Showing: kallistoreset
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104
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23k
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62 follow
1
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57
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1
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17k
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35 follow
1
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48
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2
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5.1k
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30 follow
2
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11
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1
answer
4.3k
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1
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following Kallisto with DESeq2 using tximport package
tximport ensembl deseq2 kallisto ucsc written 3.5 years ago by Assa Yeroslaviz1.2k • updated 3.4 years ago by Michael Love1.9k
10
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0
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2.1k
views
7 follow
0
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4
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2
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3.1k
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2
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differential gene expression using sleuth
sleuth kallisto rna-seq written 3.3 years ago by frida.danielsson40 • updated 3.2 years ago by cpcantalapiedra140
11
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4
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3.4k
views
9 follow
4
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Sleuth: Combined lrt and wt tests, clustered heatmap
R sleuth kallisto rna-seq heatmap written 2.6 years ago by bioinfo8120 • updated 20 months ago by erdiazval40
1
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0
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2.2k
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0
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6
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2
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3.2k
views
9 follow
2
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kallisto: strand-specific and fragment length calculation
kallisto rna-seq written 2.2 years ago by user230613280 • updated 2.2 years ago by pmelsted90
4
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1
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1.1k
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1
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4
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0
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1.4k
views
5 follow
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Paired and Multivariate sleuth
R sleuth kallisto rna-seq written 23 months ago by Tim D50 • updated 14 months ago by samantha_jeschonek50
3
votes
1
answer
940
views
1
answer
Are TPM values generated by different programs comparable?
stringtie tpm kallisto written 22 months ago by amy.bashir80 • updated 22 months ago by h.mon26k
8
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1
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958
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7 follow
1
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Kallisto will not produce .bam files
kallisto rna-seq written 14 months ago by Kristin Muench420 • updated 14 months ago by Kevin Blighe45k
1
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0
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1.1k
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0
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Kallisto TPM values
tpm kallisto written 13 months ago by oliveira.bhn10
3
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1
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99
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5 follow
1
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3
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0
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2.2k
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0
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3
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3
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0
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1.6k
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0
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2
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955
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0
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2.0k
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0
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3
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2
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1.7k
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2
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ENSEMBL Transcript_Accession ID conversion
ensembl sleuth kallisto rna-seq written 3.3 years ago by dinindu.senanayake0 • updated 2.1 years ago by WouterDeCoster40k
1
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1
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3.1k
views
1
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Using 'tximport' library for downstream DGE after quantifying with Kallisto
tximport R kallisto rna-seq written 3.2 years ago by Sinji2.8k • updated 3.2 years ago by Michael Love1.9k
2
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2
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1.0k
views
2
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1
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1
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900
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1
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2
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1.5k
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0
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1
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0
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1.5k
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0
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18
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1
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2.4k
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1
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Is Sleuth a good package?
R sleuth kallisto rna-seq written 2.8 years ago by SmallChess480
1
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1
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1.3k
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1
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0
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0
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669
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kallisto to metaseqR
R next-gen kallisto rna-seq written 2.6 years ago by bioinfo8120
0
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1
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1.3k
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1
answer
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