Showing: mapqreset
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.bam mpileup mapping quality
samtools mapq mpileup sanger fastq written 10 weeks ago by saar.armon0 • updated 9 weeks ago by jkbonfield200
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mpileup mapping quality
samtools mapq written 15 months ago by hpapoli70 • updated 15 months ago by Kevin Blighe51k
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BWA-mem MAPQ Calculation
mq bwa-mem mapping quality mapq alignment written 3.4 years ago by rfriedman2240 • updated 16 months ago by h.mon28k
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difference between mapq=0 and samtools flag 0x900
samtools mapq written 17 months ago by bitpir140 • updated 17 months ago by Devon Ryan92k
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bowtie2 : different MAPQ if -k is set
bowtie2 mapq written 2.1 years ago by Nicolas Rosewick8.4k • updated 2.1 years ago by h.mon28k
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MAPQ filtering for clinical applications
mapq clinical ngs written 2.2 years ago by Kevin Blighe51k • updated 2.2 years ago by d-cameron2.1k
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Mapping Quality of reads with mismatches in STAR
rnaseq star mapq written 2.3 years ago by grant.hovhannisyan1.8k • updated 2.3 years ago by Devon Ryan92k
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Structural Variation Discovery: Delly's Output
sv mapq delly written 2.8 years ago by novice930 • updated 2.4 years ago by trausch1.4k
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Increase the fifth column ( MAPQ) value in Sam file
mapq alignment sam sequencing written 2.4 years ago by madhu.912440 • updated 2.4 years ago by novice930
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Why the file unmapped.bam, from tophat has all reads with mapq =/> 30?
tophat samstat mapq written 4.3 years ago by tiago2112871.1k • updated 4.3 years ago by geek_y10k
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RNA-seq reads mapping to paralogs with high MAPQ. How to ensure this?
bwa mapq rna-seq paralogs written 5.0 years ago by biotech540 • updated 5.0 years ago by Devon Ryan92k
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Is correct finding unique reads with the flag -F 0x104?
flag bowtie2 mapq bwa rna-seq written 5.3 years ago by miquinhap0 • updated 5.3 years ago by David Fredman990
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How to compute MAPQ distribution with Rsamtools
mapq rsamtools bam file written 5.6 years ago by Nicola Casiraghi450 • updated 5.6 years ago by Devon Ryan92k
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