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<prev • 56 results • page 1 of 2 • next >
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Download all isoforms
sequence isoform written 28 days ago by sbdk • 60
1
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1
answer
632
views
5 follow
1
answer
Some problems with DEXSEQ analyse
dexseq expression rna-seq isoform written 13 months ago by darbinator • 220 • updated 4 months ago by kristoffer.vittingseerup • 3.0k
1
vote
2
answers
354
views
2
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select longest isoform from RefSeq proteome fasta
fasta proteome refseq isoform written 8 months ago by wd • 0 • updated 5 months ago by vkkodali • 1.9k
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0
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301
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inconsistent results of rsem quantification
rsem isoform rna-seq written 9 months ago by gnilihzeux • 0 • updated 7 months ago by Biostar ♦♦ 20
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0
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209
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0
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Isoform level RNA-seq analyses
rna-seq isoform written 8 months ago by BPors • 40
1
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1
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664
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1
answer
STAR+HTSeq gene counts vs STAR+RSEM genes and how to combine isoforms to get the gene counts?
htseq gene star isoform rsem written 9 months ago by jennygenome • 0 • updated 9 months ago by swbarnes2 ♦ 7.5k
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1
answer
2.1k
views
1
answer
Fusion Isoform Quantification
fusion isoform written 6.0 years ago by Nicolas Rosewick ♦ 8.7k • updated 10 months ago by Biostar ♦♦ 20
2
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1
answer
1.0k
views
1
answer
How to distinguish if a gene is a paralogue or an isoform?
gene paralogue isoform written 13 months ago by DNAngel • 40 • updated 13 months ago by kashiff007 • 130
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626
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0
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Identifying 5p and 3p in miRNA isoform expression data from TCGA for feature selection
data processing tcga microrna isoform mirna written 17 months ago by jiaqiwu • 0
3
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3
answers
713
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6 follow
3
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Relative transcript expression
transcript expression rna-seq isoform written 22 months ago by Govardhan Anande • 130 • updated 22 months ago by WouterDeCoster ♦ 43k
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0
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1.8k
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0
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Calculating Distance To Polya Site For Each Exon For Given Gene.Name
data isoform ucsc written 7.5 years ago by Puriney • 330 • updated 2.4 years ago by Biostar ♦♦ 20
1
vote
1
answer
969
views
1
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Finding isoform in RNA-seq data
isoform es splice variant human rna-seq written 2.4 years ago by mari.felix5723 • 10 • updated 2.4 years ago by Devon Ryan ♦ 94k
1
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0
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1.3k
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0
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recognize known isoform from transcript mapping
alignment isoform pacbio written 5.0 years ago by ghbore • 0 • updated 2.6 years ago by Biostar ♦♦ 20
1
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0
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908
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0
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How to access up-to-date exon data from GTEx project
rnaseq exon gtex isoform tissue-specific written 2.6 years ago by vlrieg • 10
2
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0
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714
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0
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two different UCSC isoforms for the same transcript
ucsc rna-seq isoform tgca written 2.7 years ago by donegal77 • 0
6
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3
answers
3.7k
views
7 follow
3
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Identifying Genes That Express Different Isoforms In Cancer Vs Normal Rna-Seq Data
splicing expression isoform written 7.7 years ago by Sahel • 250 • updated 2.8 years ago by kristoffer.vittingseerup • 3.0k
5
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4
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1.6k
views
4
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Differential isoform expression analyses
transcript expression rna-seq isoform written 3.5 years ago by rmf • 920 • updated 2.8 years ago by kristoffer.vittingseerup • 3.0k
1
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1.2k
views
0
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What is the best tool for isoform function prediction?
prediction rna-seq isoform written 3.0 years ago by Fill • 70 • updated 2.9 years ago by Biostar ♦♦ 20
15
votes
2
answers
7.2k
views
12 follow
2
answers
How to extract the longest isoform from multi fasta file
fasta perl extract isoform python written 5.7 years ago by jon.brate • 250 • updated 2.9 years ago by Biostar ♦♦ 20
2
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1
answer
1.2k
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1
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Single-cell RNA-seq normalization with ERCC for isoform analysis
single-cell rna-seq normalization rna-seq isoform written 3.3 years ago by garyhokawai • 30 • updated 3.3 years ago by Mike • 1.5k
0
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0
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2.3k
views
0
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Error when running MISO
splicing miso rna-seq isoform written 4.2 years ago by onspotproductions • 140 • updated 3.6 years ago by joe • 0
0
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2
answers
976
views
2
answers
New isoform discovery with paired end reads across different exons
paired end rna-seq isoform written 3.7 years ago by thomasterTW • 20 • updated 3.7 years ago by EagleEye ♦ 6.6k
0
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0
answers
834
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0
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MISO :: Filtered out "n" read pairs that were on same strand
splicing next-gen rna-seq isoform sequencing written 3.8 years ago by Govardhan Anande • 130
7
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1
answer
3.9k
views
1
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Hisat2 on multiple paired-end input
genome read rna-seq isoform sequencing written 3.9 years ago by dovah • 30 • updated 3.9 years ago by Devon Ryan ♦ 94k
1
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1
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2.6k
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1
answer
Identification of major isoform per gene from RNA-Seq
cufflinks major isoform rna-seq written 4.9 years ago by Leszek ♦ 4.0k
4
votes
0
answers
1.4k
views
0
answers
TERT isoform discrepancies UCSC vs Ensembl
gene ensembl uniprot isoform ucsc written 4.0 years ago by floris.barthel • 40 • updated 4.0 years ago by Emily_Ensembl ♦ 20k
2
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1
answer
1.4k
views
1
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PE or SE reads for alternative splicing / isoform quantification?
splicing cufflinks cuffdiff rna-seq isoform written 4.1 years ago by nevev • 90 • updated 4.1 years ago by Brian Bushnell ♦ 17k
2
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1
answer
973
views
1
answer
ensemble illumina tissues aligned rnaSeq
gene bioinformatics alignment rna-seq isoform written 4.4 years ago by fk566938 • 10 • updated 4.4 years ago by mkulecka • 310
3
votes
2
answers
3.2k
views
2
answers
Finding isoform expression in RNA-Seq
tophat cufflinks rna-seq isoform written 5.2 years ago by Whoknows • 770 • updated 4.5 years ago by andrew.j.skelton73 ♦ 5.9k
9
votes
2
answers
1.9k
views
2
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differential expression at transcript level with paired samples
paired samples rna-seq isoform written 4.6 years ago by mjg • 20 • updated 4.6 years ago by Lior Pachter • 520
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