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<prev • 29 results • page 1 of 1 • next >
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MAKER annotation pipeline output
genome annotation maker written 25 days ago by msobol • 0
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537
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Option -categorize in SNAP gene prediction.
annotation snap maker written 19 months ago by Picasa • 350 • updated 7 weeks ago by janneke.aylward • 0
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125
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Gene loss in subsequent round of maker for fungal genome annotation
annotation genome assembly maker written 10 weeks ago by urmi208 • 30
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223
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LTR-Harvest false positives (Maker repeat library construction)
annotation ltr-harvest maker written 5 months ago by timo.metz • 0
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428
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Maker failure on almost all contig
software error annotation maker written 6 months ago by Roxane Boyer • 530
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674
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MAKER annotation post processing (AED score)
aed maker written 10 months ago by Picasa • 350 • updated 8 months ago by dfajar2 • 20
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518
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MAKER AED score
annotation evm aed-score rna-seq maker written 9 months ago by John Eightecho • 0
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510
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RepeatMasker in Maker
repeatmasker maker written 11 months ago by s.kyungyong64 • 10 • updated 11 months ago by Philipp Bayer ♦ 5.4k
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337
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what edits to make on maker_opts to predict complete genes using MAKER
maker_opts gene prediction complete genes maker written 11 months ago by ngs_new_user • 0 • updated 11 months ago by Philipp Bayer ♦ 5.4k
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Using RNA seq for genome annotation
annotation maker written 12 months ago by Picasa • 350 • updated 12 months ago by Ben • 50
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Descrease annotation running time by spliting contigs into separated files (maker)
genome annotation maker written 13 months ago by Roxane Boyer • 530
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430
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maker with augusuts / utr=off
genome_annotation maker annotation written 14 months ago by Nastasiia • 10
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958
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MAKER annotation gives weird results
gene annotation maker written 19 months ago by int11ap1 • 310
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Training Augustus for Maker
augustus annotation maker written 21 months ago by Roxane Boyer • 530 • updated 20 months ago by Juke-34 • 1.2k
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MAKER command maker2zff .ann and .dna files are empty
genome software error next-gen maker sequencing written 21 months ago by mks002 • 100
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First time using maker
genome annotation maker written 22 months ago by Roxane Boyer • 530
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852
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Maker Annotation: How to put multiple HMM mod file in maker_opts.ctl?
annotation prediction hmm genemark maker written 22 months ago by allyson1115ar • 20
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599
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When running maker, how is the *.index files in fold mpi_blastdb/ generated?
gene annotation maker written 23 months ago by gerrychang1985 • 30
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764
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Problems when training maker-p
annotation training maker written 2.2 years ago by gerrychang1985 • 30 • updated 24 months ago by Biostar ♦♦ 20
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701
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Warning in Genemark and maker
software error genemark maker written 2.0 years ago by qazwsx88tt • 0
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580
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Best way to determine gene positions in a related strain, from a well annotated reference? (and plus some RNAseq?)
anotation maker written 2.0 years ago by Daniel • 3.6k • updated 2.0 years ago by shaun • 80
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Status of maker annotation
genome annotation maker written 2.0 years ago by Prakki Rama • 2.1k • updated 2.0 years ago by Juke-34 • 1.2k
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Problem in installing Maker
annotation repeatmasker maker written 2.1 years ago by allyson1115ar • 20
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892
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Maker Output: transcript names
genome annotation maker written 2.2 years ago by mmacd • 20
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1.4k
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Maker output - Easy way to find actual gene names?
genome gene-prediction output maker written 2.5 years ago by voidnyx • 10 • updated 2.5 years ago by dandence • 0
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1.7k
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Maker produces duplicate mRNA sequence with different AED score, what is up with that?
duplicate maker proteins maker-p written 3.4 years ago by Lesley Sitter • 440
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How does MAKER decide which proteins go into the final output?
annotation maker written 2.9 years ago by Philipp Bayer ♦ 5.4k • updated 2.9 years ago by Lesley Sitter • 440
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1.4k
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PacBio transcriptome and gene annotation
genes maker pacbio transcriptome written 3.3 years ago by Alex • 1.4k • updated 3.3 years ago by Biostar ♦♦ 20
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Genemark: Can't exec make_mat.v3.0.ini.csh: No such file or directory
annotation genemark maker written 3.7 years ago by Rob Syme • 530
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