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<prev • 237 results • page 1 of 8 • next >
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How to handle Log2 Transformation that creates Nan Values
geo R microarray limma written 3 days ago by farzaneafzali • 0 • updated 3 days ago by WouterDeCoster ♦ 27k
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5 follow
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Design/contrast matrix for Multivariate experimental design in limma
design matrix limma deg written 8 days ago by 1234anjalianjali1234 • 30 • updated 8 days ago by h.mon ♦ 13k
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differential expression analysis from microarray data
microarray limma written 8 days ago by au.rinki.bio • 0
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57
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differential expression from multiple sequencing panels
limma rna-seq differential expression written 13 days ago by glocke01 • 160
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The result of differential gene expression analysis should be extracted based on adj.p.value ?
R bioconductor limma microarray toptable() written 3 months ago by R.A. • 20 • updated 13 days ago by swbarnes2 ♦ 3.4k
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Design matrix for edge R analysis?
R bioconductor limma edger statistics written 15 days ago by star • 50
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142
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removebatcheffect give same foldchange
R limma written 25 days ago by skadum • 20
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Differential Expression of Splice Junctions using voom-limma/voom-diffSplice
de limma rna-seq splice junctions written 11 months ago by stefanos.bamopoulos • 30 • updated 19 days ago by Biostar ♦♦ 20
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Analysing CGH data from GEO Dataset
R geoquery limma cgh written 6 weeks ago by salvatore.raieli2 • 0 • updated 19 days ago by zx8754 ♦ 4.1k
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How to do within-sample gene comparisons with limma-voom?
limma rna-seq voom written 20 days ago by samey • 10
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Extract genomic feature related to point from mean-variance plot in limma/voom
limma voom written 21 months ago by James Ashmore • 2.3k • updated 25 days ago by h.mon ♦ 13k
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Limma design and makeContrasts
design makecontrasts limma written 28 days ago by Matina • 90 • updated 25 days ago by theobroma22 • 1.1k
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Differential Gene Analysis
limma rna-seq dge written 5 weeks ago by kalyanimeha • 20
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5 follow
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Why different DEGs between my result and the author's result?
microarray differential gene expression limma written 5 weeks ago by fernardo • 100 • updated 5 weeks ago by dariober ♦ 9.0k
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Differential Expression fro GEO Data
geo R limma rna-seq written 5 weeks ago by kalyanimeha • 20 • updated 5 weeks ago by Sean Davis ♦ 24k
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Help with designing limma contrast matrix
software error limma written 6 weeks ago by F • 3.0k
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Differential Expression Analysis on miRNA Normalized data
R normalization limma rna-seq mirna written 8 weeks ago by joldare • 10
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RNASeq: Differential gene expression and qqplot
deseq2 rna-seq differential gene expression limma written 8 weeks ago by rmf • 250
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Differential expression of RNA seq data using EdgeR
gene R rna-seq edger limma written 9 weeks ago by yoongi1565 • 0 • updated 8 weeks ago by genomax ♦ 46k
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DE analysis of lncRNA from C elegans
deseq2 limma differential expression lncrna written 12 weeks ago by Assa Yeroslaviz • 1.1k • updated 12 weeks ago by swbarnes2 ♦ 3.4k
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157
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how to set the design in limma
limma written 3 months ago by Learner • 90
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233
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Microarray. Differential expression with only one condition.
R limma rna microarray differential expresssion written 3 months ago by Pol • 60 • updated 3 months ago by Friederike • 1.3k
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Doubt about batch effect and gene expression analysis
gene expression limma batch written 3 months ago by Picasa • 340 • updated 3 months ago by Kevin Blighe ♦ 17k
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9 follow
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Why Cannot Limma Package Do Differential Expression Between Two Samples Without Replication?
replicates differential-expression limma affymetrix written 4.9 years ago by shangzhong0619 • 20 • updated 3 months ago by Biostar ♦♦ 20
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Extract gene ids from DESeq2 result dataframe for specific comparison based on vennDiagram
venndiagram deseq2 limma rna-seq venn written 4 months ago by bioinfo8 • 90 • updated 4 months ago by Kevin Blighe ♦ 17k
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Microarray analysis in limma
R limma written 4 months ago by Leite • 220
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R x commercial softwares for microarray analyzes
R limma microarray analyzes written 4 months ago by Joe Kherery • 0
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223
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using limma for analyzing RPPA
rppa limma differential expression written 4 months ago by smt8n • 0
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255
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Missing samples (observations) in time series data
timeseries microarray limma written 5 months ago by prathyushareddy87 • 0 • updated 4 months ago by Kevin Blighe ♦ 17k
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Multifactor design result extraction in voom limma
voom deseq2 limma deseq written 4 months ago by aarthir239 • 0
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