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348

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kissplice SNP output and kissDE runtime

R kissde rna-seq snp kissplice written 4 months ago by erica • 10 • updated 4 months ago by clara.benoitp • 10

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419

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kissDE error during 'diffExpressedVariants' step: "Error in data.frame..."

R kissde snp kissplice written 9 months ago by TrentGenomics • 30

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381

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problem in installing kissDE

snp kissde written 9 months ago by majeedaasim • 20 • updated 9 months ago by Ram ♦ 17k

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473

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kissDE: How do I use diffExpressedVariants with some zero counts in my data?

R diffexpressedvariants rna-seq kissde written 15 months ago by Zoe • 0

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963

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Error in running "diffExpressedVariants" function in kissDE R package

kissplice snp kissde written 23 months ago by c.evang • 10 • updated 20 months ago by vincent.lacroix • 80

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668

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Error running KissDE

kissde kissplice written 23 months ago by c.evang • 10

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Recent Replies

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Hi phosphodiester_bond, sounds promising. Good to see that ATAC-seq tools are continuously bein...
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Sure. If you could post vep annotation data format, example data and output required, biostars wo...
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As you start your research, you should spend quiet some quality time on reading the literature ar...
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That looks like an "internal" error of that script, and I expect the developers to understand bes...
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Yup, exactly.
A: Processing ATAC-seq data after peak calling by phosphodiester_bond • 0
Hi Anaïs, If you'd like to analyze differences in transcription factor activity between the two ...
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Homer takes alignment files to create tag directory. you can normalize the depth of your BAM file...
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The error message explicitly told you what to do: > best to only uobject letters and numbers ...
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After DESeq2 uses the function `make.names()` on **sampleTable$condition**, `CD39+` is changed to...
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Does anyone think that the manual of PLINK is not easy to understand?
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I thought I should avoid to use plink2 since they said it was in beta testing on the old home pag...
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Thanks Devon! That makes sense.

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