Latest
Open
RNA-Seq
ChIP-Seq
SNP
Assembly
Tutorials
Tools
Jobs
Forum
Planet
All »
Home
Log In
Showing selected topics • reset
or   Classic search
<prev • 181 results • page 1 of 7 • next >
0
votes
0
answers
36
views
0
answers
weird to see top gene mutation frequency on my dashboard (plotmafSummary(maf))
maf R written 10 hours ago by gaom001 • 0
4
votes
0
answers
50
views
0
answers
How to interpret variant allele frequency?
maf vaf written 19 hours ago by SunRise2019 • 0
5
votes
1
answer
49
views
1
answer
viewing MAF files as dataframe of size over 2GB
maf R python annotations gatk written 1 day ago by noon • 0
0
votes
0
answers
82
views
0
answers
Aggregation and analysis of MAF files
maf R genomics cancer written 6 weeks ago by weisekyle • 0
0
votes
0
answers
102
views
0
answers
Error while running vcf2maf tool
variant-calling maf vep vcf2maf vcfs written 9 weeks ago by Jordan • 1.1k
0
votes
0
answers
216
views
0
answers
how to do gene mutation multivariate survival analysis?
maf coxph mutation written 7 months ago by jnmcluo • 0 • updated 9 weeks ago by Biostar ♦♦ 20
1
vote
2
answers
142
views
2
answers
Conversion of Vep.vcf to MAF format?
maf genome vep snp cancer written 11 weeks ago by Thind Amarinder • 30
0
votes
1
answer
119
views
1
answer
Understanding TCGA somatic mutation files
vcf tcga snps maf written 3 months ago by j.lunger18 • 10 • updated 3 months ago by Kevin Blighe ♦ 63k
0
votes
1
answer
917
views
1
answer
UCSC MAF format left or right align gaps?
genome maf ucsc written 3.3 years ago by jxmavs • 0 • updated 3 months ago by Kevin Blighe ♦ 63k
1
vote
4
answers
3.3k
views
4
answers
Issue converting VCF to MAF using snpEff annotations
maf vcf snpeff vcf2maf written 5.5 years ago by Marina Manrique • 1.3k • updated 3 months ago by tsy19900929 • 0
1
vote
2
answers
189
views
2
answers
vcf2maf VEP annotated VCF conversion
vcf maf ngs vcf2maf wgs written 3 months ago by Martina • 30
1
vote
1
answer
122
views
1
answer
GWAS dataset calculating MAF for European dataset
maf gwas written 4 months ago by victoria_mulcahy • 10
0
votes
0
answers
213
views
0
answers
VCF to maf
vcf maf conversion written 4 months ago by fabbri.marco • 0
0
votes
0
answers
151
views
0
answers
MAF comparison Fisher exact test
maf snp written 4 months ago by vishweshwaransridhar • 10 • updated 4 months ago by zx8754 ♦ 9.4k
1
vote
0
answers
260
views
0
answers
Calculate minor allele frequencies with effect allele frequencies in GWAS
maf gwas snp written 4 months ago by rk • 10 • updated 4 months ago by zx8754 ♦ 9.4k
6
votes
2
answers
256
views
5 follow
2
answers
Get the Minor Allele Frequency for Specific Populations from NCBI dbSNP
ncbi maf dbsnp snp written 5 months ago by andy.wang • 40
0
votes
1
answer
157
views
1
answer
Difference between allele1 vs. allele2 in TCGA MAF files?
maf tcga tumor genotype genomics written 5 months ago by jiaqiwu • 0 • updated 5 months ago by Kevin Blighe ♦ 63k
0
votes
1
answer
127
views
1
answer
How do I convert dbSNP JSON output MAF frequencies to floats?
maf json dbsnp written 5 months ago by domsooch • 0
0
votes
1
answer
288
views
1
answer
Effect Allele Frequency in base summary statistics for PRSs calculation
polygenic risk scores gwas prs maf prsice written 5 months ago by bigfoot • 0 • updated 5 months ago by Sam • 3.0k
0
votes
1
answer
491
views
1
answer
Effect Allele Frequency (EAF) to Minor Allele Frequency (MAF)
maf gwas genome-wide genetics genomics written 5 months ago by bigfoot • 0 • updated 5 months ago by Kevin Blighe ♦ 63k
1
vote
1
answer
194
views
1
answer
Pan-cancer dataset of GENIE control data download and sharing
maf fusion genie cnv cancer written 7 months ago by Shicheng Guo • 8.3k • updated 7 months ago by ATpoint ♦ 36k
3
votes
0
answers
1.8k
views
0
answers
Aggregate multiple VCFs into a single MAF or generate a multi-sample MAF from a multi-sample VCF
maf file-formats conversion sequencing written 3.1 years ago by Luca Beltrame • 220 • updated 9 months ago by d33jch • 0
2
votes
0
answers
245
views
0
answers
Comparing calls from different VCFs
vcf maf written 10 months ago by vctrm67 • 10
0
votes
0
answers
328
views
0
answers
How does genenomestudio's genotyping module calculate minor allele frequency (Minor Freq)?
maf gwas snp genomestudio written 10 months ago by curious • 340 • updated 10 months ago by Biostar ♦♦ 20
1
vote
2
answers
2.1k
views
2
answers
Extract alignment blocks of a given region from MAF file having whole genome alignments
maf ensembl whole genome alignment ucsc written 2.9 years ago by urjaswita • 90 • updated 11 months ago by Zhenpeng Yu • 0
42
votes
4
answers
21k
views
13 follow
4
answers
Can You Please Tell Me Where I Find Information About .Fai File Format?
maf gatk written 10.1 years ago by Biomed ♦ 4.7k • updated 12 months ago by John Marshall ♦ 2.0k
3
votes
0
answers
668
views
0
answers
Interpretation of Polygenic Risk Score
maf polygenic risk score snp written 12 months ago by Lb • 40
0
votes
1
answer
306
views
1
answer
How to efficiently get reference bases (hg19) for a list of SNV loci (e.g., from a MAF file)?
maf snv written 12 months ago by mrz132435 • 20 • updated 12 months ago by manuel.belmadani • 1.2k
0
votes
0
answers
266
views
0
answers
How to retrieve only blocks that contain sequences for ALL species from a maf file?
maf python mutation annotation format written 13 months ago by anniejeanforster • 0
3
votes
0
answers
756
views
0
answers
Converting MAF to Fasta
fasta maf alignment mugsy written 13 months ago by little_more • 30
<prev • 181 results • page 1 of 7 • next >
Recent Votes
Recent Locations • All »
  • INDIA, 1 minute ago
  • United States, 2 minutes ago
  • Germany, 3 minutes ago
Recent Awards • All »
Recent Replies
Content
Help
Access
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.3.0
Traffic: 721 users visited in the last hour