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2
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97
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What are the best intron splice finder tools?
annotation gene prediction intron eukaryotes written 15 days ago by DNAlias • 10
3
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1
answer
180
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1
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Coordinates for genomic features?
gene utr promoter exon intron written 7 weeks ago by Ankit • 140
1
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0
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136
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0
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Searching for introns within 5'UTRs
gff3 fasta intron 5'utr written 3 months ago by ryan.borotra • 10
8
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2
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841
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7 follow
2
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rRNA decontamination of RNA-Seq reads (tool choice, introns etc)
rrna sormerna intron bbsuite rna-seq written 11 months ago by Anand Rao • 320
0
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0
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181
views
0
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Noncoding annotations for WGS?
annotation noncoding intron written 10 months ago by syntax • 60
0
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3
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945
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5 follow
3
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Intron and exon coordinates of all genes from Hg19
gene cordinates intron exon written 10 months ago by yliueagle • 220 • updated 10 months ago by vkkodali • 2.1k
1
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234
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Defining exons, UTRs, introns and intergenic regions using "overlap" in Ensemble REST API
genomic coordinates exon ensemble rest api intron written 11 months ago by Maria • 10
1
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1
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4.1k
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1
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How The Non-Canonical Intron Splice Sites Came Out?
intron written 6.8 years ago by bill-zt • 50 • updated 16 months ago by Biostar ♦♦ 20
1
vote
1
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366
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1
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Variants in Exon or Intron
exon variant intron written 17 months ago by zakkaknadine • 10 • updated 17 months ago by shawn.w.foley • 1.2k
0
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1
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842
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1
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How does an intron variant affect the overall gene expression?
gene intron snp written 19 months ago by vahid.atabaigi • 0 • updated 19 months ago by pltbiotech_tkarthi • 180
1
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1
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1.1k
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5 follow
1
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How to extract intronic regions from a Genbank file?
genome python intron extract written 22 months ago by Evergreen • 0 • updated 21 months ago by Alex Reynolds ♦ 31k
5
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2
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1.1k
views
2
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Finding exons and introns sequences
genome ensembl sequence exon intron written 2.0 years ago by elisheva • 100 • updated 24 months ago by vkkodali • 2.1k
0
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1
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522
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1
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Tools to construct gene model
domain intron gene model exon written 2.2 years ago by MAPK • 1.6k • updated 2.2 years ago by Kevin Blighe ♦ 66k
0
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887
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gene predicted by GeneWise
genewise gene prediction intron written 2.7 years ago by xiachujing • 0
5
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2
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3.7k
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7 follow
2
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Get Introns from a gft annotation file
intron rna-seq written 3.6 years ago by xd_d • 100 • updated 2.7 years ago by Saber HQ • 40
4
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1
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1.9k
views
1
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Bulk download introns, exons, and UTR regions from Ensembl for gene prediction training set
annotation sequence intron exon ensembl written 2.8 years ago by Katherine Huang • 0 • updated 2.8 years ago by Brian Gudenas • 90
3
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3
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5.3k
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6 follow
3
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Any tools to quantify intron retention in RNAseq data?
rnaseq R intron retention rna-seq written 6.5 years ago by lkmklsmn • 930 • updated 2.8 years ago by lhdcsu • 30
2
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1
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2.1k
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6 follow
1
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Intron size from gtf/gff file ?
annotation intron written 2.9 years ago by Picasa • 560 • updated 2.9 years ago by Hussain Ather • 940
1
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1
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1.1k
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1
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Intronic Variant Filtering
intron snp variantcalling written 3.3 years ago by cvu • 170 • updated 3.3 years ago by Samuel Brady • 320
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1.0k
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0
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How to splice introne sequences for each transcript.
genome bedtools sequence intron fasta written 3.5 years ago by Tim Padvitski • 0 • updated 3.5 years ago by WouterDeCoster ♦ 44k
4
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1
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2.4k
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1
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Trendline Of Chipseq Read Values In Intron Regions
R intron chipseq written 7.7 years ago by daniel.soronellas • 330 • updated 3.5 years ago by Biostar ♦♦ 20
1
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0
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985
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0
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Get introns in bam format from alignment reads result
intron rna-seq written 3.6 years ago by xd_d • 100
0
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1
answer
803
views
1
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Help me with my GFFex results
gff intron intergenic written 4.2 years ago by elfkatzenbr • 0 • updated 3.8 years ago by Biostar ♦♦ 20
1
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0
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2.3k
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0
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How to parse GFF3 file to get introns number and length from CDS coordinates?
gene gff3 intron python written 3.8 years ago by organizacja7 • 0
2
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3
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1.8k
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3
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Enhancers in Introns
gene enhancer intron human written 4.1 years ago by kyeemon7 • 0 • updated 4.1 years ago by ajsn6c • 0
6
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2
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1.3k
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2
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How to know intron lenghts
intron star rna-seq written 4.1 years ago by jmramos.bio • 10 • updated 4.1 years ago by i.sudbery ♦ 9.4k
3
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3
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1.6k
views
3
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Downloading all introns from Ensembl for Grch37
ensembl intron introns homo sapiens perl api written 4.3 years ago by mmacd • 20 • updated 4.3 years ago by igor ♦ 11k
7
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0
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1.5k
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findings start and stop position of a intron
gene snps position plink intron written 4.4 years ago by avari • 100
5
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1
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2.1k
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1
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Trying to get a distribution of Exon lengths and Intron lengths.
gene ensembl sequence exon intron written 4.4 years ago by remi.b.md • 60
8
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3
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1.7k
views
3
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Detecting a small set of given Intron-Exon junctions in a RNA-Seq dataset
exon intron rna-seq junction written 4.5 years ago by Pierre Lindenbaum ♦ 131k • updated 4.5 years ago by Malachi Griffith ♦ 18k
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