Showing: kmerreset
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TPM VS FPKM VS TMM and K-mer specific expression quantification
kmer rna-seq written 3 months ago by user230613240 • updated 7 weeks ago by Rob2.1k
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Does Jellyfish support zipped fastq sequences?
genome assembly kmer written 9 weeks ago by comma19930 • updated 9 weeks ago by genomax33k
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FastQC kmer content output
kmer rna-seq fastqc written 11 weeks ago by Maria0 • updated 11 weeks ago by Istvan Albert ♦♦ 73k
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Representing a sequence as k-mer composition
sequence kmer dna written 4 months ago by mdurrant10 • updated 3 months ago by marsvetlana10
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5 follow
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Can anybody explain what this statement says?
kmer counter kmer written 5 months ago by saranpons350 • updated 5 months ago by a.zielezinski7.3k
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FASTQC problem - repetitive k-mer
kmer rna-seq fastqc written 5 months ago by blur50
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More specifics on Jellyfish -C methodology.
kmer jellyfish written 5 months ago by dlawre1410 • updated 5 months ago by Rob2.1k
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statistic tools of Kmer including invalid character
sequence kmer written 6 months ago by Derek Guan20 • updated 6 months ago by shenwei3563.3k
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Kmergenie fails to fit models with --diploid settings
kmer paired-end kmergenie miseq written 18 months ago by pepijn.kooij0 • updated 6 months ago by Rayan Chikhi1.2k
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Kmergenie k-mer estimate and multiple k-mers
assembly kmergenie kmer written 11 months ago by ed37160 • updated 6 months ago by Rayan Chikhi1.2k
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compiling kmergenie 1.7038. Is it possible?
compilation kmergenie kmer written 7 months ago by torsten0 • updated 6 months ago by Rayan Chikhi1.2k
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News: Kover will provide support via Biostars
news kmer machine learning kover written 15 months ago by Alexandre Drouin40 • updated 8 months ago by hfan2210
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Count and location of strings in fastq file reads
kmer suffix tree rna-seq written 13 months ago by rubic160 • updated 9 months ago by Lars Juhl Jensen11k
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My kmer distribution is weird
kmer distribution written 11 months ago by Picasa310 • updated 9 months ago by Biostar ♦♦ 20
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In Jellyfish, what does the "-C" switch do?
assembly kmer jellyfish written 22 months ago by Tom20 • updated 9 months ago by Biostar ♦♦ 20
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Confusion about the kmer coverage
spades kmer written 10 months ago by Picasa310 • updated 10 months ago by mastal5111.7k
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Errors with larger kmers
amplicon kmer written 14 months ago by hiimwalker0
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Variant detection - reference-free - kmer - RUFUS
variant detection kmer rufus written 15 months ago by Jan Hapala0 • updated 15 months ago by vchris_ngs4.0k
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How to decide Kmer size for RNA seq analysis using Trinity
trinity kmer rna-seq written 15 months ago by raya.girish20 • updated 15 months ago by iraun3.1k
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kmer alignment with mismatch
kmer alignmnt mismatch written 19 months ago by Vince80 • updated 19 months ago by dariober8.0k
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Finding most frequent k-mers in Fastq file
k-mer bioinformatics kmer sequencing written 19 months ago by murat0 • updated 19 months ago by Matt Shirley7.8k
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