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3
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1
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121
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1
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Scaffolding a genome with long reads.
assembly long reads pacbio written 29 days ago by Picasa • 470 • updated 29 days ago by lieven.sterck ♦ 6.2k
2
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1
answer
163
views
1
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.bam format is not enough for mapped long reads
file formats alignment long reads written 9 weeks ago by anastasiia.satyr • 20 • updated 5 weeks ago by Biostar ♦♦ 20
8
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0
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590
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5 follow
0
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Tutorial: Using the MinION MinKNOW software on Ubuntu 1604
tutorial minion long reads oxford nanopore written 4 months ago by colindaven • 1.8k
0
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0
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248
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0
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Direct cDNA nanopore strandness discover - 2D approach
direct cdna long reads nanopore strand written 5 months ago by ruisergioluis • 20
1
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0
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511
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0
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Job: Postdocs/Scientists: Long Reads, Epigenomes and Human Diseases
epigenomics chip-seq long reads rna-seq job written 6 months ago by fanggang • 80
5
votes
1
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590
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1
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QC of Oxford Nanopore fastq files with NanoPlot
long reads tool oxford nanopore written 5 months ago by s.m.frampton • 10 • updated 5 months ago by WouterDeCoster ♦ 42k
2
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1
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554
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1
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Binning Tools for Long Reads/Contigs
long reads metagenomics contigs binning written 8 months ago by vijinim • 100
8
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0
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536
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5 follow
0
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Using Bandage to finish ambiguous long-read assembly?
unicycler assembly long reads bandage written 10 months ago by predeus • 1.2k • updated 9 months ago by Biostar ♦♦ 20
2
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1
answer
539
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1
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Transcript assembly with nanopore long reads
assembly long reads transcriptome written 10 months ago by caggtaagtat • 860 • updated 10 months ago by colindaven • 1.8k
2
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0
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847
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0
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Job: Postdoc & Scientist (New York City): Microbiome and Human Diseases
microbiome metagenomics metagenome long reads job written 14 months ago by fanggang • 80
0
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0
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365
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0
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Possible to call variants from PacBio reads from a mixed sample?
long reads pacbio snp written 13 months ago by nchuang • 200
1
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1
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1.4k
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1
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Raw Data from Oxford Nanopore Sequencing Technology
naopore ngs minion long reads rawdata written 17 months ago by midox • 230 • updated 17 months ago by h.mon ♦ 28k
13
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0
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2.7k
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7 follow
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Tool: NanoPack: Scripts for long read sequencing data processing and analysis: NanoPlot, NanoFilt, NanoStat, NanoLyse, NanoComp
long reads tool pacbio oxford nanopore written 2.1 years ago by WouterDeCoster ♦ 42k
6
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0
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1.5k
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5 follow
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RNA-seq long reads vs. transcripts
assembly long reads rna-seq written 21 months ago by tunl • 60
4
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0
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688
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0
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Length distribution of PacBio RNA-seq
long reads rna-seq pacbio written 2.2 years ago by tunl • 60
5
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1
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829
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1
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Question about downloading RNA-seq long reads and short reads for the same sample
long reads rna-seq pacbio written 2.2 years ago by tunl • 60 • updated 2.2 years ago by magdoll • 20
0
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1
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609
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1
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Using long reads to find a combination of mutations
long reads nanopore snp variants written 2.3 years ago by eayasi • 0 • updated 2.3 years ago by colindaven • 1.8k
3
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1.3k
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0
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Use kallisto with ONT (nanopore) cDNA long reads
long reads kallisto nanopore written 2.3 years ago by Nicolas Rosewick ♦ 8.3k
11
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1
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1.9k
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9 follow
1
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Oxford Nanopore BWA MEM alignments
long reads bwa mem bwa oxford nanopore written 2.5 years ago by QVINTVS_FABIVS_MAXIMVS • 2.3k • updated 2.5 years ago by WouterDeCoster ♦ 42k
4
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1
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3.2k
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1
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Polishing Reads long or Short
polishing ngs short reads long reads polish written 2.8 years ago by midox • 230 • updated 2.8 years ago by Medhat ♦ 8.5k
3
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3
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2.3k
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3
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PacBio Technology Assemblers
assembly long reads pacbio written 5.1 years ago by midox • 230 • updated 2.9 years ago by Picasa • 470
8
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4
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9.1k
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6 follow
4
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Pacbio: extract fastq from h5 file based on quality filtering
assembly hgap long reads celera pacbio written 4.8 years ago by merodev • 140 • updated 3.0 years ago by mehmetgoktay1989 • 0
2
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1
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2.0k
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1
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Read length distribution of PacBio
reads ngs long reads pacbio sequencing written 3.2 years ago by midox • 230 • updated 3.2 years ago by Antonio R. Franco • 4.2k
0
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1
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1.2k
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1
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download PacBio long reads for E.coli
ngs sequencing long reads pacbio download written 3.2 years ago by midox • 230 • updated 3.2 years ago by Medhat ♦ 8.5k
0
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1
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1.4k
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1
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Align long nanopore minion cDNA reads
alignment long reads nanopore written 4.3 years ago by Nicolas Rosewick ♦ 8.3k • updated 4.2 years ago by mark.ziemann • 1.2k
2
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1
answer
2.0k
views
1
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HGAP assembly algorithm(help)
assembly long reads algorithms written 4.8 years ago by midox • 230
0
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2
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1.1k
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2
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genome assemlers specifications
assembly next-gen long reads short reads written 5.3 years ago by midox • 230 • updated 5.3 years ago by st.ph.n • 2.5k
5
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4
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2.7k
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4
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Long reads Assembly Algorithms
reads assembly long reads assembly algorithms written 5.5 years ago by midox • 230
4
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2
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3.8k
views
2
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short and long reads
reads assembly short reads long reads written 5.5 years ago by midox • 230 • updated 5.5 years ago by JC ♦ 9.1k
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