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<prev • 117 results • page 1 of 4 • next >
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How to perform the lncRNA enrichment analysis?
enrichment gene ontology lncrna written 9 weeks ago by mathavanbioinfo • 60 • updated 6 weeks ago by Qiongyi • 100
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How to identify the 300 kb upstream and downstream genes of lncRNAs?
target genes lncrna upstream rna-seq downstream written 6 weeks ago by mathavanbioinfo • 60 • updated 6 weeks ago by JC ♦ 12k
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163
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How to extract upstream and downstream of lncRNA in particular range?
gtf bed rna-seq hommer lncrna written 7 weeks ago by mathavanbioinfo • 60 • updated 7 weeks ago by jordi.planells • 330
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112
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How to find the gene name and classification using Ensembl ID?
genome ensembl lncrna written 9 weeks ago by mathavanbioinfo • 60 • updated 9 weeks ago by Jean-Karim Heriche ♦ 24k
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188
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Denovo assembly or Reference based assembly for identifying novel lncRNAs
stringtie hisat2 denovoassembly rna-seq lncrna written 4 months ago by newbie • 90
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171
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predict miRNA-lncRNA interaction based on lncRNA sequence
lncrna mirna written 6 months ago by robinycfang • 0
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152
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Physical interaction of long non-coding RNAs with target genes
target genes physical interaction lncrna written 6 months ago by seta • 1.4k
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163
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What is the cutoff to identify the potential protein-coding gene targets of lncRNAs
rna-seq lncrna written 7 months ago by aboozar.soorni • 30
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181
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Validation of protein-coding gene and lncRNA correlation
correlation rna-seq non-coding rna lncrna written 7 months ago by seta • 1.4k • updated 7 months ago by caggtaagtat • 1.4k
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How to find the annotation file for GPL16956 platform of Arraystar human lncRNA microarray V3 (Probe Name Version)?
bioinformatics probe annotation microarray lncrna written 7 months ago by daphneolivia39 • 0
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197
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How to detect cis and trans protein coding genes of interested lncRNAs?
wgcna chip-seq rna-seq lncrna written 7 months ago by newbie • 90 • updated 7 months ago by i.sudbery ♦ 10k
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148
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Connecting LncRNAs and Pathways
pathway disease network analysis lncrna written 7 months ago by Manu Madhavan • 20
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how can I get novel long non coding RNA from RNA-seq data?
rna-seq lncrna written 8 months ago by eli • 0 • updated 8 months ago by Michael Dondrup ♦ 48k
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How to create a GSEA enrichment plot for the phenotypes in R?
R rna-seq gsea lncrna written 8 months ago by newbie • 90 • updated 8 months ago by Barry Digby • 630
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179
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Classification of long non-coding RNAs
non-coding rna lncrna written 8 months ago by seta • 1.4k • updated 8 months ago by GenoMax ♦ 94k
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256
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long-non coding RNA and protein-coding genes correlation
co-expression correlation rna-seq lncrna written 8 months ago by seta • 1.4k • updated 8 months ago by Carlo Yague ♦ 5.5k
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268
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lncRNA differential expression analysis
rna-seq differential expression lncrna written 8 months ago by seta • 1.4k • updated 8 months ago by Kevin Blighe ♦ 69k
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how to predict lncRNA based on gene symbol?
lncrna written 3.1 years ago by a511512345 • 120 • updated 9 months ago by Biostar ♦♦ 20
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240
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DE lncRNA and mRNA correlation analysis
mrna correlation analysi lncrna written 9 months ago by seta • 1.4k
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242
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bedtools usage to extract the non overlaps between two gtfs
gtf bedtools intersect mitranscriptome lncrna written 9 months ago by newbie • 90
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268
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lncRNA prediction using CPAT?
cpat lncrna written 10 months ago by mathavanbioinfo • 60
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Job: PhD studentship in CRISPR bioinformatics and cancer genomics
next-gen cancer job sequencing crispr lncrna written 10 months ago by rory.johnson • 20
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How to analyze scRNA-seq data to compare lncRNA and mRNA
mrna lncrna rna-seq coexpression written 12 months ago by Kedu • 0
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Stringtie with Gencode gtf file doesn't give any gene_ids or transcript_ids?
gtf stringtie rna-seq gencode lncrna written 3.0 years ago by Biologist • 190 • updated 13 months ago by yiren • 0
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283
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What is wrong with my Nanopore lncRNA pipeline?
lncrna oxford nanopore written 14 months ago by niradsp • 0
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297
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Galaxy DE lncRNA analysis pipeline
galaxy rna-seq lncrna written 15 months ago by dnzkursun • 10 • updated 14 months ago by Biostar ♦♦ 20
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lncRNA and mRNA regulation network database
mrna regulation lncrna written 16 months ago by Shicheng Guo • 8.5k • updated 15 months ago by Kevin Blighe ♦ 69k
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377
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What is the differences in index building by hisat with or without exon, splicing variant files?
lncrna rna-seq hisat2 written 15 months ago by mathavanbioinfo • 60
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Novel lncRNA identification and quantification RNA seq?
sequencing assembly lncrna rna-seq hisat2 written 16 months ago by mathavanbioinfo • 60
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215
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Noncode transcripts with strand information as .
lncrna written 16 months ago by yasokannan93 • 20
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