Showing: kmerreset
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jellyfish kmer counting discrepancy
genome count kmer rna-seq jellyfish written 5 weeks ago by 7ehuang0 • updated 5 weeks ago by Istvan Albert ♦♦ 81k
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Sequence read (id) specific kmer frequency calculation
reads kmer sequence metagenome written 3.9 years ago by arif.at.iut0 • updated 8 weeks ago by Biostar ♦♦ 20
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Different metrics with same kmer values in SPAdes assembly
assembly spades kmer written 5 months ago by gustavo.teixeira0 • updated 5 months ago by ATpoint24k
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Extracting related sequences from a FASTA file
sequence comparizon data mining kmer written 10 months ago by DataFanatic140 • updated 8 months ago by Biostar ♦♦ 20
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Blog: Fast kmer reverse complement code using bit tricks
kmer reverse-complement gatb code blog written 5.1 years ago by Rayan Chikhi1.4k • updated 9 months ago by martinsteinegger30
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Finding 16 mer not present in GRCh38
genome kmer written 10 months ago by Srw30 • updated 9 months ago by Kevin Blighe50k
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k mer analysis
k-mer assembly analysis kmer written 10 months ago by Mostafa10
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Abyss (Optimizing the parameter k)
assembly kmer abyss written 12 months ago by Mbillah110 • updated 10 months ago by Biostar ♦♦ 20
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Bulk primer design
fasta bulk primers kmer written 10 months ago by DataFanatic140 • updated 10 months ago by Pierre Lindenbaum123k
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error while creating kover dataset from fastq
kmer kover written 12 months ago by ekaterina.avershina0 • updated 12 months ago by Alexandre Drouin50
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Increase the kmer size in IDBA_UD?
illumina ngs idba_ud idba kmer written 17 months ago by mail2steff50 • updated 17 months ago by Sej Modha4.5k
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7 follow
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Judging best assembly
assembly cut off kmer coverage velvet written 18 months ago by deepti1rao20 • updated 18 months ago by Rohit1.4k
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Estimating genome size from k-mer histograms...
kmer next-gen genome size written 5.3 years ago by ab.tsubaki50 • updated 18 months ago by h.mon27k
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kmer distribution curve shifts to right of poisson distribution
kmer poisson distribution written 19 months ago by deepti1rao20 • updated 19 months ago by h.mon27k
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kmer distribution tiny peak at low coverage
assembly kmer distribution written 19 months ago by deepti1rao20 • updated 19 months ago by h.mon27k
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kmergenie input forward and reverse reads
kmergenie paired end kmer written 21 months ago by deepti1rao20 • updated 20 months ago by Biostar ♦♦ 20
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fastqc file showing bad result for tile kmer
wgs tile kmer fail fastqc written 21 months ago by analytical0 • updated 21 months ago by YaGalbi1.4k
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hg19 features -> mm10
mm10 watson.strand tsswindows kmer written 23 months ago by andreiareis198730 • updated 23 months ago by Jean-Karim Heriche21k
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Recommendation on k-mer counting package for multiple libraries?
kmer written 24 months ago by johnnytam100100 • updated 24 months ago by 5heikki8.6k
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