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Problem with BiomaRt::useMart function Landscape Genomics

plant usamart landcape genomics biomart ensembl written 7 weeks ago by simone.castellana • 10 • updated 7 weeks ago by Emily_Ensembl ♦ 21k

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Recent Replies

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Never seen it, and cannot find it right now via a search engine. You could e-mail Roche technical...
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http://petang.cgu.edu.tw/Bioinfomatics/Lecture/0_HTS/2015/04/
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What is the relationship between `CG2918` and `dmel_X `? Are they simply in order as @rpolicastro...
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Separate to my answer below, I would contend that the right hand alignment is all that realistic ...
C: K-mer sequencing vs sequence-alignment by Joe ♦ 18k
You wouldn't generally use kmers this short as the odds of finding spurious matches becomes massi...
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So it was just the compressed file then? I hope everything goes smoothly hereonforth.
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You have 2 colours and 2 groups? If that is the case, then this should work myColors[condn] ...
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Never realized `case_when()` is a thing. TIL. Thank you!!
C: K-mer sequencing vs sequence-alignment by GenoMax ♦ 94k
If you intend to identify genes then using this toy example is inappropriate. One would need to u...
C: Adding gene names to fasta file by rpolicastro ♦ 3.2k
Are the gene names in the file the same order as the fasta entry for which it matches?
C: Count matrices correction before integrating single-cell RNA-seq datasets by rpolicastro ♦ 3.2k
Is this from a paper or a collaborator?
C: K-mer sequencing vs sequence-alignment by ATpoint ♦ 44k
Cross-posted: https://bioinformatics.stackexchange.com/questions/15234/k-mer-sequencing-vs-sequen...

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