Showing: kmerreset
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7
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3
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2.1k
views
3
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Count and location of strings in fastq file reads
kmer suffix tree rna-seq written 3.3 years ago by rubic180 • updated 2.9 years ago by Lars Juhl Jensen11k
2
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3
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1.6k
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3
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3
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3
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441
views
3
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Bulk primer design
fasta bulk primers kmer written 11 months ago by DataFanatic140 • updated 11 months ago by Pierre Lindenbaum124k
12
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3
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590
views
6 follow
3
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Finding 16 mer not present in GRCh38
genome kmer written 11 months ago by Srw30 • updated 10 months ago by Kevin Blighe51k
17
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2
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2.0k
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2
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Blog: Fast kmer reverse complement code using bit tricks
kmer reverse-complement gatb code blog written 5.2 years ago by Rayan Chikhi1.4k • updated 10 months ago by martinsteinegger30
4
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2
answers
1.2k
views
2
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In Jellyfish, what does the "-C" switch do?
assembly kmer jellyfish written 4.0 years ago by Tom20 • updated 3.0 years ago by Biostar ♦♦ 20
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2
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2.4k
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2
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kmer alignment with mismatch
kmer alignmnt mismatch written 3.8 years ago by Vince130 • updated 3.8 years ago by dariober10k
0
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2
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1.6k
views
2
answers
Kmergenie k-mer estimate and multiple k-mers
assembly kmergenie kmer written 3.1 years ago by ed37160 • updated 2.7 years ago by Rayan Chikhi1.4k
3
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2
answers
1.3k
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2
answers
compiling kmergenie 1.7038. Is it possible?
compilation kmergenie kmer written 2.8 years ago by torsten0 • updated 2.7 years ago by Rayan Chikhi1.4k
14
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2
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1.0k
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2
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6
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2
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891
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5 follow
2
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Can anybody explain what this statement says?
kmer counter kmer written 2.6 years ago by saranpons370 • updated 2.6 years ago by a.zielezinski8.9k
8
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2
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3.2k
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2
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TPM VS FPKM VS TMM and K-mer specific expression quantification
kmer rna-seq written 2.5 years ago by user230613280 • updated 2.3 years ago by Rob3.6k
2
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2
answers
2.2k
views
2
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2
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2
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892
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7 follow
2
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Judging best assembly
assembly cut off kmer coverage velvet written 19 months ago by deepti1rao30 • updated 19 months ago by Rohit1.4k
4
votes
2
answers
209
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2
answers
jellyfish kmer counting discrepancy
genome count kmer rna-seq jellyfish written 9 weeks ago by 7ehuang0 • updated 9 weeks ago by Istvan Albert ♦♦ 81k
2
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1
answer
2.8k
views
1
answer
Estimating genome size from k-mer histograms...
kmer next-gen genome size written 5.4 years ago by ab.tsubaki50 • updated 19 months ago by h.mon28k
3
votes
1
answer
1.5k
views
1
answer
Any tools to count kmers in tumor/normal (contrast) pairs of samples?
next-gen kmer written 5.1 years ago by 141341254653464453.5k • updated 5.1 years ago by Sean Davis25k
1
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1
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1.4k
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1
answer
4
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1
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3.6k
views
1
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Which peak is homozygous and heterozygous in Kmer plot for Genome estimation
genome assembly kmer written 4.8 years ago by Prakki Rama2.3k • updated 4.8 years ago by thackl2.7k
1
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1
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1.1k
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1
answer
4
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1
answer
874
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1
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Assessing diversity of random oligonucleotides
oligonucleotides sequence kmer random written 4.4 years ago by dariober10k • updated 4.3 years ago by Vincent Laufer1.1k
1
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1
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1.4k
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1
answer
2
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1
answer
2.1k
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1
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Finding most frequent k-mers in Fastq file
k-mer bioinformatics kmer sequencing written 3.8 years ago by murat0 • updated 3.8 years ago by Matt Shirley9.2k
0
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1
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1.4k
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1
answer
Kmergenie fails to fit models with --diploid settings
kmer paired-end kmergenie miseq written 3.7 years ago by pepijn.kooij0 • updated 2.7 years ago by Rayan Chikhi1.4k
4
votes
1
answer
1.3k
views
1
answer
News: Kover will provide support via Biostars
news kmer machine learning kover written 3.5 years ago by Alexandre Drouin60 • updated 2.9 years ago by hfan2240
2
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1
answer
2.5k
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1
answer
How to decide Kmer size for RNA seq analysis using Trinity
trinity kmer rna-seq written 3.4 years ago by raya.girish20 • updated 3.4 years ago by iraun3.6k
0
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1
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1.3k
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1
answer
Variant detection - reference-free - kmer - RUFUS
variant detection kmer rufus written 3.4 years ago by Jan Hapala0 • updated 3.4 years ago by ivivek_ngs4.8k
4
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1
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1.4k
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1
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0
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1
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5.8k
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1
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3
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1
answer
4.4k
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1
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Confusion about the kmer coverage
spades kmer written 3.0 years ago by Picasa470 • updated 3.0 years ago by mastal5112.0k
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