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False positives in manta structural variant calling
sv structural variants wes manta written 3 months ago by Angel • 10
4
votes
1
answer
249
views
1
answer
Preparing files to call by Manta
sv fastq bam manta written 8 months ago by German.M.Demidov • 1.9k
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0
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462
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0
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Are SV tools as thorough in CNV detection as CNVkit?
sv cnvkit parliament manta cnv written 19 months ago by syntax • 60
11
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3
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3.9k
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7 follow
3
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compare SV results across samples - Manta, Delly
wgs manta delly illumina written 2.8 years ago by Richard • 580 • updated 2.8 years ago by d-cameron • 2.3k
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1.1k
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calling SV (or CNV) on CANCER SAMPLES with no GERMLINE
cn.mops manta lumpy delly titancna written 3.2 years ago by Bogdan • 1.1k
6
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1
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1.9k
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1
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filtering structural variants from normal-tumor pairs (whole-genome sequencing)
sv delly manta lumpy filtering written 4.0 years ago by Bogdan • 1.1k • updated 4.0 years ago by d-cameron • 2.3k
2
votes
1
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1.4k
views
1
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Questions about the splitting/spannings reads reported by manta
manta splitting reads spanning reads rna-seq written 4.1 years ago by Jackie • 70 • updated 4.0 years ago by Chris Saunders • 180
3
votes
1
answer
1.0k
views
5 follow
1
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Difference between the two models in manta
manta rna-seq written 4.1 years ago by Jackie • 70 • updated 4.0 years ago by Chris Saunders • 180
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