
2.2k
views
1
answer
Merging And De-Duplicating Structural Variant Calls (Bedpe)
intersect structural written 7.0 years ago by Stephane Plaisance • 360 • updated 2.7 years ago by Ming Tang • 2.3k
0
votes
1
answer
1.3k
views
1
answer
vcf files generated from intersection/union of multiple callers
vcf merge intersect union written 2.7 years ago by lheisler.bioinformatics • 0 • updated 2.7 years ago by Zev.Kronenberg ♦ 11k
1
vote
0
answers
860
views
0
answers
bedtools intersect without range
bedtools intersect written 2.8 years ago by christylynn002 • 0
0
votes
0
answers
1.1k
views
0
answers
bedtools intersect -c flag output
bedtools intersect written 2.8 years ago by bruce.moran • 410
7
votes
2
answers
1.3k
views
2
answers
Best to overlap hundreds of BED files to one master BED file?
overlap bed intersect written 2.9 years ago by Ian ♦ 5.2k • updated 2.9 years ago by Alex Reynolds ♦ 24k
2
votes
1
answer
1.9k
views
1
answer
Bedtools intersect with minimum overlap required as a number
bedtools intersect map mapping written 3.1 years ago by AmeenS • 0 • updated 3.1 years ago by PoGibas ♦ 4.7k
6
votes
2
answers
1.9k
views
2
answers
Does multiIntersectBed works with -u and -f parameter?
bedtools intersect bedfiles sequencing written 3.4 years ago by vchris_ngs • 4.5k • updated 3.4 years ago by Aaronquinlan ♦ 10k
3
votes
2
answers
2.0k
views
2
answers
Variant annotation using several .BED files
bedtools annovar intersect annotation written 3.6 years ago by drautuna • 60 • updated 3.6 years ago by Aaronquinlan ♦ 10k
0
votes
1
answer
2.6k
views
1
answer
Bedtools intersect tab and bed files
bedtools bed intersect tab written 3.9 years ago by smartsean • 0 • updated 3.9 years ago by Ram ♦ 15k
8
votes
3
answers
2.1k
views
13 follow
3
answers
How To Intersect A Range With Single Positions
bed intersect written 4.3 years ago by roll • 210 • updated 4.3 years ago by Neilfws ♦ 48k
<prev • 49 results • page 1 of 2 • next >
Recent Votes
Recent Locations • All »
  • London, just now
  • India, 1 minute ago
  • Netherlands, 2 minutes ago
  • Montpellier, 2 minutes ago
Recent Awards • All »
Recent Replies
Content
Help
Access
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.3.0
Traffic: 1234 users visited in the last hour