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<prev • 48 results • page 1 of 2 • next >
3
votes
3
answers
208
views
6 follow
3
answers
Relative transcript expression
transcript expression rna-seq isoform written 21 days ago by Govardhan Anande • 130 • updated 17 days ago by WouterDeCoster ♦ 29k
0
votes
0
answers
1.4k
views
0
answers
Calculating Distance To Polya Site For Each Exon For Given Gene.Name
data isoform ucsc written 5.7 years ago by Puriney • 330 • updated 7 months ago by Biostar ♦♦ 20
1
vote
1
answer
428
views
1
answer
Finding isoform in RNA-seq data
isoform es splice variant human rna-seq written 7 months ago by mari.felix5723 • 0 • updated 7 months ago by Devon Ryan ♦ 80k
1
vote
0
answers
904
views
0
answers
recognize known isoform from transcript mapping
alignment isoform pacbio written 3.3 years ago by ghbore • 0 • updated 9 months ago by Biostar ♦♦ 20
1
vote
0
answers
430
views
0
answers
How to access up-to-date exon data from GTEx project
rnaseq exon gtex isoform tissue-specific written 10 months ago by vlrieg • 10
2
votes
0
answers
368
views
0
answers
two different UCSC isoforms for the same transcript
ucsc rna-seq isoform tgca written 11 months ago by donegal77 • 0
6
votes
3
answers
3.0k
views
7 follow
3
answers
Identifying Genes That Express Different Isoforms In Cancer Vs Normal Rna-Seq Data
splicing expression isoform written 5.9 years ago by Sahel • 250 • updated 12 months ago by kristoffer.vittingseerup • 470
5
votes
4
answers
908
views
4
answers
Differential isoform expression analyses
transcript expression rna-seq isoform written 20 months ago by rmf • 270 • updated 12 months ago by kristoffer.vittingseerup • 470
1
vote
0
answers
522
views
0
answers
What is the best tool for isoform function prediction?
prediction rna-seq isoform written 15 months ago by Fill • 70 • updated 13 months ago by Biostar ♦♦ 20
13
votes
2
answers
4.9k
views
11 follow
2
answers
How to extract the longest isoform from multi fasta file
fasta perl extract isoform python written 3.9 years ago by jon.brate • 150 • updated 13 months ago by Biostar ♦♦ 20
1
vote
1
answer
687
views
1
answer
Single-cell RNA-seq normalization with ERCC for isoform analysis
single-cell rna-seq normalization rna-seq isoform written 18 months ago by garyhokawai • 20 • updated 18 months ago by Mike • 980
0
votes
0
answers
1.4k
views
0
answers
Error when running MISO
splicing miso rna-seq isoform written 2.4 years ago by onspotproductions • 120 • updated 22 months ago by Yousef • 0
0
votes
2
answers
584
views
2
answers
New isoform discovery with paired end reads across different exons
paired end rna-seq isoform written 23 months ago by thomasterTW • 20 • updated 23 months ago by EagleEye • 5.3k
0
votes
0
answers
497
views
0
answers
MISO :: Filtered out "n" read pairs that were on same strand
splicing next-gen rna-seq isoform sequencing written 2.1 years ago by Govardhan Anande • 130
7
votes
1
answer
2.5k
views
1
answer
Hisat2 on multiple paired-end input
genome read rna-seq isoform sequencing written 2.1 years ago by dovah • 30 • updated 2.1 years ago by Devon Ryan ♦ 80k
1
vote
1
answer
1.9k
views
1
answer
Identification of major isoform per gene from RNA-Seq
cufflinks major isoform rna-seq written 3.1 years ago by Leszek ♦ 3.9k
4
votes
0
answers
855
views
0
answers
TERT isoform discrepancies UCSC vs Ensembl
gene ensembl uniprot isoform ucsc written 2.3 years ago by floris.barthel • 10 • updated 2.3 years ago by Emily_Ensembl ♦ 15k
2
votes
1
answer
803
views
1
answer
PE or SE reads for alternative splicing / isoform quantification?
splicing cufflinks cuffdiff rna-seq isoform written 2.3 years ago by nevev • 90 • updated 2.3 years ago by Brian Bushnell ♦ 15k
2
votes
1
answer
716
views
1
answer
ensemble illumina tissues aligned rnaSeq
gene bioinformatics alignment rna-seq isoform written 2.6 years ago by fk566938 • 10 • updated 2.6 years ago by mkulecka • 300
3
votes
3
answers
2.2k
views
3
answers
Finding isoform expression in RNA-Seq
tophat cufflinks rna-seq isoform written 3.4 years ago by Whoknows • 640 • updated 2.7 years ago by andrew.j.skelton73 ♦ 5.0k
9
votes
2
answers
1.4k
views
2
answers
differential expression at transcript level with paired samples
paired samples rna-seq isoform written 2.9 years ago by mjg • 20 • updated 2.8 years ago by lakigigar • 190
2
votes
1
answer
1.9k
views
1
answer
In TCGA RNA-seq exon specific data, why not all the exons of a particular isoform have similar read (RPKM)?
genome next-gen rna-seq isoform written 2.9 years ago by ruhulmb • 0 • updated 2.9 years ago by Devon Ryan ♦ 80k
4
votes
1
answer
1.6k
views
1
answer
Are Novel Junctions Only Give Novel Transcripts?
tophat rna isoform written 6.3 years ago by Ngsnewbie • 360 • updated 3.0 years ago by Biostar ♦♦ 20
2
votes
2
answers
1.5k
views
2
answers
How to get the coding sequence of each isoform of a gene?
sequence isoform written 3.0 years ago by bounlu • 130 • updated 3.0 years ago by Emily_Ensembl ♦ 15k
3
votes
0
answers
1.1k
views
0
answers
Any advice on how to do isoform quantification?
rna-seq isoform transcriptome written 3.0 years ago by cyril-cros • 800
0
votes
1
answer
1.1k
views
1
answer
Aligning UniProt Canonical Sequences With Their Isoform Sequences
sequence canonical align isoform uniprot written 3.2 years ago by pwg46 • 330 • updated 3.1 years ago by Elisabeth Gasteiger • 1.4k
1
vote
0
answers
1.2k
views
0
answers
AUGUSTUS principal isoform
augustus principal isoform isoform written 3.4 years ago by jomaco • 180
2
votes
1
answer
1.6k
views
1
answer
Fusion Isoform Quantification
fusion isoform written 4.2 years ago by Nicolas Rosewick • 6.3k • updated 3.7 years ago by Manvendra Singh • 2.0k
64
votes
4
answers
11k
views
11 follow
4
answers
How Are Rna-Seq Transcripts Assigned?
cufflinks rna isoform rna-seq written 6.4 years ago by Dave Bridges • 1.3k • updated 3.9 years ago by Malachi Griffith ♦ 16k
2
votes
2
answers
1.7k
views
5 follow
2
answers
Question about UniProt Isoforms
ensembl enst uniprot isoform written 3.9 years ago by pwg46 • 330 • updated 3.9 years ago by cdsouthan • 1.8k
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