Showing: kmerreset
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Increase the kmer size in IDBA_UD?
illumina ngs idba_ud idba kmer written 6 weeks ago by mail2steff30 • updated 6 weeks ago by Sej Modha2.9k
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262
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7 follow
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Judging best assembly
assembly cut off kmer coverage velvet written 11 weeks ago by deepti1rao0 • updated 10 weeks ago by Rohit1.3k
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Estimating genome size from k-mer histograms...
kmer next-gen genome size written 4.0 years ago by ab.tsubaki50 • updated 10 weeks ago by h.mon15k
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134
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kmer distribution curve shifts to right of poisson distribution
kmer poisson distribution written 3 months ago by deepti1rao0 • updated 3 months ago by h.mon15k
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244
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kmer distribution tiny peak at low coverage
assembly kmer distribution written 3 months ago by deepti1rao0 • updated 3 months ago by h.mon15k
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kmergenie input forward and reverse reads
kmergenie paired end kmer written 5 months ago by deepti1rao0 • updated 3 months ago by Biostar ♦♦ 20
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295
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fastqc file showing bad result for tile kmer
wgs tile kmer fail fastqc written 5 months ago by analytical0 • updated 5 months ago by YaGalbi1.3k
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2
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2
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0
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hg19 features -> mm10
mm10 watson.strand tsswindows kmer written 7 months ago by andreiareis198730 • updated 7 months ago by Jean-Karim Heriche15k
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Recommendation on k-mer counting package for multiple libraries?
kmer written 7 months ago by johnnytam10040 • updated 7 months ago by 5heikki7.3k
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551
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K-mer counter tool should write k-mers occurring only once to the output file?
kmer counter kmer written 10 months ago by saranpons350 • updated 10 months ago by Istvan Albert ♦♦ 77k
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TPM VS FPKM VS TMM and K-mer specific expression quantification
kmer rna-seq written 12 months ago by user230613260 • updated 10 months ago by Rob2.3k
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677
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Does Jellyfish support zipped fastq sequences?
genome assembly kmer written 11 months ago by comma19930 • updated 11 months ago by genomax49k
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FastQC kmer content output
kmer rna-seq fastqc written 11 months ago by Maria0 • updated 11 months ago by Istvan Albert ♦♦ 77k
2
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488
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1
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Representing a sequence as k-mer composition
sequence kmer dna written 13 months ago by mdurrant10 • updated 12 months ago by marsvetlana10
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2
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556
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6
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485
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5 follow
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Can anybody explain what this statement says?
kmer counter kmer written 14 months ago by saranpons350 • updated 14 months ago by a.zielezinski8.3k
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429
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FASTQC problem - repetitive k-mer
kmer rna-seq fastqc written 14 months ago by blur90
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340
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More specifics on Jellyfish -C methodology.
kmer jellyfish written 15 months ago by dlawre1430 • updated 15 months ago by Rob2.3k
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314
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statistic tools of Kmer including invalid character
sequence kmer written 15 months ago by Derek Guan20 • updated 15 months ago by shenwei3563.8k
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Kmergenie fails to fit models with --diploid settings
kmer paired-end kmergenie miseq written 2.3 years ago by pepijn.kooij0 • updated 15 months ago by Rayan Chikhi1.3k
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Kmergenie k-mer estimate and multiple k-mers
assembly kmergenie kmer written 20 months ago by ed37160 • updated 15 months ago by Rayan Chikhi1.3k
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compiling kmergenie 1.7038. Is it possible?
compilation kmergenie kmer written 16 months ago by torsten0 • updated 15 months ago by Rayan Chikhi1.3k
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News: Kover will provide support via Biostars
news kmer machine learning kover written 2.1 years ago by Alexandre Drouin50 • updated 17 months ago by hfan2210
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7
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Count and location of strings in fastq file reads
kmer suffix tree rna-seq written 22 months ago by rubic160 • updated 18 months ago by Lars Juhl Jensen11k
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My kmer distribution is weird
kmer distribution written 20 months ago by Picasa350 • updated 18 months ago by Biostar ♦♦ 20
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In Jellyfish, what does the "-C" switch do?
assembly kmer jellyfish written 2.6 years ago by Tom20 • updated 18 months ago by Biostar ♦♦ 20
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