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<prev • 113 results • page 1 of 4 • next >
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Denovo assembly or Reference based assembly for identifying novel lncRNAs
stringtie hisat2 denovoassembly rna-seq lncrna written 9 weeks ago by newbie • 90
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108
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predict miRNA-lncRNA interaction based on lncRNA sequence
lncrna mirna written 3 months ago by robinycfang • 0
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109
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Physical interaction of long non-coding RNAs with target genes
target genes physical interaction lncrna written 4 months ago by seta • 1.4k
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120
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What is the cutoff to identify the potential protein-coding gene targets of lncRNAs
rna-seq lncrna written 4 months ago by aboozar.soorni • 30
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Validation of protein-coding gene and lncRNA correlation
correlation rna-seq non-coding rna lncrna written 4 months ago by seta • 1.4k • updated 4 months ago by caggtaagtat • 1.3k
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How to find the annotation file for GPL16956 platform of Arraystar human lncRNA microarray V3 (Probe Name Version)?
bioinformatics probe annotation microarray lncrna written 4 months ago by daphneolivia39 • 0
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How to detect cis and trans protein coding genes of interested lncRNAs?
wgcna chip-seq rna-seq lncrna written 4 months ago by newbie • 90 • updated 4 months ago by i.sudbery ♦ 9.4k
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Connecting LncRNAs and Pathways
pathway disease network analysis lncrna written 5 months ago by Manu Madhavan • 20
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how can I get novel long non coding RNA from RNA-seq data?
rna-seq lncrna written 5 months ago by eli • 0 • updated 5 months ago by Michael Dondrup ♦ 47k
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How to create a GSEA enrichment plot for the phenotypes in R?
R rna-seq gsea lncrna written 5 months ago by newbie • 90 • updated 5 months ago by Barry Digby • 500
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Classification of long non-coding RNAs
non-coding rna lncrna written 5 months ago by seta • 1.4k • updated 5 months ago by genomax ♦ 91k
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186
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long-non coding RNA and protein-coding genes correlation
co-expression correlation rna-seq lncrna written 5 months ago by seta • 1.4k • updated 5 months ago by Carlo Yague • 5.0k
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lncRNA differential expression analysis
rna-seq differential expression lncrna written 6 months ago by seta • 1.4k • updated 6 months ago by Kevin Blighe ♦ 66k
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how to predict lncRNA based on gene symbol?
lncrna written 2.8 years ago by a511512345 • 120 • updated 6 months ago by Biostar ♦♦ 20
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DE lncRNA and mRNA correlation analysis
mrna correlation analysi lncrna written 6 months ago by seta • 1.4k
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bedtools usage to extract the non overlaps between two gtfs
gtf bedtools intersect mitranscriptome lncrna written 6 months ago by newbie • 90
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213
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lncRNA prediction using CPAT?
cpat lncrna written 7 months ago by mathavanbioinfo • 50
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Job: PhD studentship in CRISPR bioinformatics and cancer genomics
next-gen cancer job sequencing crispr lncrna written 7 months ago by rory.johnson • 20
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How to analyze scRNA-seq data to compare lncRNA and mRNA
mrna lncrna rna-seq coexpression written 9 months ago by Kedu • 0
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Stringtie with Gencode gtf file doesn't give any gene_ids or transcript_ids?
gtf stringtie rna-seq gencode lncrna written 2.7 years ago by Biologist • 190 • updated 10 months ago by yiren • 0
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What is wrong with my Nanopore lncRNA pipeline?
lncrna oxford nanopore written 11 months ago by niradsp • 0
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254
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Galaxy DE lncRNA analysis pipeline
galaxy rna-seq lncrna written 12 months ago by dnzkursun • 10 • updated 12 months ago by Biostar ♦♦ 20
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lncRNA and mRNA regulation network database
mrna regulation lncrna written 13 months ago by Shicheng Guo • 8.4k • updated 13 months ago by Kevin Blighe ♦ 66k
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What is the differences in index building by hisat with or without exon, splicing variant files?
lncrna rna-seq hisat2 written 13 months ago by mathavanbioinfo • 50
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Novel lncRNA identification and quantification RNA seq?
sequencing assembly lncrna rna-seq hisat2 written 13 months ago by mathavanbioinfo • 50
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Noncode transcripts with strand information as .
lncrna written 13 months ago by yasokannan93 • 20
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lncRNA and circular RNA identification softwares
rnaseq software circrna lncrna written 13 months ago by Rituriya • 30
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Currently what is the best tool for long non-coding RNA annotation? Is FEELnc a strong contender?
feelnc rna-seq lncrna written 2.1 years ago by sieva1 • 20 • updated 13 months ago by elsoja • 120
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lncRNA Detection with Tuxedo Suite
assembly stringtie tuxedo rna-seq lncrna written 14 months ago by 27atcggcta27 • 160
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Tool: Transcription Factor Binding Sites, Motifs and Expression Profiles from ~10200 ChIP-seq and ~20000 RNA-seq samples
transcription factor lncrna chip-seq tool mirna written 4.1 years ago by lsp03yjh • 800 • updated 15 months ago by angajalaanusha • 10
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