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Job: Freelancer for setup informatic pipeline
PGSCatalog nexflow
updated 7 months ago by • 0 • written 7 months ago by • 0
0
votes
3
replies
862
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Job: Bioinformatics Analyst/Post-Doctoral Associate (UT MD Anderson Cancer Center)
Genomics Immuno-Oncology Cancer-Bioinformatics Single-Cell
written 8 months ago by ▴ 290
0
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0
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470
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Job: Bioinformatics Programmer, UCSF Health Clinical Cancer Genomics Lab and Genomic Medicine Lab
genome snp next-gen-sequencing
updated 4 months ago by 39k • written 7 months ago by ▴ 20
0
votes
0
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488
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Job: Bioinformatician in RNA biology of pediatric tumors
cancer-therapy RNA Alternative-Splicing
updated 6 months ago by 39k • written 7 months ago by ▴ 10
0
votes
0
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576
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Job: Senior Software Engineer
Software Engineer Senior
7 months ago by Princeton.university.careers • 0
2
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0
replies
561
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Job: Biodiversity Genomics NGS Informatician (London UK)
metagenomics biodiversity sequencing
updated 6 months ago by 39k • written 7 months ago by ▴ 20
0
votes
0
replies
387
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Job: Freelancer expert in advanced application in experiment design for NGS,
Single-cell MetaGenomics circRNA Freelancer
7 months ago by My • 0
0
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0
replies
369
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Job: Senior Bioinformatics Scientist - Database Management
Phenotypic RNA-seq GWAS
updated 5 months ago by 39k • written 7 months ago by ▴ 10
0
votes
0
replies
370
views
Job: Program Manager - Genomics
Genomics statistics omics
7 months ago by doscar ▴ 10
0
votes
0
replies
516
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Job: EMBL-EBI Postdoctoral Fellowship - Protein Science Machine Learning with AstraZeneca
proteins alphafold machine-learning
updated 5 months ago by 39k • written 7 months ago by ▴ 220
0
votes
0
replies
550
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Job: Post-Doctoral Associate in Computational Cancer Genomics and Cancer Evolution
job_postdoc_2022
7 months ago by ruping • 0
2
votes
0
replies
482
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Job: Bioinformaticians @ Human Technopole, Neurogenomics Centre (Milano, Italy)
single-cell transcriptomics neurogenomics
updated 5 months ago by 39k • written 7 months ago by ▴ 20
0
votes
0
replies
494
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Job: Research Assistant Professor - Whole-Genome Sequencing in Early Onset Alzheimer’s disease
TWAS WGS GWAS
updated 5 months ago by 39k • written 7 months ago by ▴ 10
0
votes
0
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450
views
Job: Research Assistant Professor - RNA Genomics in Neurodegenerative Diseases
Statistics RNA-seq
updated 5 months ago by 39k • written 7 months ago by ▴ 10
0
votes
0
replies
567
views
Job: Flatiron Research Fellow, Center for Computational Biology
biology life computational sciences
8 months ago by simonsF.careers • 0
0
votes
0
replies
393
views
Job: Senior Bioinformatician - MRC LMS - London UK
nextflow docker
updated 5 months ago by 39k • written 8 months ago by ★ 1.2k
0
votes
0
replies
542
views
Job: Proteomics Bioinformatician at AstraZeneca (Boston area)
AstraZeneca proteomics
updated 5 months ago by 39k • written 8 months ago by ▴ 220
0
votes
0
replies
367
views
Job: Postdoctoral in Computational Genomics (MGH/Harvard Medical School, Boston)
3D-genome Gene-regulation Transcription-factors Single-cell Neurogenesis
8 months ago by sudhir.thakurela • 0
1
vote
2
replies
622
views
Job: Senior Bioinformaticians - Cancer Research
genes calling variant RNA-Seq driver research cancer
8 months ago by David ▴ 10
0
votes
0
replies
397
views
Job: Research Technician – Computational Biology Core - (UConn CBC) - Connecticut
connecticut technician
updated 5 months ago by 39k • written 8 months ago by ▴ 880
0
votes
0
replies
353
views
Job: Bioinformatician - Completing the Plant Tree of Life Project @Royal Botanic Gardens, Kew
evolution python phylogenomics plants
updated 5 months ago by 39k • written 8 months ago by • 0
0
votes
0
replies
623
views
Job: Bioinformatics Software Engineer (Remote) - R/RShiny/Bioconductor
R transcriptomics bioconductor
8 months ago by yuhan.mao • 0
0
votes
0
replies
573
views
Job: Biomedical research
learning python postdoc Neuroscience Master machine
8 months ago by sivan.kinreich • 0
0
votes
0
replies
452
views
Job: Postdoctoral Research Fellow position in neurodevelopmental genetics research
genetics genome database
updated 5 months ago by 39k • written 8 months ago by • 0
2
votes
0
replies
444
views
Job: Bioinformatics Officer - South Australian Genomics Centre (SAGC), Australia
genomics postdoc
updated 5 months ago by 39k • written 8 months ago by ▴ 50
7
votes
6
replies
1.1k
views
Job: Come work with me! Bioinformatician - Boston MA
job
updated 2 days ago by • 0 • written 8 months ago by 103k
1
vote
0
replies
455
views
Job: Post Doctoral Fellow (Bioinformatics) @ Genome Institute of Singapore
python population-genomics cloud-computing singapore precision-medicine
8 months ago by Rodrigo ▴ 10
0
votes
0
replies
539
views
Job: Bioinformatics Specialist @ Genome Institute of Singapore
python population-genomics cloud-computing singapore precision-medicine
8 months ago by Rodrigo ▴ 10
0
votes
1
reply
806
views
Job: Data Architect / Data Engineer – world-class science center at DTU Biosustain
PostgreSQL computer SQL science Python
written 17 months ago by ▴ 70
0
votes
0
replies
561
views
Job: Hector Research Career Development Award For W1 Assistant Professors (with or without Tenure Track) & Junior Research Group Leaders
Karlsruhe Germany HFA Award
9 months ago by info ▴ 30
0
votes
0
replies
557
views
Job: Bioinformatician III
III Bioinformatician
9 months ago by UMASS.Med.Careers • 0
0
votes
0
replies
477
views
Job: Senior Bioinformatician at Wellcome Sanger Institute
UK Sanger job
9 months ago by predeus ★ 1.9k
0
votes
0
replies
508
views
Job: Master’s student or a Postdoc in neuroscience and machine learning, New York
learning python postdoc Neuroscience degree Master machine
9 months ago by sivan.kinreich • 0
0
votes
0
replies
614
views
Job: Multiple data scientist positions in computational biomedicine
learning science biomedicine data machine
9 months ago by pandey.gaurav ▴ 190
0
votes
0
replies
340
views
Job: Postdoctoral research scholar position in bioinformatics/data science at the University of Iowa
postdoctoral data-science
updated 5 months ago by 39k • written 9 months ago by • 0
0
votes
0
replies
533
views
Job: Postdoctoral fellow in Spatial Genomics
spatial omics imaging computational oncology
9 months ago by Ruben • 0
0
votes
0
replies
2.3k
views
Job: Research Fellow - Bioinformatics / Molecular Epidemiology - Child Health and Development - Singapore Institute for Clinical Sciences
job
9 months ago by Jon • 0
0
votes
0
replies
383
views
Job: Postdoctoral Fellowship in Statistical Genomics & Genetics at UT Southwestern Medical Center Dallas TX US
statistics genetics
updated 5 months ago by 39k • written 9 months ago by ▴ 20
0
votes
0
replies
496
views
Job: Computational Biologist at UT Southwestern Medical Center Dallas TX US
scRNA-seq sequencing
updated 5 months ago by 39k • written 9 months ago by ▴ 20
0
votes
0
replies
290
views
Job: Research Program Manager II
Research-Program-Manager BIB
updated 10 weeks ago by 39k • written 9 months ago by • 0
0
votes
0
replies
504
views
Job: Bioinformatician II
II Bioinformatician
9 months ago by UMASS.Med.Careers • 0
0
votes
0
replies
308
views
Job: Postdoc in neuroscience and machine learning
learning python Neuroscience machine
9 months ago by sivan.kinreich • 0
0
votes
0
replies
445
views
Job: Bioinformatician III, University of Massachusetts Chan Medical School
III Bioinformatician
updated 9 months ago by 52k • written 9 months ago by • 0
0
votes
0
replies
380
views
Job: Postdoc in Bioinformatics and Computational Genomics (2 positions) - Dong Lab
genomics programming bash R computational
9 months ago by sschwaninger • 0
1
vote
2
replies
653
views
Job: Bioinformaticist - Oncology - Bone Marrow Transplant & Leukemia
Oncology Bioinformaticist Transplant Bone Leukemia
9 months ago by shalielenbaas • 0
1
vote
0
replies
455
views
Job: Software Developer: Geneva: Rhea +UniProt/Swiss-Prot
Rhea UniProt ChEBI Chemistry
9 months ago by me ▴ 750
1
vote
1
reply
523
views
Job: Senior Director, Bioinformatics - PDx (Post-Diagnostic Applications)
senior-director
updated 5 months ago by 39k • written 9 months ago by ▴ 10
0
votes
0
replies
317
views
Job: Group Leader - Theory@EMBL and Developmental Biology Unit
Biology plasticity Theory developmental biology
9 months ago by EMBL Recruitment ▴ 30
0
votes
0
replies
527
views
Job: REANNOUNCEMENT - Postdoc Position in Immunoinformatics, Machine Learning and Proteomics, University of Southern Denmark
Proteomics Machine Immunoinformatics Learning
9 months ago by info ▴ 70
0
votes
0
replies
309
views
Job: Group Leader – Structural or Molecular Systems Biology
biological systems computational structural biology
9 months ago by EMBL Recruitment ▴ 30
1,000 results • Page 3 of 20
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Calculating read abundances across MAGs (question)
Comment: Contigs to chromosomes annotation
Comment: Contigs to chromosomes annotation
Comment: Same GEO Accession, different SRR number, how to download this RNA-seq paired-en
Comment: Same GEO Accession, different SRR number, how to download this RNA-seq paired-en
Answer: how to choose an efficient filtering threshold to remove shorter and low quality
Contigs to chromosomes annotation
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Recent Replies
Comment: Contigs to chromosomes annotation by GenoMax 129k
I would still recommend using `minimap2` and aligning against reference. It should go pretty fast. You can either work with PAF (default) f…
Comment: Diff Bind Questions by Ram 39k
I've moved this to a comment as it does not directly answer OP's question.
Comment: Diff Bind Questions by Daniel ▴ 30
I'm very new myself and there's plenty of people who can answer your question better than I can, but here is a resource I found extremely h…
Comment: Contigs to chromosomes annotation by alexandru.bologa.marian ▴ 50
If the number of contigs was so small I would manually check each alignment and edit the header of each contig,inserting the corresponding …
Comment: Gviz Coverage Plots by Ram 39k
Do not post on multiple fora just because you want a fast response, it's plain rude. At least point to the other post so we know you're ask…
Comment: Limma returned only positive logFC values by melissachua90 ▴ 40
No the library sizes across conditions should be relatively homogenous because it's from the same dataset. I clustered the samples into sub…
Comment: Limma returned only positive logFC values by LChart 2.6k
It shouldn't, unless there's a misspecification in design. Is it the case that the library sizes are very different between the conditions …
Comment: Contigs to chromosomes annotation by Darked89 4.3k
For a pure contig to Dmel chromosome BLAST should be OK. I am fan of LAST because it is fairly easy to convert MAF to SAM/BAM and then vi…
Comment: Contigs to chromosomes annotation by GenoMax 129k
How many contigs do you have? If the contigs are ~2x number of Drosophila chromosomes (meaning you have long/large contigs) then using a lo…
Comment: Contigs to chromosomes annotation by alexandru.bologa.marian ▴ 50
Thank you for your answer! It would be wrong just to BLAST all the contigs from the draft assembly against each reference chromosome of D.…
Comment: Limma returned only positive logFC values by melissachua90 ▴ 40
Several hundred to 10000 DEGs. Would normalization affect logFC?
Answer: Contigs to chromosomes annotation by Darked89 4.3k
Not sure if it is the easiest, but you can map your new assembly to i.e. Dmel genome using LAST: * www: https://gitlab.com/mcfrith/last …
Answer: Gene prediction software by Darked89 4.3k
How complete/polished is your catfish genome assembly? Also: do you have some good quality RNA-Seq? With a draft genome it would be…
Comment: Limma returned only positive logFC values by LChart 2.6k
It'd be helpful to know how many differentially expressed genes there are. If you've got a handful and they're all upregulated, I wouldn't …
Comment: variant allelic fraction by Ram 39k
Cross-posted on bioinfo SE: https://bioinformatics.stackexchange.com/questions/21118/how-to-calculate-the-variant-allelic-fraction-vaf OP,…
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