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<prev • 173 results • page 1 of 6 • next >
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GWAS dataset calculating MAF for European dataset
maf gwas written 9 days ago by victoria_mulcahy • 10
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0
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90
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VCF to maf
vcf maf conversion written 11 days ago by fabbri.marco • 0
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0
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63
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0
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MAF comparison Fisher exact test
maf snp written 12 days ago by vishweshwaransridhar • 10 • updated 12 days ago by zx8754 ♦ 9.1k
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0
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125
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0
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Calculate minor allele frequencies with effect allele frequencies in GWAS
maf gwas snp written 23 days ago by rk • 10 • updated 23 days ago by zx8754 ♦ 9.1k
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2
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117
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5 follow
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Get the Minor Allele Frequency for Specific Populations from NCBI dbSNP
ncbi maf dbsnp snp written 5 weeks ago by andy.wang • 40
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56
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1
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Difference between allele1 vs. allele2 in TCGA MAF files?
maf tcga tumor genotype genomics written 5 weeks ago by jiaqiwu • 0 • updated 5 weeks ago by Kevin Blighe ♦ 56k
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1
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50
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1
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How do I convert dbSNP JSON output MAF frequencies to floats?
maf json dbsnp written 5 weeks ago by domsooch • 0
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1
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121
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1
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Effect Allele Frequency in base summary statistics for PRSs calculation
polygenic risk scores gwas prs maf prsice written 7 weeks ago by bigfoot • 0 • updated 7 weeks ago by Sam • 2.6k
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1
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172
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1
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Effect Allele Frequency (EAF) to Minor Allele Frequency (MAF)
maf gwas genome-wide genetics genomics written 7 weeks ago by bigfoot • 0 • updated 7 weeks ago by Kevin Blighe ♦ 56k
1
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1
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116
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1
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Pan-cancer dataset of GENIE control data download and sharing
maf fusion genie cnv cancer written 3 months ago by Shicheng Guo • 8.1k • updated 3 months ago by ATpoint ♦ 32k
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133
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how to do gene mutation multivariate survival analysis?
maf coxph mutation written 3 months ago by jnmcluo • 0
3
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1.6k
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0
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Aggregate multiple VCFs into a single MAF or generate a multi-sample MAF from a multi-sample VCF
maf file-formats conversion sequencing written 2.8 years ago by Luca Beltrame • 220 • updated 5 months ago by d33jch • 0
2
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176
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0
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Comparing calls from different VCFs
vcf maf written 6 months ago by vctrm67 • 10
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262
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How does genenomestudio's genotyping module calculate minor allele frequency (Minor Freq)?
maf gwas snp genomestudio written 6 months ago by curious • 250 • updated 6 months ago by Biostar ♦♦ 20
1
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2
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1.9k
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2
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Extract alignment blocks of a given region from MAF file having whole genome alignments
maf ensembl whole genome alignment ucsc written 2.6 years ago by urjaswita • 90 • updated 7 months ago by Zhenpeng Yu • 0
42
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4
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13 follow
4
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Can You Please Tell Me Where I Find Information About .Fai File Format?
maf gatk written 9.8 years ago by Biomed ♦ 4.6k • updated 8 months ago by John Marshall ♦ 1.9k
3
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463
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Interpretation of Polygenic Risk Score
maf polygenic risk score snp written 8 months ago by Lb • 40
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1
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237
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1
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How to efficiently get reference bases (hg19) for a list of SNV loci (e.g., from a MAF file)?
maf snv written 8 months ago by mrz132435 • 20 • updated 8 months ago by manuel.belmadani • 1.2k
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214
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0
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How to retrieve only blocks that contain sequences for ALL species from a maf file?
maf python mutation annotation format written 9 months ago by anniejeanforster • 0
3
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484
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0
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Converting MAF to Fasta
fasta maf alignment mugsy written 9 months ago by little_more • 20
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1.4k
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0
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How To Stitch Maf Blocks
maf written 6.3 years ago by biorepine • 1.4k • updated 9 months ago by Biostar ♦♦ 20
2
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1
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287
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1
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TCGA: Discrepancy in mutation records numbers based on data acquistion method?
maf R tcga mutation written 10 months ago by sc • 10 • updated 10 months ago by Kevin Blighe ♦ 56k
0
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1
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359
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1
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How to calculate base substitution mutation frequency (C>T T>A C>G T>C T>G C>A) from TCGA MAF files
maf tcga snp written 10 months ago by Mike • 1.5k • updated 10 months ago by Martina • 20
0
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0
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299
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0
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View MAF file and the reference sequence in a genome viewer/annotator along with SAM/BAM?
maf viewer bam sam written 11 months ago by DanielC • 120
6
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1
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831
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1
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Problem with vcf2maf
maf vcf path wgs written 11 months ago by A • 3.7k • updated 11 months ago by RamRS ♦ 26k
1
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1
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531
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1
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how to use existed database to filter snps in vcf with MAF
maf written 11 months ago by jiangpeng59 • 10 • updated 11 months ago by jared.andrews07 ♦ 5.3k
1
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2
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691
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2
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Problem with .vcf annovar
vcf annovar maf written 11 months ago by A • 3.7k • updated 11 months ago by onemoreuser • 20
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271
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0
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In MAF files, does c_position is equivalent to cDNA_positions?
maf genome cdna gdc written 12 months ago by mariamcurbelo2061 • 0
0
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1
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600
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1
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bcftools / samtools, which database does the MAF function use?
maf bcftools samtools written 12 months ago by Davide Chicco • 110 • updated 12 months ago by Pierre Lindenbaum ♦ 127k
1
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1
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279
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1
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query and export SNPs information from ensembl
maf ensembl snps written 12 months ago by landivincenzo • 0 • updated 12 months ago by Ben_Ensembl • 1.3k
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