Showing: kmerreset
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Abyss (Optimizing the parameter k)
assembly kmer abyss written 7 weeks ago by Mbillah100 • updated 7 days ago by Biostar ♦♦ 20
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112
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Bulk primer design
fasta bulk primers kmer written 15 days ago by DataFanatic110 • updated 15 days ago by Pierre Lindenbaum115k
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86
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Extracting related sequences from a FASTA file
sequence comparizon data mining kmer written 15 days ago by DataFanatic110 • updated 15 days ago by zx87546.1k
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error while creating kover dataset from fastq
kmer kover written 10 weeks ago by ekaterina.avershina0 • updated 8 weeks ago by Alexandre Drouin50
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Increase the kmer size in IDBA_UD?
illumina ngs idba_ud idba kmer written 7 months ago by mail2steff50 • updated 7 months ago by Sej Modha3.9k
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7 follow
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Judging best assembly
assembly cut off kmer coverage velvet written 8 months ago by deepti1rao20 • updated 8 months ago by Rohit1.3k
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Estimating genome size from k-mer histograms...
kmer next-gen genome size written 4.4 years ago by ab.tsubaki50 • updated 8 months ago by h.mon21k
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kmer distribution curve shifts to right of poisson distribution
kmer poisson distribution written 9 months ago by deepti1rao20 • updated 9 months ago by h.mon21k
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kmer distribution tiny peak at low coverage
assembly kmer distribution written 9 months ago by deepti1rao20 • updated 9 months ago by h.mon21k
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kmergenie input forward and reverse reads
kmergenie paired end kmer written 11 months ago by deepti1rao20 • updated 9 months ago by Biostar ♦♦ 20
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fastqc file showing bad result for tile kmer
wgs tile kmer fail fastqc written 11 months ago by analytical0 • updated 11 months ago by YaGalbi1.4k
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hg19 features -> mm10
mm10 watson.strand tsswindows kmer written 13 months ago by andreiareis198730 • updated 13 months ago by Jean-Karim Heriche17k
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Recommendation on k-mer counting package for multiple libraries?
kmer written 13 months ago by johnnytam100100 • updated 13 months ago by 5heikki7.9k
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K-mer counter tool should write k-mers occurring only once to the output file?
kmer counter kmer written 16 months ago by saranpons350 • updated 16 months ago by Istvan Albert ♦♦ 78k
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TPM VS FPKM VS TMM and K-mer specific expression quantification
kmer rna-seq written 18 months ago by user230613260 • updated 16 months ago by Rob2.9k
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Does Jellyfish support zipped fastq sequences?
genome assembly kmer written 17 months ago by comma19930 • updated 17 months ago by genomax59k
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FastQC kmer content output
kmer rna-seq fastqc written 17 months ago by Maria0 • updated 17 months ago by Istvan Albert ♦♦ 78k
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Representing a sequence as k-mer composition
sequence kmer dna written 19 months ago by mdurrant10 • updated 18 months ago by marsvetlana10
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5 follow
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Can anybody explain what this statement says?
kmer counter kmer written 20 months ago by saranpons350 • updated 20 months ago by a.zielezinski8.5k
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FASTQC problem - repetitive k-mer
kmer rna-seq fastqc written 20 months ago by blur90
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More specifics on Jellyfish -C methodology.
kmer jellyfish written 20 months ago by dlawre1430 • updated 20 months ago by Rob2.9k
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statistic tools of Kmer including invalid character
sequence kmer written 21 months ago by Derek Guan20 • updated 21 months ago by shenwei3564.3k
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Kmergenie fails to fit models with --diploid settings
kmer paired-end kmergenie miseq written 2.8 years ago by pepijn.kooij0 • updated 21 months ago by Rayan Chikhi1.4k
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Kmergenie k-mer estimate and multiple k-mers
assembly kmergenie kmer written 2.2 years ago by ed37160 • updated 21 months ago by Rayan Chikhi1.4k
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