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How to solve the different number of hits from tblastn when I use the option -parse_seqids in makeblastdb command?
makeblastdb tblastn blast written 2 days ago by carina2817 • 0
2
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1
answer
447
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7 follow
1
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Issue with version of makeblastdb during Prokka installation
makeblastdb prokka written 11 weeks ago by dongyun.jung • 0 • updated 4 weeks ago by pehenriquejp • 0
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2
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7 follow
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Missing or disappearing output RepeatMasker
makeblastdb repeatmasker written 5.3 years ago by mtollis • 30 • updated 5 months ago by gbdias • 80
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Repeatmasker Crashes Before End Of Run With "Can'T Fork..."
makeblastdb repeats alignment repeatmasker blast written 7.8 years ago by User 9996 • 800 • updated 5 months ago by Biostar ♦♦ 20
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3
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BLAST Database error: No alias or index file found for nucleotide database
makeblastdb sift blast blastn written 4.9 years ago by arronslacey • 260 • updated 5 months ago by RamRS ♦ 24k
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Error with makeblastdb from UniProt fasta file: no sequences were found
makeblastdb fasta uniprot blast error written 6 months ago by mafernandez • 0
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1.6k
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Blast+ db problem
standalone makeblastdb blast written 3.6 years ago by Xylanaser • 20 • updated 12 months ago by RamRS ♦ 24k
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2
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2.7k
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2
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Creating A Dna Sequence Database Locally For Blastplus
makeblastdb blast written 9.2 years ago by Eric Normandeau ♦ 10k • updated 12 months ago by RamRS ♦ 24k
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1
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483
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1
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Removing duplicate protein sequences from fasta file
makeblastdb database blast written 13 months ago by saadleeshehreen • 70 • updated 13 months ago by finswimmer ♦ 12k
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1
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659
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1
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How to format nr database for blastp?
makeblastdb blastp written 14 months ago by MAPK • 1.4k • updated 14 months ago by h.mon ♦ 27k
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463
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Masking and Parsing problem in Standalone BLAST 2.7.1?
makeblastdb masking blastdbcmd ncbi blast parsing written 14 months ago by kabir.deb0353 • 0
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how to makeblastdb with taxon id's
makeblastdb blast written 23 months ago by gb • 900 • updated 15 months ago by Biostar ♦♦ 20
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blastn errors following building of database
makeblastdb blast blastn written 17 months ago by rbronste • 260 • updated 16 months ago by Biostar ♦♦ 20
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2
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845
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2
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differences between "-title database_title" and "-out database_name" for "makeblastdb" of Blast
makeblastdb blast written 2.1 years ago by qwzhang0601 • 60 • updated 2.1 years ago by h.mon ♦ 27k
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2
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1.2k
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5 follow
2
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Blastn error, database creation problem, BLAST
makeblastdb database blast blastn written 2.1 years ago by cristian • 230 • updated 2.1 years ago by h.mon ♦ 27k
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3
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7.2k
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3
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Blast 2.2.31+ "makeblastdb": where are my databases?
makeblastdb blast written 4.2 years ago by kjojess • 0 • updated 2.2 years ago by Nanu • 0
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5 follow
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makeblastdb doesn't create database output
makeblastdb fasta blast blast+ ncbi written 2.4 years ago by m.rhodes • 20 • updated 2.4 years ago by genomax ♦ 71k
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makeblastdb error: Error: (803.7) [makeblastdb] Blast-def-line-set.E.seqid.E.local.str Bad char [0xC3] in string at byte 45
makeblastdb ncbi blast written 2.4 years ago by m.rhodes • 20 • updated 2.4 years ago by genomax ♦ 71k
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1.1k
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local blast: makeblastdb: Abort trap 6
fasta makeblastdb blast written 2.4 years ago by rororo • 0
20
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6
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6.1k
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12 follow
6
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Error Invoking Makeblastdb
makeblastdb error repeatmasker written 8.3 years ago by Naveen • 50 • updated 2.8 years ago by linda • 0
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3
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3.1k
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3
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How to make a custom blast db with taxon IDs from a taxid_map file
makeblastdb taxid_map blast written 3.2 years ago by rwn • 480 • updated 2.8 years ago by xzhan018 • 30
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4
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3.2k
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4
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How to makeblastdb Uniprot's Taxonomic Divisions?
makeblastdb taxonomy uniprot blast written 4.1 years ago by Eliad • 50 • updated 3.1 years ago by mjp • 10
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1
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2.2k
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1
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BLAST options error (input format type error) in makeblastdb
makeblastdb blast options error input format type written 3.2 years ago by 2013302630028 • 10 • updated 3.2 years ago by Sej Modha ♦ 4.4k
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1
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6.5k
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1
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formatting makeblastdb commands
makeblastdb ncbi database blast written 3.2 years ago by cllezark • 20
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4
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11k
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12 follow
4
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How To Make A Blast Database With Taxonids From Ncbi Query.
makeblastdb metagenomics taxonomy blast written 7.8 years ago by Michael Dondrup ♦ 46k • updated 3.5 years ago by 5heikki ♦ 8.5k
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1.2k
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makeblastdb; it says 'Adding sequences from FASTA; added 27200239 sequences in 55053 seconds.'
makeblastdb written 3.8 years ago by junghyunjulie • 0 • updated 3.8 years ago by SES ♦ 8.2k
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2
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4.8k
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2
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Ncbi Blast+ Taxid And Taxid_Map
ncbi makeblastdb taxonomy blast fasta written 9.0 years ago by Jelle • 50 • updated 4.0 years ago by Joseph Hughes • 2.7k
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2
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5.1k
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2
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Strange "Error: OID not found" in NCBI's blastdbcmd
fasta blastcmd blast makeblastdb blastdbcmd written 4.8 years ago by juanma_lace • 20 • updated 4.8 years ago by Siva • 1.6k
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4.5k
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makeblastdb problem for bacterial genomes
makeblastdb blast written 4.9 years ago by niu2rseq • 70 • updated 4.9 years ago by RamRS ♦ 24k
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3
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2.4k
views
3
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Blast Db Version
makeblastdb blast written 7.9 years ago by Brandon Wilson • 0 • updated 4.9 years ago by Wan Fahmi • 0
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