Showing: macs2reset
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4
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299
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5 follow
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Can be merged biological replicates?
chip-seq macs2 peak-calling atac-seq rna-seq written 8 weeks ago by star60 • updated 23 days ago by ZZzzzzhong110
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When using MACS2 with -f BAM, it is possible to have a shift other than 0?
macs macs2 written 7 weeks ago by Lucy0 • updated 24 days ago by Biostar ♦♦ 20
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133
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1
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Determine peak summits after IDR analysis
peak summits macs2 idr written 5 weeks ago by Lucy0 • updated 5 weeks ago by Alex Reynolds26k
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158
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3
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166
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237
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1
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0
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137
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Meaning of mfold upper limit?
mfold macs2 chip-seq written 10 weeks ago by mbk0asis380
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1
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545
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file "_peaks.bed" on macs2
macs2 chip-seq peakcall written 16 months ago by Brice22230 • updated 3 months ago by Biostar ♦♦ 20
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2
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430
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5 follow
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How can I look at find 'open chromatin' from ATAC-seq data using MACS2
macs2 atac-seq written 3 months ago by a.rex150 • updated 3 months ago by ATpoint8.0k
1
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187
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3
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7 follow
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ATAC-seq: differential peaks using macs2 bdgdiff yields strange results
macs2 atac-seq written 8 months ago by stephenz10 • updated 3 months ago by Alternative220
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4
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Empty output from MACS2 when using control
peak calling macs2 chip-seq written 2.7 years ago by lm68750 • updated 3 months ago by oriolebaltimore60
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1
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244
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1
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Doubt using HOMER annotatePeaks.pl
homer macs2 chip-seq written 4 months ago by nanoide10 • updated 4 months ago by b.nota5.0k
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526
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8 follow
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Peak calling using macs2?
macs2 chip-seq peaks peak-calling written 4 months ago by star60 • updated 4 months ago by RamRS18k
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5 follow
3
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MACS2 with multiple replicates
macs2 chip-seq written 18 months ago by ariel.balter130 • updated 4 months ago by Hmd10
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3
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462
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3
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MACS2 output (fold enrichment)
macs chipseq macs2 written 4 months ago by samantha_jeschonek50 • updated 4 months ago by roma110
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198
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0
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1
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Peak calling with MACS for paired end DNase-seq data
macs2 paired-end dna-seq bwa written 5 months ago by Bioinformatist Newbie230 • updated 5 months ago by igor6.8k
1
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413
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Problem with MACS2 results
ngs macs2 written 5 months ago by eilluecaf0 • updated 5 months ago by Chris Fields1.9k
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642
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1
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Difference in number of peaks called
macs2 chip-seq peakcalling written 16 months ago by anu014150 • updated 6 months ago by colindaven800
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3
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0
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364
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using MACS2 with hg38
macs2 hg38 written 7 months ago by varsha61970 • updated 7 months ago by igor6.8k
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290
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