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<prev • 114 results • page 1 of 4 • next >
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ABSOLUTE MAF error
maf absolute written 25 days ago by Alejandro Jimenez Sanchez • 90
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159
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Copy number variation and its impact on allele frequency
maf cnv alle written 4 weeks ago by MAPK • 990
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152
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Aggregate multiple VCFs into a single MAF or generate a multi-sample MAF from a multi-sample VCF
maf file-formats conversion sequencing written 9 weeks ago by Luca Beltrame • 170
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263
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Error when running Genome MuSiC: no smg genes
maf software error music genome music smg written 5 months ago by C Wang • 0 • updated 9 weeks ago by Chris Miller ♦ 18k
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161
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5 follow
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Installing ensembl 86 VEP and vcf2maf and getting SNP MAFs
maf 1000genomes ensemble vep vcf2maf written 10 weeks ago by eurioste • 20
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129
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Getting 1000 Genomes phase one MAF values
maf 1000 genomes written 10 weeks ago by eurioste • 20
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158
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From COSMIC mutations to MAF files
maf cosmic driver gene mutsigcv written 3 months ago by fernandov • 0
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126
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Resources for finding out the allele frequency of a SNV by subpopulation
maf allele frequency subpopulation snp written 3 months ago by Vincent Laufer • 870
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197
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MAF to Fasta or XMFA - how does it work?
maf fasta xmfa mugsy written 3 months ago by jrj.healey • 2.0k
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133
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UCSC MAF format left or right align gaps?
genome maf ucsc written 3 months ago by jxmavs • 0
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245
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Mutation processing by cbioportal
cbioportab maf tcga gdc written 3 months ago by Arnaud Ceol • 750 • updated 3 months ago by igor • 4.4k
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Confusion regarding selection of TCGA maf files for analysis
maf tcga dashboard data matrix written 2.5 years ago by monukmr98 • 60 • updated 4 months ago by Biostar ♦♦ 20
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190
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Comparing MAF of multiple SNP against several populations using chi-squared analysis
maf populations plink chi-squared analysis written 4 months ago by maroua.boujemaa • 0
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5
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18 follow
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Getting Allele Frequencies From 1000 Genomes
genome hapmap ucsc maf ensembl written 6.4 years ago by Stephen ♦ 2.6k • updated 5 months ago by Isaac Joseph • 60
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201
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Calculating minor allele concordance
maf array exome impute concordance written 5 months ago by Vivek • 1.9k
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4.2k
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3
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MAF (minor allele frequency) calculation for finding rare variants from TCGA
maf rare variant tcga snp written 2.9 years ago by imagineyd • 60 • updated 6 months ago by aliexs618 • 0
113
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6
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75 follow
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Tutorial: Working with MAF files (Mutation Annotation Format) from the TCGA (The Cancer Genome Atlas)
cancer tutorial tcga maf music mutation written 4.4 years ago by Cyriac Kandoth ♦ 4.6k
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1.5k
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CNV frequencies and MAF
maf xhmm cnv written 2.8 years ago by Leandro Lima • 830 • updated 6 months ago by smarini1 • 0
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265
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How to identify read depth from maf files?
maf read sequencing depth written 6 months ago by omd • 10
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2
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XMFA to MAF
maf alignment xmfa written 7 months ago by Lynda Ait-Zai • 20
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tools to calculate Exac population specific frequency
maf exac sequencing written 7 months ago by jan • 60
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1
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500
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Converting Vcf File To Maf
vcf maf non-coding written 7 months ago by anshupa.vssut • 20 • updated 7 months ago by mbyvcm • 290
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4
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4.3k
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Variant allele frequency in TCGA and ICGC
genome vcf icgc tcga maf written 22 months ago by Maarten Slagter • 50 • updated 8 months ago by Biostar ♦♦ 20
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404
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Generating Multiple Alignment Format file (Maf)
maf multiple alignmnet written 8 months ago by roz_safavi • 0
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273
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Obtaining a list of SNPs that do not vary in different populations
maf hapmap plink written 9 months ago by HumeMarx • 20
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27 follow
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Tutorial: Annotating TCGA MAFs with the latest Ensembl/Gencode transcripts
vcf somatic tutorial tcga maf ensembl written 3.6 years ago by Cyriac Kandoth ♦ 4.6k
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245
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Music SMG test for non coding regions
maf music roi non-coding written 9 months ago by anshupa.vssut • 20 • updated 9 months ago by WouterDeCoster ♦ 20k
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277
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Using Stitch MAF blocks withou Galaxy
maf stitch galaxy written 9 months ago by elsoja • 0
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516
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Minor Allele Frequency in PLINK
array maf quality control plink filtering written 10 months ago by F.R. • 30
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Should variant phasing be performed before or after filtering by Minor Allele Frequency?
maf gwas phasing beagle written 12 months ago by i.wilson • 10 • updated 10 months ago by Biostar ♦♦ 20
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