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<prev • 272 results • page 1 of 10 • next >
5
votes
2
answers
177
views
2
answers
Unable to map genes to KEGG pathway using pathview
R bioconductor oryza sativa kegg clusterprofiler written 24 days ago by rice.researcher • 110 • updated 17 days ago by bigmawen • 300
3
votes
2
answers
1.9k
views
2
answers
Convert Ncbi Species Names To Kegg Species Names
ncbi format mapping kegg written 7.1 years ago by User 2385 • 0 • updated 17 days ago by michau • 10
0
votes
0
answers
99
views
0
answers
Converting KEGG pathways to SBML with preserving compound and reaction identifiers
kgml keggtranslator stoichiometry matrix kegg sbml written 26 days ago by Na Sed • 260
0
votes
2
answers
1.3k
views
2
answers
SPIA - How to update and integrate new KEGG pathways????
spia kegg written 3.1 years ago by yourA • 20 • updated 6 weeks ago by Mike • 0
0
votes
0
answers
871
views
0
answers
Discrepancy in gene set size between gage() and geneData()
pathview gage kegg pathway analysis written 2.7 years ago by serpalma.v • 20 • updated 7 weeks ago by RamRS ♦ 19k
0
votes
1
answer
118
views
1
answer
Map Gene names/IDs on Pathway with KEGG
pathway gene kegg written 7 weeks ago by Shelle • 0 • updated 7 weeks ago by h.mon ♦ 21k
20
votes
2
answers
8.6k
views
7 follow
2
answers
How To Use The Kegg Xml Files?
pathway kegg written 8.4 years ago by Panos • 1.6k • updated 9 weeks ago by RamRS ♦ 19k
35
votes
10
answers
20k
views
18 follow
10
answers
Get All The Genes In A Pathway (E.G. Kegg)
pathway gwas kegg gene written 7.4 years ago by Stephen ♦ 2.6k • updated 9 weeks ago by RamRS ♦ 19k
0
votes
0
answers
160
views
0
answers
Crosstalk between KEGG pathways
gene genome sequence kegg written 10 weeks ago by anu014 • 150
1
vote
1
answer
211
views
1
answer
Directionality of KEGG/Reactome/Wikipathways
pathways wikipathways reactome kegg written 11 weeks ago by g.e.novakovsky • 20 • updated 11 weeks ago by h.mon ♦ 21k
0
votes
0
answers
165
views
0
answers
Finding Kegg IDs for Phytozome gene IDs
gene chlamydomonas phytozome kegg written 12 weeks ago by fiorec • 0
1
vote
1
answer
131
views
1
answer
syntax questions about getting sequences from KO numbers using KEGGREST
kegg written 3 months ago by jon.sy.tarn • 10 • updated 3 months ago by Marks • 40
2
votes
0
answers
169
views
0
answers
Kegg Relational Database Access
gene database kegg written 3 months ago by dllopezr • 40
13
votes
1
answer
2.6k
views
1
answer
Tool: clusterProfiler: an R package for comparing biological themes among gene clusters
tool kegg clusterprofiler R gsea go written 2.3 years ago by Guangchuang Yu • 2.0k
11
votes
3
answers
4.0k
views
3
answers
pathway analysis tools and KEGG gene sets from MSigDB
msigdb pathway analysis kegg written 3.5 years ago by Zhilong Jia • 1.4k • updated 3 months ago by Biostar ♦♦ 20
5
votes
2
answers
208
views
7 follow
2
answers
Is there any quick way to annotate KO terms using a script or tool?
ko annotation kegg written 3 months ago by arsilan324 • 60 • updated 3 months ago by Pierre Lindenbaum ♦ 114k
0
votes
0
answers
181
views
0
answers
KEGG Orthology linkage Pathways
genome metagenome kegg written 4 months ago by vincentdunon • 0
2
votes
5
answers
5.0k
views
5
answers
How to perform KEGG enrichment analyses on a set of genes
pathway enrichment kegg rna-seq R written 2.0 years ago by miyakokodama • 10 • updated 4 months ago by bigmawen • 300
1
vote
0
answers
204
views
0
answers
KEGG pathway file for running genome music path-scan
music kegg written 4 months ago by Chirag Nepal • 2.1k
0
votes
0
answers
306
views
0
answers
StringDB get enrichment KEGG
enrichment kegg R written 7 months ago by Pin.Bioinf • 170 • updated 5 months ago by Biostar ♦♦ 20
5
votes
1
answer
2.6k
views
1
answer
Map gene list to pathway and visualize it
kegg written 2.9 years ago by bharata1803 • 310 • updated 5 months ago by liux.bio • 280
0
votes
0
answers
216
views
0
answers
download KEGG genes sequence in fasta format
genome gene sequence kegg written 5 months ago by Dattatray Mongad • 200
7
votes
3
answers
4.0k
views
3
answers
How to perform KEGG pathway analysis in R?
kegg written 13 months ago by MAPK • 1.3k • updated 5 months ago by 328558608 • 60
2
votes
0
answers
231
views
0
answers
Download all KEGG genomes
genome kegg bash written 6 months ago by Melinda • 0
0
votes
1
answer
370
views
1
answer
Genome annotation to KEGG KO ids
genome assembly sequence kegg pathway written 6 months ago by Dattatray Mongad • 200 • updated 6 months ago by lieven.sterck • 3.0k
0
votes
0
answers
266
views
0
answers
How to get pathway ID (map ID) by pathway name
kegg written 6 months ago by halehashki • 0 • updated 6 months ago by Biostar ♦♦ 20
0
votes
0
answers
230
views
0
answers
Get sequences for KEGG by EC and taxa
ec number kegg gene sequences written 6 months ago by dllopezr • 40 • updated 6 months ago by natasha.sernova • 3.1k
0
votes
2
answers
402
views
2
answers
KEGG mapping from de novo transcriptome annotation
rnaseq annotation kegg kobas written 7 months ago by pablo61991 • 40
2
votes
0
answers
417
views
0
answers
[OP Inactive] clusterProfiler (enrichKEGG) error
guangchuang yu kegg clusterprofiler written 7 months ago by bikash2510 • 30 • updated 7 months ago by RamRS ♦ 19k
0
votes
1
answer
282
views
1
answer
Annotation Term Overrepresentation/Enrichment Analysis
annotation kegg go written 7 months ago by Benni • 20 • updated 7 months ago by n85825 • 0
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