Showing selected topics • reset
<prev • 21 results • page 1 of 1 • next >
2
votes
0
answers
127
views
0
answers
1
vote
0
answers
166
views
0
answers
1
vote
1
answer
188
views
1
answer
.bam mpileup mapping quality
samtools mapq mpileup sanger fastq written 8 months ago by saar.armon0 • updated 8 months ago by jkbonfield350
8
votes
1
answer
2.1k
views
1
answer
0
votes
1
answer
991
views
1
answer
mpileup mapping quality
samtools mapq written 22 months ago by hpapoli90 • updated 22 months ago by Kevin Blighe60k
4
votes
0
answers
3.6k
views
0
answers
BWA-mem MAPQ Calculation
mq bwa-mem mapping quality mapq alignment written 3.9 years ago by rfriedman2240 • updated 22 months ago by h.mon29k
1
vote
1
answer
1.1k
views
1
answer
difference between mapq=0 and samtools flag 0x900
samtools mapq written 23 months ago by bitpir170 • updated 23 months ago by Devon Ryan95k
0
votes
1
answer
992
views
1
answer
bowtie2 : different MAPQ if -k is set
bowtie2 mapq written 2.6 years ago by Nicolas Rosewick8.8k • updated 2.6 years ago by h.mon29k
8
votes
1
answer
1.2k
views
7 follow
1
answer
MAPQ filtering for clinical applications
mapq clinical ngs written 2.7 years ago by Kevin Blighe60k • updated 2.7 years ago by d-cameron2.1k
3
votes
1
answer
1.1k
views
1
answer
Mapping Quality of reads with mismatches in STAR
rnaseq star mapq written 2.9 years ago by grant.hovhannisyan1.9k • updated 2.9 years ago by Devon Ryan95k
1
vote
1
answer
1.4k
views
1
answer
Structural Variation Discovery: Delly's Output
sv mapq delly written 3.3 years ago by novice960 • updated 2.9 years ago by trausch1.5k
3
votes
1
answer
1.2k
views
1
answer
Increase the fifth column ( MAPQ) value in Sam file
mapq alignment sam sequencing written 2.9 years ago by madhu.912440 • updated 2.9 years ago by novice960
5
votes
1
answer
1.8k
views
1
answer
2
votes
2
answers
2.6k
views
2
answers
5
votes
1
answer
2.0k
views
1
answer
Why the file unmapped.bam, from tophat has all reads with mapq =/> 30?
tophat samstat mapq written 4.8 years ago by tiago2112871.2k • updated 4.8 years ago by geek_y11k
2
votes
2
answers
2.4k
views
2
answers
0
votes
0
answers
2.4k
views
0
answers
4
votes
0
answers
1.7k
views
0
answers
1
vote
1
answer
2.2k
views
1
answer
RNA-seq reads mapping to paralogs with high MAPQ. How to ensure this?
bwa mapq rna-seq paralogs written 5.6 years ago by biotech540 • updated 5.6 years ago by Devon Ryan95k
2
votes
2
answers
2.6k
views
2
answers
Is correct finding unique reads with the flag -F 0x104?
flag bowtie2 mapq bwa rna-seq written 5.8 years ago by miquinhap0 • updated 5.8 years ago by David Fredman1.0k
2
votes
1
answer
2.5k
views
1
answer
How to compute MAPQ distribution with Rsamtools
mapq rsamtools bam file written 6.1 years ago by Nicola Casiraghi450 • updated 6.1 years ago by Devon Ryan95k
<prev • 21 results • page 1 of 1 • next >

Help
Access

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.3.0
Traffic: 1750 users visited in the last hour