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2
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1
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110
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1
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Merging PacBio and Nanopore reads
assembly next-gen long reads nanopore pacbio written 19 days ago by Sbrillo • 0 • updated 10 days ago by harishk0201 • 110
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0
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157
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0
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samtools mpileup quality filtering for long read ONT data
samtools long reads ont written 3 months ago by regue.hadrien • 30
6
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2
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279
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2
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How does long reads help in the repeated regions of the genome
bioinformatics short reads long reads ont illumina written 5 months ago by Ashi • 10 • updated 5 months ago by Jorge Amigo ♦ 12k
1
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0
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207
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0
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Oxford nanopore sequnces with unequal base content?
forum sequence long reads nanopore sequencing written 6 months ago by alexanderbeatovic450 • 0
1
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2
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241
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2
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Good Books/Resources to learn metagenomic analysis?
assembly metagenomics bacteria long reads nanopore written 6 months ago by jimpinney • 10 • updated 6 months ago by Mensur Dlakic • 9.1k
1
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0
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191
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0
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Subset long reads and optimal coverage
assembly long reads written 10 months ago by Picasa • 590 • updated 9 months ago by Biostar ♦♦ 20
1
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1
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619
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1
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Mapping (minimap2) nanopore reads to parent species to confirm hybridization
minimap2 parents hybrids long reads written 11 months ago by ricardoguerreiro2121 • 60
1
vote
1
answer
316
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1
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Multiple mapping with longreads - Get primary mapping
minimap2 long reads samtools mapping pacbio written 11 months ago by ricardoguerreiro2121 • 60 • updated 11 months ago by WouterDeCoster ♦ 45k
9
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0
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2.9k
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5 follow
0
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Tutorial: Using the MinION MinKNOW software on Ubuntu 1604
tutorial minion long reads oxford nanopore written 20 months ago by colindaven • 2.6k
0
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0
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169
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0
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Proportion of long-read sequencing out of all sequencing?
long reads written 13 months ago by liorglic • 340
5
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1
answer
681
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1
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Scaffolding a genome with long reads.
assembly long reads pacbio written 16 months ago by Picasa • 590 • updated 16 months ago by lieven.sterck ♦ 10k
3
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1
answer
675
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1
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.bam format is not enough for mapped long reads
file formats alignment long reads written 18 months ago by anastasiia.satyr • 20 • updated 17 months ago by Biostar ♦♦ 20
0
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0
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581
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0
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Direct cDNA nanopore strandness discover - 2D approach
direct cdna long reads nanopore strand written 21 months ago by ruisergioluis • 30
1
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0
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897
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0
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Job: Postdocs/Scientists: Long Reads, Epigenomes and Human Diseases
epigenomics chip-seq long reads rna-seq job written 22 months ago by fanggang • 100
5
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1
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2.1k
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1
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QC of Oxford Nanopore fastq files with NanoPlot
long reads tool oxford nanopore written 21 months ago by s.m.frampton • 10 • updated 21 months ago by WouterDeCoster ♦ 45k
2
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1
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1.1k
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1
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Binning Tools for Long Reads/Contigs
long reads metagenomics contigs binning written 24 months ago by vijinim • 100
8
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0
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986
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5 follow
0
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Using Bandage to finish ambiguous long-read assembly?
unicycler assembly long reads bandage written 2.2 years ago by predeus • 1.5k • updated 2.1 years ago by Biostar ♦♦ 20
2
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1
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1.1k
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1
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Transcript assembly with nanopore long reads
assembly long reads transcriptome written 2.1 years ago by caggtaagtat • 1.4k • updated 2.1 years ago by colindaven • 2.6k
2
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0
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1.3k
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0
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Job: Postdoc & Scientist (New York City): Microbiome and Human Diseases
microbiome metagenomics metagenome long reads job written 2.5 years ago by fanggang • 100
0
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0
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569
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0
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Possible to call variants from PacBio reads from a mixed sample?
long reads pacbio snp written 2.4 years ago by nchuang • 250
2
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1
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2.3k
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1
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Raw Data from Oxford Nanopore Sequencing Technology
naopore ngs minion long reads rawdata written 2.8 years ago by midox • 260 • updated 2.8 years ago by h.mon ♦ 32k
16
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4.6k
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10 follow
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Tool: NanoPack: Scripts for long read sequencing data processing and analysis: NanoPlot, NanoFilt, NanoStat, NanoLyse, NanoComp
long reads tool pacbio oxford nanopore written 3.5 years ago by WouterDeCoster ♦ 45k
6
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0
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2.4k
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5 follow
0
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RNA-seq long reads vs. transcripts
assembly long reads rna-seq written 3.1 years ago by tunl • 60
4
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0
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870
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0
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Length distribution of PacBio RNA-seq
long reads rna-seq pacbio written 3.5 years ago by tunl • 60
5
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1
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1.0k
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1
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Question about downloading RNA-seq long reads and short reads for the same sample
long reads rna-seq pacbio written 3.5 years ago by tunl • 60 • updated 3.5 years ago by magdoll • 20
0
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1
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763
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1
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Using long reads to find a combination of mutations
long reads nanopore snp variants written 3.6 years ago by eayasi • 0 • updated 3.6 years ago by colindaven • 2.6k
3
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0
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1.8k
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0
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Use kallisto with ONT (nanopore) cDNA long reads
long reads kallisto nanopore written 3.6 years ago by Nicolas Rosewick ♦ 9.3k
11
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1
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2.5k
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9 follow
1
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Oxford Nanopore BWA MEM alignments
long reads bwa mem bwa oxford nanopore written 3.9 years ago by QVINTVS_FABIVS_MAXIMVS • 2.4k • updated 3.9 years ago by WouterDeCoster ♦ 45k
4
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1
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4.4k
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1
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Polishing Reads long or Short
polishing ngs short reads long reads polish written 4.1 years ago by midox • 260 • updated 4.1 years ago by Medhat ♦ 8.9k
4
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3
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2.6k
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3
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PacBio Technology Assemblers
assembly long reads pacbio written 6.4 years ago by midox • 260 • updated 4.2 years ago by Picasa • 590
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