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written 8.0 years ago by
Andra Waagmeester ♦ 3.2k
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Job:
Bioinformatics Scientist, Scientific Data Curator at Computercraft (NCBI/NIH) in Bethesda, MD, USA
written 5 weeks ago by
jyu • 10
Recent Votes
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Recent Replies
-
C: An error message while installing gromacs on windows 10 (Linux bash shell, ubunt by
genomax ♦ 63k
That is not how you execute programs. You should just do `$ /usr/local/gromacs/bin/GMXRC your_com...
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C: An error message while installing gromacs on windows 10 (Linux bash shell, ubunt by
DS • 0
Thank you for your answer. I successfully installed but I couldn't execute it. Could you hel...
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C: How to analyze RNAseq data with two/multiple treatment groups and each subject h by
Kevin Blighe ♦ 39k
Cool. The model may then simply be `~ PatientID + treatment`. This model is then effectively a pa...
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A: RNAseq sample never as A in last base by
swbarnes2 ♦ 4.9k
I noticed that before, but not with RNAseq. It was a kind of artificial set up, where the sequen...
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C: RMBlast install error by
xhfeng0307 • 0
Thanks for your answer, I will try anaconda.
-
C: Ensembl Biomart : One Ensembl transcript ID for several UniprotKB ID by
genomax ♦ 63k
This gene has [multiple transcripts][1] and Uniprot seems to assign them with unique ID's. @Emi...
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A: Merge vcf files with multiple samples into one vcf with all variants by
Renesh • 1.5k
Check this link if you want to merge multiple vcf files https://reneshbedre.github.io/blog/mergev...
-
A: How to merge vcf files with different variants but same samples? by
Renesh • 1.5k
Check this link to merge vcf files https://reneshbedre.github.io/blog/mergevcf.html
-
C: RNAseq sample never as A in last base by
genomax ♦ 63k
If you do a google image search with `fastqc per base sequence content` you will see examples of ...
-
A: Searching for a sequence within another sequence Biopython by
jrj.healey ♦ 11k
Here's one approach. It's a little hacky, and going back to the original sequence to find the ind...
-
C: How to analyze RNAseq data with two/multiple treatment groups and each subject h by
wwu222 • 0
Hi Kevin, really appreciate your suggestion! I will try it out. Thank you very much!
-
C: Converting a VCF with SNPs and indels to BED format by
jeb247 • 10
Please try removing the leading "$" from: $ cut -f1-5 foo_snvs.bed | awk -v FS="\t" -v OFS=...
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