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71
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Job: PhD students in Data Science - DTU Biosustain
PhD Biology Data-Science
updated 1 hour ago by 39k • written 12 hours ago by ▴ 70
0
votes
0
replies
214
views
Job: Looking for a internship or master's course in Bioinformatics
masters internship career
updated 4 days ago by 39k • written 4 days ago by • 0
0
votes
0
replies
161
views
Job: Ensembl Production Project Leader
ensembl jobs
6 days ago by A@Ensembl ▴ 10
0
votes
0
replies
136
views
Job: DevelopMed MSCA COFUND Fellowship Programme in Precision Oncology
training postdoc jobs precision oncology
6 days ago by developmed • 0
0
votes
0
replies
241
views
Job: Senior Research Associate in Bioinformatics @ University of East Anglia, UK
translation Cancer
updated 11 days ago by 39k • written 11 days ago by ▴ 120
0
votes
0
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188
views
Job: Ph.D. Student in Computational Biology and Machine Learning at SciLifeLab, Stockholm
Proteomics Mass-spectrometry Machine-Learning Computational-Biology
13 days ago by lukas.kall ▴ 40
0
votes
0
replies
164
views
Job: PostDoc in Computational Biology at Leibniz Institute for Environmental Medicine
NGS Evolution Omics Aging
14 days ago by Arne.Sahm • 0
2
votes
1
reply
628
views
Job: MultiQC Python developer - Seqera Labs (remote)
Seqera Developer MultiQC Python
4 weeks ago by Phil Ewels ★ 1.2k
0
votes
0
replies
502
views
Job: Bioinformatics Research Scientist at CSU
github HPC R python
updated 20 days ago by 39k • written 5 weeks ago by • 0
0
votes
0
replies
475
views
Job: Looking for internship in boinformatics
plant-genetics
updated 20 days ago by 39k • written 6 weeks ago by • 0
0
votes
0
replies
376
views
Job: International Summer School on Epigenetics & Genome Stability in Health, Ageing & Disease in Mainz, Germany
Research Internship Summer-School Summer-Internship
updated 7 weeks ago by 39k • written 7 weeks ago by ▴ 40
0
votes
2
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549
views
Job: Bioinformatics Engineer at Stanford
bioinformatics-engineer stanford
updated 8 weeks ago by 39k • written 8 weeks ago by • 0
0
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0
replies
316
views
Job: Postdoctoral scholar in Computational Biology
Postdoc Genomics Computational-Biology
7 weeks ago by yuzun • 0
0
votes
0
replies
278
views
Job: Postdoc in Computational Biology, Regulatory Genomics & Deep Learning
NGS Vienna Transcription Machine-Learning
updated 8 weeks ago by 39k • written 8 weeks ago by • 0
0
votes
0
replies
477
views
Job: Computational Biologist / NGS Data Analyst
NGS Vienna Transcription
updated 8 weeks ago by 39k • written 8 weeks ago by • 0
0
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0
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338
views
Job: Senior Data Scientist - Hit Discovery at AstraZeneca (Cambridge, UK)
data-science cheminformatics drug-discovery
updated 8 weeks ago by 39k • written 8 weeks ago by ▴ 220
0
votes
0
replies
3.0k
views
Job: PhD project: Analysis Of Genomics And Epigenomics Data In Mice And Humans To Clarify The Identity Of Plasmacytoid Dendritic Cells And Their Physiolog…
multiomics immune-system dendritic-cells
updated 8 weeks ago by 39k • written 8 weeks ago by ▴ 30
0
votes
0
replies
488
views
Job: We are looking for a bioinformatician (m/f/d) who will join our Bioinformatics Core Facility at the Max Planck Freiburg
epigenetics sequencing max-planck omics freiburg
8 weeks ago by A.s. • 0
0
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0
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232
views
Job: Scientific Data Manager - postdoc position at ULiège, BE
Research-Storage Scientific-Data-Management
updated 8 weeks ago by 39k • written 8 weeks ago by • 0
0
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0
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257
views
Job: Job: Bioinformatics Engineer position at Stanford; part of NIH-funded GREGoR Consortium
bioinformatics-engineer
updated 8 weeks ago by 39k • written 8 weeks ago by • 0
0
votes
0
replies
346
views
Job: Bioinformatician - Cancer Research (Melbourne, Australia)
single-cell RNAseq
9 weeks ago by ahnje770 ▴ 20
1
vote
2
replies
494
views
Job: Seeking Jr. Bioinformatician Position
bioinformatician jobsearch
9 weeks ago by santos48 ▴ 40
0
votes
0
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234
views
Job: PhD opportunity in Computer Science / Systems Biology, university of Lille (France)
biology modeling systems job
9 weeks ago by cedric.lh • 0
0
votes
0
replies
402
views
Job: Bioinformatician IRCCS Regina Elena National Cancer Institute, Italy
unix-administration genomics
updated 10 weeks ago by 39k • written 10 weeks ago by • 0
0
votes
0
replies
496
views
Job: PhD candidate in Computational Biology, Munich, Germany
metagenomics microbiome computational-biology PhD
updated 10 weeks ago by 4.8k • written 10 weeks ago by ▴ 10
0
votes
0
replies
332
views
Job: Bioinformatics Officer - South Australian Genomics Centre (SAGC), Australia
genomics masters Australia postdoc
updated 11 weeks ago by 39k • written 11 weeks ago by ▴ 50
0
votes
0
replies
361
views
Job: Bioinformaticican/Computational Biologist - South Australian Genomics Centre (SAGC), Australia
genomics Australia postdoc
updated 11 weeks ago by 39k • written 11 weeks ago by ▴ 50
0
votes
0
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335
views
Job: Postdoctoral Fellow – Computational Biology (Genetic Interactions in Cancer)
networks cancer crispr postdoc
12 weeks ago by Colm • 0
0
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0
replies
366
views
Job: Postdoctoral position in comparative cancer genetics in dogs at NMBU, Norway
dogs cancer genome genomics
12 weeks ago by Michael 52k
0
votes
1
reply
488
views
Job: Full-Time Research Assistant Professor
Research Assistant-Professor
updated 3 months ago by 39k • written 3 months ago by • 0
0
votes
1
reply
579
views
Job: Senior Bioinformatics/Senior Data Science Analyst
bioinformatics-analyst
updated 3 months ago by 39k • written 3 months ago by • 0
0
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0
replies
362
views
Job: Bioinformatics Specialist/Data Science Specialist
NGS data-analysis
updated 3 months ago by 39k • written 3 months ago by • 0
0
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0
replies
421
views
Job: Bioinformatics Analyst/Data Science Analyst
bioinformatics-analyst
updated 3 months ago by 39k • written 3 months ago by • 0
0
votes
0
replies
437
views
Job: Principal Investigator-Professor: Machine learning-AI in human health
AI Machine-learning drug-discovery
updated 3 months ago by 39k • written 3 months ago by • 0
0
votes
0
replies
404
views
Job: PhD Position to Develop Machine Learning Methods for Microbiome Analysis
microbiome machine-learning
updated 3 months ago by 39k • written 3 months ago by • 0
0
votes
0
replies
310
views
Job: Post-doc in microRNA bioinformatics (up to 2 years): Prediction of single-cell miRNA-seq data in cancer
cancer microRNA R machine-learning
updated 12 weeks ago by 39k • written 3 months ago by ▴ 60
0
votes
0
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388
views
Job: Senior Biomedical Scientist - Job Vacancy
UKHSA
3 months ago by Janisha.chauhan • 0
1
vote
0
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450
views
Job: Bioinformatics Analyst I, Frederick National Laboratory for Cancer Research - Hybrid Remote/Onsite
bioinformatics-analyst
updated 12 weeks ago by 39k • written 3 months ago by ▴ 10
2
votes
3
replies
1.6k
views
Job: R Shiny Developer
HTML Javascript Shiny R
updated 3 months ago by • 0 • written 2.9 years ago by ▴ 20
1
vote
0
replies
385
views
Job: Computational Research Scientist I or II, Metabolic Network Modeling (Hybrid)
Toxicogenomics Metabolicnetworks Metabolomics
3 months ago by Diwan ▴ 650
0
votes
0
replies
364
views
Job: Principal Scientist, Applied Computational Research @ CITRE, Seville, Sapin
Principal-Scientist Applied-Computational-Research Drug-Discovery
updated 3 months ago by 39k • written 3 months ago by • 0
0
votes
0
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319
views
Job: Senior Scientist – Biomedical Knowledge Discovery and Data Mining @ CITRE (Seville, Spain)
Senior-Scientist
updated 3 months ago by 39k • written 3 months ago by • 0
0
votes
0
replies
276
views
Job: Senior Scientist, Applied Machine Learning @ CITRE (Seville, Spain)
Machine-Learning
updated 3 months ago by 39k • written 3 months ago by • 0
0
votes
0
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289
views
Job: 015274 UCD Post-doctoral Research Fellow Level 1 or Level 2, School of Biomolecular and Biomedical Science, Temporary 30 months post
Post-doctoral Fellow UCD Level or 2 1 Research
3 months ago by rachel.kelly1 • 0
0
votes
0
replies
577
views
Job: Computer scientist / Bioinformatician
data-science software-development structural-bioinformatics machine-learning
updated 3 months ago by 39k • written 3 months ago by ▴ 10
1
vote
0
replies
455
views
Job: Senior Bioinformatician - Human Genome Sequencing
statistical-genetics Bioinformatician postdoc
updated 3 months ago by 39k • written 4 months ago by ▴ 10
0
votes
0
replies
246
views
Job: Computational Postdoctoral Fellow - combinatorial CRISPR screening
CRISPR editing
updated 4 months ago by 72k • written 4 months ago by ▴ 10
0
votes
0
replies
405
views
Job: Ph.D. position: Identifying the origin of ancient humans and infectious diseases using ancient DNA
GPS SNPs paleogenomics infectious-diseases Ancient-DNA
4 months ago by eranelhaik ▴ 10
0
votes
0
replies
401
views
Job: Open Role - NGS Informatician @Sustainability Biotech Basecamp Research
Biotech NGS Genomics Biodiversity
updated 3 months ago by 39k • written 4 months ago by • 0
0
votes
0
replies
561
views
Job: Bioinformatician/Computational Biologist - South Australian Genomics Centre (SAGC), Australia
genomics Australia postdoc
4 months ago by Careers@SAHMRI ▴ 50
1,000 results • Page 1 of 20
Recent Votes
Comment: Salmon Index
Comment: Salmon Index
Resequencing data of pangenome
A: PolyPhen Humdiv vs HumVar discrepancies
A: How To Get Annotation For Bed File From Another Bed File
Answer: Salmon Index
Answer: mapped paired end reads extraction from .bam file
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Recent Replies
Comment: How to deal with duplicated gene IDs in TCGA RNA expression data? by Vincent Laufer ★ 2.8k
ok interesting. Do all, most, some, or a few of the genes have repeated lines. Is there a handy link to the exact file you are looking at?
Answer: Make a BedGraph file by bhumm ▴ 40
Bedtools window piped into genomecov? https://bedtools.readthedocs.io/en/latest/content/tools/window.html https://bedtools.readthedoc…
Answer: RNAseq Data and Pipeline by ATpoint 72k
STAR counts are the raw counts, that is appropriate for DESeq2.
Comment: RNAseq Data and Pipeline by swbarnes2 13k
STAR has a GeneCounts output that looks as you describe; three columns, depending on whether one thinks the prep is unstranded, or stranded…
Comment: RNAseq Data and Pipeline by Ram 39k
There is at least one more step that you haven't shared, isn't there? This line alone does not get you the data. You don't need to give us …
Comment: RNAseq Data and Pipeline by turcoa1 • 0
my entire code is not done. All I am trying to understand is if the STAR - counts downloaded from this query have raw reads. There are head…
Comment: RNAseq Data and Pipeline by Ram 39k
Please provide your entire code so those of us wishing to do a quick test can download and check for ourselves. Also, please use the format…
Comment: RNAseq Data and Pipeline by turcoa1 • 0
```r query <- GDCquery( project = "TCGA-THCA", data.category = "Transcriptome Profiling", data.type = "Gene Expression Quantificatio…
Comment: NCBI Common Taxonomy Tree by GenoMax 129k
It may be best to email NCBI help desk with these questions. Post their response here once you hear back from them.
Comment: RNAseq Data and Pipeline by Ram 39k
What data are you downloading? Can you show us your GDCquery commands please?
Comment: Salmon Index by ashleymb1116 • 0
I am working on cow, Bos Taurus. The Arabidopsis code was an example code that was on Salmon's github and an example for indexing they gave…
Comment: Salmon Index by GenoMax 129k
> I am using the Bos Taurus files Which organism are you actually working on? You have mentioned three so far, arabidopsis, human and now …
Comment: Salmon Index by ashleymb1116 • 0
Thank you, yes I am using the newer version of Ensembl. Above with Arabidopsis is the example Salmon gave, I am using the Bos Taurus files.…
Comment: Query qbout single cell sequencing by Ram 39k
Show us your exact cellranger and STARsolo commands, the full output to STARsolo as well as your thoughts on why it's not working for you.
Comment: How to deal with duplicated gene IDs in TCGA RNA expression data? by Ram 39k
Why is this an answer and not a comment?
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