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<prev • 62 results • page 1 of 3 • next >
2
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105
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Data curation approach for isolating interaction data from publications.
gene data curation isoform written 10 weeks ago by imaparna27 • 0
0
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0
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169
views
0
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How represent isoforms in different tracks in a genome browser?
reads alignment salmon rna-seq isoform written 3 months ago by Bardt9 • 0 • updated 3 months ago by Biostar ♦♦ 20
0
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0
answers
144
views
0
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DEXSeq for isoform data
dexseq rna-seq isoform written 3 months ago by inah • 0
0
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0
answers
190
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0
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HISAT2/StringTie/Ballgown for Novel Transcript Isoform Differential Expression
ballgown hisat2 stringtie isoform rna-seq written 3 months ago by ra711 • 0 • updated 3 months ago by GenoMax ♦ 94k
4
votes
1
answer
287
views
1
answer
How to retain the row or line with longest protein isoform from csv table
linux command python csv protein isoform written 6 months ago by jamesdong • 0
1
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3
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285
views
3
answers
How reliable are the ensembl transcript isoforms?
ensembl rna-seq isoform written 9 months ago by simplitia • 40 • updated 9 months ago by Astrid_Ensembl • 330
0
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0
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237
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0
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Download all isoforms
sequence isoform written 10 months ago by sbdk • 60
1
vote
1
answer
1.1k
views
5 follow
1
answer
Some problems with DEXSEQ analyse
dexseq expression rna-seq isoform written 22 months ago by darbinator • 230 • updated 13 months ago by kristoffer.vittingseerup • 3.5k
1
vote
2
answers
810
views
2
answers
select longest isoform from RefSeq proteome fasta
fasta proteome refseq isoform written 18 months ago by wd • 0 • updated 15 months ago by vkkodali • 2.4k
0
votes
0
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441
views
0
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inconsistent results of rsem quantification
rsem isoform rna-seq written 18 months ago by gnilihzeux • 0 • updated 17 months ago by Biostar ♦♦ 20
0
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0
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314
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0
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Isoform level RNA-seq analyses
rna-seq isoform written 18 months ago by BPors • 40
1
vote
1
answer
1.5k
views
1
answer
STAR+HTSeq gene counts vs STAR+RSEM genes and how to combine isoforms to get the gene counts?
htseq gene star isoform rsem written 19 months ago by jennygenome • 0 • updated 19 months ago by swbarnes2 ♦ 9.3k
2
votes
1
answer
2.3k
views
1
answer
Fusion Isoform Quantification
fusion isoform written 6.8 years ago by Nicolas Rosewick ♦ 9.3k • updated 20 months ago by Biostar ♦♦ 20
3
votes
1
answer
1.8k
views
5 follow
1
answer
How to distinguish if a gene is a paralogue or an isoform?
gene paralogue isoform written 23 months ago by DNAngel • 90 • updated 23 months ago by kashiff007 • 130
1
vote
0
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928
views
0
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Identifying 5p and 3p in miRNA isoform expression data from TCGA for feature selection
data processing tcga microrna isoform mirna written 2.2 years ago by jiaqiwu • 10
3
votes
3
answers
877
views
6 follow
3
answers
Relative transcript expression
transcript expression rna-seq isoform written 2.6 years ago by Govardhan Anande • 130 • updated 2.6 years ago by WouterDeCoster ♦ 45k
0
votes
0
answers
1.9k
views
0
answers
Calculating Distance To Polya Site For Each Exon For Given Gene.Name
data isoform ucsc written 8.3 years ago by Puriney • 330 • updated 3.2 years ago by Biostar ♦♦ 20
1
vote
1
answer
1.2k
views
1
answer
Finding isoform in RNA-seq data
isoform es splice variant human rna-seq written 3.2 years ago by mari.felix5723 • 10 • updated 3.2 years ago by Devon Ryan ♦ 98k
1
vote
0
answers
1.4k
views
0
answers
recognize known isoform from transcript mapping
alignment isoform pacbio written 5.8 years ago by ghbore • 0 • updated 3.4 years ago by Biostar ♦♦ 20
1
vote
0
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1.0k
views
0
answers
How to access up-to-date exon data from GTEx project
rnaseq exon gtex isoform tissue-specific written 3.4 years ago by vlrieg • 10
2
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0
answers
799
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0
answers
two different UCSC isoforms for the same transcript
ucsc rna-seq isoform tgca written 3.5 years ago by donegal77 • 0
6
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3
answers
4.0k
views
7 follow
3
answers
Identifying Genes That Express Different Isoforms In Cancer Vs Normal Rna-Seq Data
splicing expression isoform written 8.5 years ago by Sahel • 260 • updated 3.6 years ago by kristoffer.vittingseerup • 3.5k
5
votes
4
answers
1.9k
views
4
answers
Differential isoform expression analyses
transcript expression rna-seq isoform written 4.3 years ago by rmf • 1.0k • updated 3.6 years ago by kristoffer.vittingseerup • 3.5k
1
vote
0
answers
1.5k
views
0
answers
What is the best tool for isoform function prediction?
prediction rna-seq isoform written 3.8 years ago by Fill • 70 • updated 3.7 years ago by Biostar ♦♦ 20
16
votes
2
answers
8.3k
views
13 follow
2
answers
How to extract the longest isoform from multi fasta file
fasta perl extract isoform python written 6.5 years ago by jon.brate • 250 • updated 3.7 years ago by Biostar ♦♦ 20
2
votes
1
answer
1.4k
views
1
answer
Single-cell RNA-seq normalization with ERCC for isoform analysis
single-cell rna-seq normalization rna-seq isoform written 4.1 years ago by garyhokawai • 30 • updated 4.1 years ago by Mike • 1.7k
0
votes
0
answers
2.6k
views
0
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Error when running MISO
splicing miso rna-seq isoform written 4.9 years ago by onspotproductions • 140 • updated 4.4 years ago by joe • 0
0
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2
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1.1k
views
2
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New isoform discovery with paired end reads across different exons
paired end rna-seq isoform written 4.5 years ago by thomasterTW • 20 • updated 4.5 years ago by EagleEye ♦ 6.7k
0
votes
0
answers
940
views
0
answers
MISO :: Filtered out "n" read pairs that were on same strand
splicing next-gen rna-seq isoform sequencing written 4.6 years ago by Govardhan Anande • 130
7
votes
1
answer
4.5k
views
1
answer
Hisat2 on multiple paired-end input
genome read rna-seq isoform sequencing written 4.7 years ago by dovah • 30 • updated 4.7 years ago by Devon Ryan ♦ 98k
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