Showing: ldreset
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VCFtools version for LD calculations specifying bin size
vcftools ld written 29 days ago by Stephanie0 • updated 25 days ago by Kevin Blighe30k
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90
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Find all SNPs in linkage disequilibrium
ensembl snp ld written 2.6 years ago by johanne.hh0 • updated 4 weeks ago by RamRS18k
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SNPs in high LD after LD pruning
ld snprelate written 5 weeks ago by Ana100 • updated 5 weeks ago by Kevin Blighe30k
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873
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Paper for Plink LD clumping 'greedy algorithm'
gwas greedy plink ld clumping written 21 months ago by Lou10 • updated 5 weeks ago by Biostar ♦♦ 20
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144
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Multiple Haplotype Phasing Solutions in Plink
plink ld written 7 weeks ago by Shicheng Guo6.9k • updated 7 weeks ago by chrchang5233.9k
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Use LD statistics to find proxy SNP
vcf snp ld written 2.6 years ago by sabir.saluja0 • updated 4 months ago by Biostar ♦♦ 20
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Create linkage disequilibrium file
locusexplorer snp linkage disequilibrium plink ld written 5 months ago by Dhana60 • updated 5 months ago by zx87545.3k
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Obtain the LD matrix from a list of SNP
snp ld written 15 months ago by janhuang.cn90 • updated 5 months ago by zx87545.3k
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Plotting Linkage Disequilibrium Decay Across The Genome
snps plink ld plot written 5.0 years ago by Javier2013110 • updated 8 months ago by hfang40
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Negative and positive linkage disequilibrium
linkage gwas plink ld written 2.0 years ago by fatima10 • updated 8 months ago by seta1.0k
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Plink: compute LD between all SNP pairs
snp linkage disequilibrium plink ld written 8 months ago by rmf370 • updated 8 months ago by chrchang5233.9k
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367
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LD between CNVs and exterior SNPs
snp cnv ld written 9 months ago by Ana100
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Haplotype LD block without genotypes
gwas haplotype ld written 11 months ago by alessandrotestori7300 • updated 10 months ago by sathish.periyasamy20
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linkage disequilibrium analysis
different chromosomes snps ld written 11 months ago by tarek.mohamed180 • updated 11 months ago by Kevin Blighe30k
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How to plot LD decay?
ld r2 written 2.4 years ago by akang90 • updated 11 months ago by gezgrm0
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ld matrix in plink
matrix ld written 14 months ago by janhuang.cn90 • updated 12 months ago by DataFanatic110
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