Showing: macs2reset
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Narrow & Broad peaks from 'macs2 bdgdiff'
macs2 next-gen chip-seq peakcalling sequencing written 17 months ago by anu014160 • updated 16 days ago by MMa250
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133
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Duplicated ATAC-Seq peaks called by MACS2
macs peak calling macs2 atac-seq written 19 days ago by Gary450 • updated 18 days ago by geek_y9.1k
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158
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ChIP-Seq Analysis allele specific way?
vcf chip-seq ngs macs2 ase written 27 days ago by Susmita Mandal20 • updated 26 days ago by Devon Ryan88k
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225
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Problem with MACS2 results
ngs macs2 written 9 months ago by eilluecaf0 • updated 3 months ago by Biostar ♦♦ 20
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Macs2: predicted fragment length less than 2*tag length
macs2 chip-seq tagsize written 5 months ago by langya30 • updated 3 months ago by Biostar ♦♦ 20
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341
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7 follow
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macs2 conda installation problem
software error osx macs2 python version written 3 months ago by jcs920 • updated 3 months ago by h.mon23k
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Crazy log-likelihood values from MACS2 `bdgdiff`.
chipseq macs2 differential binding analysis written 22 months ago by ariel.balter130 • updated 3 months ago by yinyeya0
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5 follow
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Can be merged biological replicates?
chip-seq macs2 peak-calling atac-seq rna-seq written 5 months ago by star110 • updated 4 months ago by ZZzzzzhong190
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225
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When using MACS2 with -f BAM, it is possible to have a shift other than 0?
macs macs2 written 5 months ago by Lucy0 • updated 4 months ago by Biostar ♦♦ 20
1
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278
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Determine peak summits after IDR analysis
peak summits macs2 idr written 5 months ago by Lucy0 • updated 5 months ago by Alex Reynolds27k
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0
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358
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0
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204
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Meaning of mfold upper limit?
mfold macs2 chip-seq written 6 months ago by mbk0asis410
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633
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file "_peaks.bed" on macs2
macs2 chip-seq peakcall written 20 months ago by Brice22230 • updated 7 months ago by Biostar ♦♦ 20
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5 follow
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How can I look at find 'open chromatin' from ATAC-seq data using MACS2
macs2 atac-seq written 7 months ago by a.rex170 • updated 7 months ago by ATpoint13k
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ATAC-seq: differential peaks using macs2 bdgdiff yields strange results
macs2 atac-seq written 12 months ago by stephenz10 • updated 7 months ago by Alternative220
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Empty output from MACS2 when using control
peak calling macs2 chip-seq written 3.1 years ago by lm68750 • updated 7 months ago by oriolebaltimore60
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Doubt using HOMER annotatePeaks.pl
homer macs2 chip-seq written 8 months ago by nanoide10 • updated 8 months ago by b.nota6.0k
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Peak calling using macs2?
macs2 chip-seq peaks peak-calling written 8 months ago by star110 • updated 8 months ago by RamRS20k
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5 follow
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MACS2 with multiple replicates
macs2 chip-seq written 22 months ago by ariel.balter130 • updated 8 months ago by Hmd10
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MACS2 output (fold enrichment)
macs chipseq macs2 written 8 months ago by samantha_jeschonek50 • updated 8 months ago by roma120
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