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Problems with the reference genome in Stringtie
stringtie reference genome rna-seq lncrna written 27 days ago by iraia.munoa • 60 • updated 27 days ago by Devon Ryan ♦ 88k
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unstranded RNA-seq lib for ncRNA prediction
rna-seq lncrna written 4 weeks ago by Sam • 100
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How to get correlation coefficient value between the genes in the WGCNA module network?
wgcna R rna-seq coexpressionnetwork lncrna written 6 weeks ago by Vasu • 320
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Estimating gene set enrichment using Fishers exact test
fisherstest rna-seq gsea lncrna written 6 weeks ago by Biologist • 150
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Differential Expression of lncRNAs in Brain --- Can a database aid my search?
database differential expression lncrna written 8 weeks ago by JourneyToAbyss • 50 • updated 8 weeks ago by piyushjo • 110
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How to perform lncRNA differential gene expression analysis (unstranded)?
deseq2 lncrna unstranded rna-seq lincrnas written 8 weeks ago by mmitra • 30 • updated 8 weeks ago by JC ♦ 7.6k
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Job: Postdoc position in Bioinformatics (UCSF Benioff Children's Hospital Oakland)
bioinformatics postdoc job rna-seq lncrna written 10 weeks ago by djawaheer • 10
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181
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FEELnc and how to work with the results
feelnc rna-seq lncrna written 3 months ago by iraia.munoa • 60
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Tool: Deciphering LncRNA-Target, NcRNA-Target, Pseudogene-Target and mRNA-Target Interactions from RNA Interactome Sequencing Data
lncrna interactions rna interactome starbase tool written 3 months ago by lsp03yjh • 740
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Tool: Discovering protein-lncRNA interactions from large-scale CLIP-Seq and TCGA Cancer datasets
tool cancer rna-seq clip-seq rbp lncrna written 4.2 years ago by lsp03yjh • 740
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Tool: RNA Modification Database and Epitranscriptome Sequencing Data
tool epitranscriptome rna modification rbp m6a lncrna written 3.4 years ago by lsp03yjh • 740 • updated 3 months ago by africainterpol101 • 0
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Correlation between lncRNAs and mRNA from two microarrays?
mrna correlation microarray lncrna written 3.7 years ago by kandoigaurav • 120 • updated 4 months ago by Biostar ♦♦ 20
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Job: Seeking Bioinformatics Postdoc for Exciting Project on Long Noncoding RNAs
long noncoding rna lncrna job annotation written 4 months ago by rory.johnson • 10
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Tool: Transcription Factor Binding Sites, Motifs and Expression Profiles from ~10200 ChIP-seq and ~20000 RNA-seq samples
transcription factor lncrna chip-seq tool mirna written 2.5 years ago by lsp03yjh • 740
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Correlation between lncRNA and protein coding genes
R genes correlation rna-seq lncrna written 5 months ago by Vasu • 320 • updated 5 months ago by Nicolas Rosewick ♦ 7.4k
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LncRNA Differential Expression and Analysis of lncRNA and mRNA co-expression.
co-expression alignment deseq2 rna-seq lncrna written 5 months ago by conor93 • 20 • updated 5 months ago by Kevin Blighe ♦ 39k
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10 follow
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Forum: lincRNA analysis pipeline and relevant database
forum lncrna written 5 months ago by Shicheng Guo • 7.4k • updated 5 months ago by abhijitpaithane2754 • 0
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14 follow
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Tool: Pan-Cancer Analysis And Networks Of LncRNAs, MiRNAs, circRNAs, CeRNAs And RNA-Binding Proteins From TCGA 32 Cancer Types and CLIP-seq data
tool cancer tcga rna-binding proteins mirna lncrna written 5.1 years ago by lsp03yjh • 740
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LncRNA2Function unavailable - mirror?.
lncrna2function lncrna rna-seq data written 5 months ago by Berghopper • 10
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Help setting up lncRNA-screen from github
bioinformatics github chip-seq rna-seq lncrna written 6 months ago by natanamorim.moraes • 10 • updated 6 months ago by jared.andrews07 • 1.9k
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How comprehensive is genode lncrna anotation for mouse?
mouse gencode lncrna written 6 months ago by piyushjo • 110
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Forum: Looking for co-author with Bioinformatics background for paper using Machine Learning in Biology
feelnc neural networks forum rnn lncrna written 6 months ago by sieva1 • 0
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Currently what is the best tool for long non-coding RNA annotation? Is FEELnc a strong contender?
feelnc rna-seq lncrna written 6 months ago by sieva1 • 0 • updated 6 months ago by jared.andrews07 • 1.9k
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How to construct Co-expression network between Coding and lncRNAs?
R correlation rna-seq co-expression network lncrna written 8 months ago by Biologist • 150 • updated 8 months ago by Kevin Blighe ♦ 39k
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LncRNA isoforms RNA-seq
lncrnas isoforms rna-seq lncrna written 9 months ago by Martin B. • 10
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plant long non-coding RNA
rna-seq lncrna written 9 months ago by Sam • 100 • updated 9 months ago by colindaven • 1.1k
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how to use WGCNA to predict lncRNA targets?
wgcna lncrna written 10 months ago by fanglujing • 30
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Any recommendation for novel lncRNA pipelines from RNAseq data?
lncrna written 11 months ago by Daisy • 60 • updated 10 months ago by Biostar ♦♦ 20
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Job: Post-doc positions on non-coding RNAs in neurological diseases at RIKEN Yokohama Japan
crispr gwas job single cell lncrna written 10 months ago by chungchau.hon • 10
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Help explain novel lncRNA results
rna-seq lncrna written 10 months ago by Sharon • 420
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