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Intron extraction with Biopython.
intron extract biopython genbank feature written 2 days ago by Evergreen • 0 • updated 2 days ago by finswimmer ♦ 8.9k
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158
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How to extract intronic regions from a Genbank file?
genome python intron extract written 23 days ago by Evergreen • 0
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2
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2
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Finding exons and introns sequences
genome ensembl sequence exon intron written 12 weeks ago by elisheva • 70 • updated 11 weeks ago by vkkodali • 870
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1
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190
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1
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Tools to construct gene model
domain intron gene model exon written 5 months ago by MAPK • 1.3k • updated 5 months ago by Kevin Blighe ♦ 35k
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379
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gene predicted by GeneWise
genewise gene prediction intron written 11 months ago by xiachujing • 0
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2
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2
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Get Introns from a gft annotation file
intron rna-seq written 22 months ago by xd_d • 90 • updated 11 months ago by Saber HQ • 0
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1
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Bulk download introns, exons, and UTR regions from Ensembl for gene prediction training set
annotation sequence intron exon ensembl written 12 months ago by Katherine Huang • 0 • updated 12 months ago by Brian Gudenas • 90
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3
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6 follow
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Any tools to quantify intron retention in RNAseq data?
rnaseq R intron retention rna-seq written 4.7 years ago by lkmklsmn • 860 • updated 12 months ago by lhdcsu • 10
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1
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Intron size from gtf/gff file ?
annotation intron written 14 months ago by Picasa • 390 • updated 14 months ago by Hussain Ather • 890
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1
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605
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1
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Intronic Variant Filtering
intron snp variantcalling written 18 months ago by cvu • 120 • updated 18 months ago by Samuel Brady • 280
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How to splice introne sequences for each transcript.
genome bedtools sequence intron fasta written 20 months ago by Tim Padvitski • 0 • updated 20 months ago by WouterDeCoster ♦ 36k
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1
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2.0k
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1
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Trendline Of Chipseq Read Values In Intron Regions
R intron chipseq written 6.0 years ago by daniel.soronellas • 330 • updated 20 months ago by Biostar ♦♦ 20
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556
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Get introns in bam format from alignment reads result
intron rna-seq written 22 months ago by xd_d • 90
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1
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596
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Help me with my GFFex results
gff intron intergenic written 2.5 years ago by elfkatzenbr • 0 • updated 24 months ago by Biostar ♦♦ 20
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How to parse GFF3 file to get introns number and length from CDS coordinates?
gene gff3 intron python written 2.0 years ago by organizacja7 • 0
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How The Non-Canonical Intron Splice Sites Came Out?
intron written 5.1 years ago by bill-zt • 40 • updated 2.1 years ago by Biostar ♦♦ 20
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3
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1.3k
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3
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Enhancers in Introns
gene enhancer intron human written 2.3 years ago by kyeemon7 • 0 • updated 2.3 years ago by ajsn6c • 0
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How to know intron lenghts
intron star rna-seq written 2.3 years ago by jmramos.bio • 10 • updated 2.3 years ago by i.sudbery ♦ 3.1k
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Downloading all introns from Ensembl for Grch37
ensembl intron introns homo sapiens perl api written 2.5 years ago by mmacd • 20 • updated 2.5 years ago by igor ♦ 7.2k
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findings start and stop position of a intron
gene snps position plink intron written 2.6 years ago by avari • 70
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1
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Trying to get a distribution of Exon lengths and Intron lengths.
gene ensembl sequence exon intron written 2.6 years ago by remi.b.md • 60
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Detecting a small set of given Intron-Exon junctions in a RNA-Seq dataset
exon intron rna-seq junction written 2.7 years ago by Pierre Lindenbaum ♦ 116k • updated 2.7 years ago by Malachi Griffith ♦ 17k
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1
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Genome Music Evalutation Of Non-Coding / Intergenic Regions
genome intron music written 5.4 years ago by DoubleD • 130 • updated 2.7 years ago by Biostar ♦♦ 20
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4.9k
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How To Download All The Introns From Ucsc
fasta assembly intron download ucsc written 7.1 years ago by Anima Mundi • 2.4k • updated 2.8 years ago by Biostar ♦♦ 20
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3
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mm9 genomic annotation UTR, Codon, Promoter
3'utr promoter 5'utr exons intron written 4.0 years ago by kanwarjag • 910 • updated 2.9 years ago by cooleel • 0
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1
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5 follow
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Working Out The Number Of Introns In A Gene Given The Number Of Exons
intron written 6.7 years ago by garyfox111 • 0 • updated 3.0 years ago by Biostar ♦♦ 20
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1
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How to find intron co-ordinates from the gff file?
bedtools gff open intron written 3.2 years ago by Chirag Parsania • 1.3k • updated 3.2 years ago by Devon Ryan ♦ 87k
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5
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15 follow
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Bed File With Introns Only
ucsc bed intron browser written 7.3 years ago by Pfs • 490 • updated 3.3 years ago by #### • 170
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4
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6 follow
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Possible Reasons For Intronic Snp Coming Out Top Of Gwas.
gwas intron snp written 7.5 years ago by Paul • 750 • updated 3.3 years ago by Prash • 20
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how to query ensembl sql database - to check if a snp (name = rs...) is in an intron ?
ensembl intron mysql snp written 3.7 years ago by pinikoma • 0 • updated 3.7 years ago by Emily_Ensembl ♦ 16k
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