Showing: ldreset
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Use LD statistics to find proxy SNP
vcf snp ld written 2.5 years ago by sabir.saluja0 • updated 3 months ago by Biostar ♦♦ 20
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Create linkage disequilibrium file
locusexplorer snp linkage disequilibrium plink ld written 3 months ago by Dhana60 • updated 3 months ago by zx87544.8k
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Obtain the LD matrix from a list of SNP
snp ld written 13 months ago by janhuang.cn90 • updated 3 months ago by zx87544.8k
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Plotting Linkage Disequilibrium Decay Across The Genome
snps plink ld plot written 4.8 years ago by Javier2013110 • updated 6 months ago by hfang40
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Negative and positive linkage disequilibrium
linkage gwas plink ld written 22 months ago by fatima10 • updated 6 months ago by seta1000
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Plink: compute LD between all SNP pairs
snp linkage disequilibrium plink ld written 6 months ago by rmf320 • updated 6 months ago by chrchang5233.7k
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LD between CNVs and exterior SNPs
snp cnv ld written 7 months ago by Ana100
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Haplotype LD block without genotypes
gwas haplotype ld written 9 months ago by alessandrotestori7300 • updated 8 months ago by sathish.periyasamy20
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linkage disequilibrium analysis
different chromosomes snps ld written 9 months ago by tarek.mohamed180 • updated 9 months ago by Kevin Blighe26k
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How to plot LD decay?
ld r2 written 2.2 years ago by akang90 • updated 9 months ago by gezgrm0
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ld matrix in plink
matrix ld written 12 months ago by janhuang.cn90 • updated 10 months ago by DataFanatic100
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plink calculating LD using R2 command
plink ld r2 written 10 months ago by janhuang.cn90 • updated 10 months ago by pfs250
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Haploview cannot connect to the internet?
haploview ld written 13 months ago by Sheila240 • updated 13 months ago by Pierre Lindenbaum111k
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Is it more correct to use r2 or D' for selecting SNPs in LD?
linkage disequilibrium ld written 17 months ago by Milos Pjanic20 • updated 15 months ago by Vincent Laufer980
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LD calculation using LD plugin for VEP
linkage disequilibrium vep ld written 16 months ago by eXpander90 • updated 16 months ago by Ben_Ensembl600
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Paper for Plink LD clumping 'greedy algorithm'
gwas greedy plink ld clumping written 19 months ago by Lou0 • updated 17 months ago by Biostar ♦♦ 20
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