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<prev • 270 results • page 1 of 9 • next >
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Discrepancy in gene set size between gage() and geneData()
pathview gage kegg pathway analysis written 2.6 years ago by serpalma.v • 10 • updated 20 hours ago by RamRS ♦ 17k
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1
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48
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1
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Map Gene names/IDs on Pathway with KEGG
pathway gene kegg written 2 days ago by Shelle • 0 • updated 2 days ago by h.mon ♦ 19k
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2
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8.4k
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5 follow
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How To Use The Kegg Xml Files?
pathway kegg written 8.2 years ago by Panos • 1.6k • updated 12 days ago by RamRS ♦ 17k
35
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10
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20k
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18 follow
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Get All The Genes In A Pathway (E.G. Kegg)
pathway gwas kegg gene written 7.2 years ago by Stephen ♦ 2.6k • updated 17 days ago by RamRS ♦ 17k
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118
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Crosstalk between KEGG pathways
gene genome sequence kegg written 24 days ago by anu014 • 150
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1
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147
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1
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Directionality of KEGG/Reactome/Wikipathways
pathways wikipathways reactome kegg written 4 weeks ago by g.e.novakovsky • 20 • updated 4 weeks ago by h.mon ♦ 19k
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119
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Finding Kegg IDs for Phytozome gene IDs
gene chlamydomonas phytozome kegg written 5 weeks ago by fiorec • 0
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1
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100
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1
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syntax questions about getting sequences from KO numbers using KEGGREST
kegg written 6 weeks ago by jon.sy.tarn • 10 • updated 5 weeks ago by Marks • 40
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126
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Kegg Relational Database Access
gene database kegg written 6 weeks ago by dllopezr • 20
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1
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2.4k
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1
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Tool: clusterProfiler: an R package for comparing biological themes among gene clusters
tool kegg clusterprofiler R gsea go written 2.2 years ago by Guangchuang Yu • 1.9k
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3
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3.8k
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3
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pathway analysis tools and KEGG gene sets from MSigDB
msigdb pathway analysis kegg written 3.4 years ago by Zhilong Jia • 1.4k • updated 7 weeks ago by Biostar ♦♦ 20
5
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2
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143
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7 follow
2
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Is there any quick way to annotate KO terms using a script or tool?
ko annotation kegg written 9 weeks ago by arsilan324 • 60 • updated 9 weeks ago by Pierre Lindenbaum ♦ 112k
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112
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KEGG Orthology linkage Pathways
genome metagenome kegg written 10 weeks ago by vincentdunon • 0
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5
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4.4k
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5
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How to perform KEGG enrichment analyses on a set of genes
pathway enrichment kegg rna-seq R written 22 months ago by miyakokodama • 10 • updated 11 weeks ago by bigmawen • 270
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142
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KEGG pathway file for running genome music path-scan
music kegg written 3 months ago by Chirag Nepal • 2.1k
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0
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225
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0
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StringDB get enrichment KEGG
enrichment kegg R written 5 months ago by Pin.Bioinf • 150 • updated 3 months ago by Biostar ♦♦ 20
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1
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2.5k
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1
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Map gene list to pathway and visualize it
kegg written 2.8 years ago by bharata1803 • 290 • updated 3 months ago by liux.bio • 280
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173
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0
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download KEGG genes sequence in fasta format
genome gene sequence kegg written 3 months ago by doctor.dee005 • 130
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3
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3.2k
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3
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How to perform KEGG pathway analysis in R?
kegg written 12 months ago by MAPK • 1.3k • updated 4 months ago by 328558608 • 60
2
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0
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163
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Download all KEGG genomes
genome kegg bash written 4 months ago by Melinda • 0
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1
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266
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1
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Genome annotation to KEGG KO ids
genome assembly sequence kegg pathway written 4 months ago by doctor.dee005 • 130 • updated 4 months ago by lieven.sterck • 2.3k
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217
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0
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How to get pathway ID (map ID) by pathway name
kegg written 5 months ago by halehashki • 0 • updated 4 months ago by Biostar ♦♦ 20
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0
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176
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0
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Get sequences for KEGG by EC and taxa
ec number kegg gene sequences written 5 months ago by dllopezr • 20 • updated 5 months ago by natasha.sernova • 3.0k
0
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2
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336
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2
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KEGG mapping from de novo transcriptome annotation
rnaseq annotation kegg kobas written 5 months ago by pablo61991 • 40
2
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0
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373
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0
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[OP Inactive] clusterProfiler (enrichKEGG) error
guangchuang yu kegg clusterprofiler written 5 months ago by bikash2510 • 30 • updated 5 months ago by RamRS ♦ 17k
0
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1
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218
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1
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Annotation Term Overrepresentation/Enrichment Analysis
annotation kegg go written 5 months ago by Benni • 20 • updated 5 months ago by n85825 • 0
3
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3
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395
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3
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Converting Reactome SMBL/Biopax to KGML format (mainly for EnrichmentBrowser)
kgml biopax kegg enrichmentbrowser smbl written 6 months ago by v36nguyen • 10
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447
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Same KEGG pathways enriched by up- and down-regulated genes
pathway enrichment analysis kegg rna-seq written 6 months ago by mahmeh • 0
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348
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Most genes with entrez id in KEGG database don't have a pathway assigned. Is there a tool already available that uses textmining to assign pathway to genes.
keggrest reactome kegg written 6 months ago by Saad Khan • 310
3
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1
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320
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1
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Gage duplicate identifiers as row names
gage bacteria kegg rna-seq entrezid written 7 months ago by bsp017 • 20 • updated 7 months ago by h.mon ♦ 19k
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