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<prev • 49 results • page 1 of 2 • next >
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Identifying 5p and 3p in miRNA isoform expression data from TCGA for feature selection
data processing tcga microrna isoform mirna written 12 weeks ago by jiaqiwu • 0
3
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3
answers
384
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6 follow
3
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Relative transcript expression
transcript expression rna-seq isoform written 7 months ago by Govardhan Anande • 130 • updated 7 months ago by WouterDeCoster ♦ 36k
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Calculating Distance To Polya Site For Each Exon For Given Gene.Name
data isoform ucsc written 6.3 years ago by Puriney • 330 • updated 14 months ago by Biostar ♦♦ 20
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1
answer
613
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1
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Finding isoform in RNA-seq data
isoform es splice variant human rna-seq written 14 months ago by mari.felix5723 • 10 • updated 14 months ago by Devon Ryan ♦ 87k
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1.0k
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recognize known isoform from transcript mapping
alignment isoform pacbio written 3.8 years ago by ghbore • 0 • updated 16 months ago by Biostar ♦♦ 20
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587
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How to access up-to-date exon data from GTEx project
rnaseq exon gtex isoform tissue-specific written 17 months ago by vlrieg • 10
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526
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two different UCSC isoforms for the same transcript
ucsc rna-seq isoform tgca written 18 months ago by donegal77 • 0
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3
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3.2k
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7 follow
3
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Identifying Genes That Express Different Isoforms In Cancer Vs Normal Rna-Seq Data
splicing expression isoform written 6.5 years ago by Sahel • 250 • updated 19 months ago by kristoffer.vittingseerup • 1.2k
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4
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1.2k
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4
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Differential isoform expression analyses
transcript expression rna-seq isoform written 2.3 years ago by rmf • 500 • updated 19 months ago by kristoffer.vittingseerup • 1.2k
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759
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What is the best tool for isoform function prediction?
prediction rna-seq isoform written 22 months ago by Fill • 70 • updated 20 months ago by Biostar ♦♦ 20
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2
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5.6k
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11 follow
2
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How to extract the longest isoform from multi fasta file
fasta perl extract isoform python written 4.5 years ago by jon.brate • 200 • updated 20 months ago by Biostar ♦♦ 20
2
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1
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867
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1
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Single-cell RNA-seq normalization with ERCC for isoform analysis
single-cell rna-seq normalization rna-seq isoform written 2.1 years ago by garyhokawai • 30 • updated 2.1 years ago by Mike • 1.1k
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1.8k
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Error when running MISO
splicing miso rna-seq isoform written 3.0 years ago by onspotproductions • 120 • updated 2.4 years ago by Yousef • 0
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2
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746
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2
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New isoform discovery with paired end reads across different exons
paired end rna-seq isoform written 2.5 years ago by thomasterTW • 20 • updated 2.5 years ago by EagleEye ♦ 6.1k
0
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598
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0
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MISO :: Filtered out "n" read pairs that were on same strand
splicing next-gen rna-seq isoform sequencing written 2.6 years ago by Govardhan Anande • 130
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1
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3.0k
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1
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Hisat2 on multiple paired-end input
genome read rna-seq isoform sequencing written 2.7 years ago by dovah • 30 • updated 2.7 years ago by Devon Ryan ♦ 87k
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1
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2.2k
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1
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Identification of major isoform per gene from RNA-Seq
cufflinks major isoform rna-seq written 3.7 years ago by Leszek ♦ 4.0k
4
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1.0k
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0
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TERT isoform discrepancies UCSC vs Ensembl
gene ensembl uniprot isoform ucsc written 2.8 years ago by floris.barthel • 20 • updated 2.8 years ago by Emily_Ensembl ♦ 16k
2
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1
answer
987
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1
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PE or SE reads for alternative splicing / isoform quantification?
splicing cufflinks cuffdiff rna-seq isoform written 2.9 years ago by nevev • 90 • updated 2.9 years ago by Brian Bushnell ♦ 16k
2
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1
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802
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1
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ensemble illumina tissues aligned rnaSeq
gene bioinformatics alignment rna-seq isoform written 3.2 years ago by fk566938 • 10 • updated 3.2 years ago by mkulecka • 300
3
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3
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2.6k
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3
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Finding isoform expression in RNA-Seq
tophat cufflinks rna-seq isoform written 4.0 years ago by Whoknows • 670 • updated 3.3 years ago by andrew.j.skelton73 ♦ 5.5k
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2
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1.5k
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2
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differential expression at transcript level with paired samples
paired samples rna-seq isoform written 3.4 years ago by mjg • 20 • updated 3.4 years ago by lakigigar • 210
2
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1
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2.1k
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1
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In TCGA RNA-seq exon specific data, why not all the exons of a particular isoform have similar read (RPKM)?
genome next-gen rna-seq isoform written 3.5 years ago by ruhulmb • 0 • updated 3.5 years ago by Devon Ryan ♦ 87k
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1
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1.8k
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1
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Are Novel Junctions Only Give Novel Transcripts?
tophat rna isoform written 6.8 years ago by Ngsnewbie • 360 • updated 3.6 years ago by Biostar ♦♦ 20
2
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2
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1.9k
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2
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How to get the coding sequence of each isoform of a gene?
sequence isoform written 3.6 years ago by bounlu • 170 • updated 3.6 years ago by Emily_Ensembl ♦ 16k
3
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0
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1.3k
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Any advice on how to do isoform quantification?
rna-seq isoform transcriptome written 3.6 years ago by cyril-cros • 840
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1
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1.3k
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1
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Aligning UniProt Canonical Sequences With Their Isoform Sequences
sequence canonical align isoform uniprot written 3.7 years ago by pwg46 • 340 • updated 3.7 years ago by Elisabeth Gasteiger • 1.5k
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1.3k
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0
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AUGUSTUS principal isoform
augustus principal isoform isoform written 4.0 years ago by jomaco • 190
2
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1
answer
1.8k
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1
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Fusion Isoform Quantification
fusion isoform written 4.8 years ago by Nicolas Rosewick ♦ 7.2k • updated 4.3 years ago by Manvendra Singh • 2.0k
64
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4
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12k
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11 follow
4
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How Are Rna-Seq Transcripts Assigned?
cufflinks rna isoform rna-seq written 7.0 years ago by Dave Bridges • 1.3k • updated 4.5 years ago by Malachi Griffith ♦ 17k
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