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<prev • 267 results • page 1 of 9 • next >
5
votes
2
answers
56
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6 follow
2
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Is there any quick way to annotate KO terms using a script or tool?
ko annotation kegg written 8 hours ago by arsilan324 • 60 • updated 8 hours ago by Pierre Lindenbaum ♦ 110k
4
votes
1
answer
193
views
1
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retrieving pathways belong to my gene names
python kegg bioservices written 6 weeks ago by EFN • 0 • updated 21 hours ago by EagleEye • 5.5k
0
votes
0
answers
43
views
0
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KEGG Orthology linkage Pathways
genome metagenome kegg written 6 days ago by vincentdunon • 0
2
votes
5
answers
3.7k
views
5
answers
How to perform KEGG enrichment analyses on a set of genes
pathway enrichment kegg rna-seq R written 20 months ago by miyakokodama • 10 • updated 13 days ago by bigmawen • 270
0
votes
0
answers
80
views
0
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KEGG pathway file for running genome music path-scan
music kegg written 27 days ago by Chirag Nepal • 2.1k
3
votes
0
answers
174
views
0
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check if my gene name exists in Kegg pathway
python kegg bioservices written 4 weeks ago by EFN • 0 • updated 4 weeks ago by Vijay Lakhujani ♦ 2.7k
0
votes
0
answers
151
views
0
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StringDB get enrichment KEGG
enrichment kegg R written 3 months ago by Pin.Bioinf • 70 • updated 5 weeks ago by Biostar ♦♦ 20
5
votes
1
answer
2.2k
views
1
answer
Map gene list to pathway and visualize it
kegg written 2.6 years ago by bharata1803 • 280 • updated 6 weeks ago by liux.bio • 250
0
votes
0
answers
112
views
0
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download KEGG genes sequence in fasta format
genome gene sequence kegg written 6 weeks ago by doctor.dee005 • 60
12
votes
1
answer
2.2k
views
1
answer
Tool: clusterProfiler: an R package for comparing biological themes among gene clusters
tool kegg clusterprofiler R gsea go written 2.0 years ago by Guangchuang Yu • 1.9k • updated 6 weeks ago by pshubhamoy • 20
7
votes
3
answers
2.3k
views
3
answers
How to perform KEGG pathway analysis in R?
kegg written 9 months ago by MAPK • 1.2k • updated 7 weeks ago by 328558608 • 60
2
votes
0
answers
118
views
0
answers
Download all KEGG genomes
genome kegg bash written 9 weeks ago by Melinda • 0
0
votes
1
answer
129
views
1
answer
Genome annotation to KEGG KO ids
genome assembly sequence kegg pathway written 9 weeks ago by doctor.dee005 • 60 • updated 9 weeks ago by lieven.sterck • 1.9k
0
votes
0
answers
155
views
0
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How to get pathway ID (map ID) by pathway name
kegg written 12 weeks ago by halehashki • 0 • updated 10 weeks ago by Biostar ♦♦ 20
0
votes
0
answers
129
views
0
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Get sequences for KEGG by EC and taxa
ec number kegg gene sequences written 12 weeks ago by dllopezr • 10 • updated 12 weeks ago by natasha.sernova • 3.0k
0
votes
2
answers
248
views
2
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KEGG mapping from de novo transcriptome annotation
rnaseq annotation kegg kobas written 3 months ago by pablo61991 • 40
2
votes
0
answers
288
views
0
answers
[OP Inactive] clusterProfiler (enrichKEGG) error
guangchuang yu kegg clusterprofiler written 3 months ago by bikash2510 • 30 • updated 3 months ago by Ram ♦ 15k
0
votes
1
answer
151
views
1
answer
Annotation Term Overrepresentation/Enrichment Analysis
annotation kegg go written 3 months ago by Benni • 20 • updated 3 months ago by n85825 • 0
3
votes
3
answers
249
views
3
answers
Converting Reactome SMBL/Biopax to KGML format (mainly for EnrichmentBrowser)
kgml biopax kegg enrichmentbrowser smbl written 4 months ago by v36nguyen • 10
0
votes
0
answers
320
views
0
answers
Same KEGG pathways enriched by up- and down-regulated genes
pathway enrichment analysis kegg rna-seq written 4 months ago by mahmeh • 0
0
votes
0
answers
266
views
0
answers
Most genes with entrez id in KEGG database don't have a pathway assigned. Is there a tool already available that uses textmining to assign pathway to genes.
keggrest reactome kegg written 4 months ago by Saad Khan • 310
3
votes
1
answer
275
views
1
answer
Gage duplicate identifiers as row names
gage bacteria kegg rna-seq entrezid written 5 months ago by bsp017 • 20 • updated 5 months ago by h.mon ♦ 16k
1
vote
1
answer
211
views
1
answer
KEGG Pathway - A circle includes many compounds
kegg written 5 months ago by zrongstudent • 0 • updated 5 months ago by Wolf Ihlenfeldt • 40
0
votes
0
answers
240
views
0
answers
Extracting FASTA file from a list of KO numbers on the KeGG database
gene fasta kegg R written 5 months ago by joel.white332 • 0
2
votes
1
answer
274
views
1
answer
how trustable are KEGG pathways?
pathways kegg written 6 months ago by igor ♦ 6.3k • updated 6 months ago by Mo • 840
4
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0
answers
1.3k
views
8 follow
0
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News: GeneSCF (Gene Enrichment Tool): Advice to users
genescf news kegg go annotation written 18 months ago by EagleEye • 5.5k
1
vote
3
answers
1.3k
views
3
answers
Mapping multiple expression data on KEGG genes and metabolites
kegg written 3.3 years ago by The • 90 • updated 6 months ago by raghavsehgal1995 • 0
0
votes
1
answer
242
views
1
answer
Trouble getting KEGG Ortholog Table from K numbers on KEGG webpage
annotation orthology kegg written 6 months ago by MGlenn • 0
1
vote
1
answer
931
views
1
answer
KEGG pathway per genes relation
kegg written 2.6 years ago by bharata1803 • 280 • updated 6 months ago by Biostar ♦♦ 20
1
vote
1
answer
385
views
1
answer
KEGG pathways and modules
annotation kegg gsea kegg modules written 7 months ago by amborella • 0 • updated 7 months ago by EagleEye • 5.5k
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