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<prev • 110 results • page 1 of 4 • next >
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pwm matrix from txt file python
array python numpy matrix written 3 months ago by vschultz • 0 • updated 3 months ago by shoujun.gu • 310
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104
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Scoring Metric Gene Clusters (General Inquiry)
genome matrix antismash cluster written 4 months ago by biohacker_tobe • 40
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173
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Count Matrix from Single cell RNA
count single cell rna analysis matrix written 4 months ago by David_emir • 370
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1
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128
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Get distance matrix based on node tree
phylogeny matrix tree distance written 4 months ago by Chvatil • 40 • updated 4 months ago by Joe ♦ 17k
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188
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How to check for the presence/absence of unique rows in two different matrices?
r studio R matrix bioinformatics written 5 months ago by miky.zo • 20
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obtaining mean contact/interaction frequency of a given 2D genomic region (loops from from bedpe file) from a hic matrix
bedpe hi-c matrix hic R written 7 months ago by ricardo3889 • 20
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171
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Plotting matrix of values around specific genomic position
R ggplot2 data.frame matrix written 7 months ago by rbronste • 360 • updated 7 months ago by zx8754 ♦ 9.4k
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183
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which scoring matrix to use in shore (shoremap) analysis
matrix shore shoremap written 8 months ago by lieven.sterck ♦ 8.0k
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8 follow
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Looking For Information On Hi-C (Chromosome Conformation Capture) Analysis: Workflows, Best Practices
matrix written 7.4 years ago by cheater149 • 60 • updated 8 months ago by zx8754 ♦ 9.4k
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194
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Extracting matrix columns specific to file1 and file 2, not the overlap or common?
matrix sequence columns written 8 months ago by abdul.suboor123 • 0 • updated 8 months ago by Bastien Hervé ♦ 4.6k
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464
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1
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Phylogenetic tree with 0,1 matrix as the input?
phylogenetic matrix written 9 months ago by Shicheng Guo • 8.3k • updated 9 months ago by Sishuo Wang • 200
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180
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How to create matrix for larger data set?
matrix rna-seq written 9 months ago by mathavanbioinfo • 50 • updated 9 months ago by ATpoint ♦ 36k
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Are there any functions to subtract all features(rows) to a particular value(row) in the same data file?
R python normalization matrix written 10 months ago by mohammedtoufiq91 • 110 • updated 10 months ago by zx8754 ♦ 9.4k
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Extract Interaction Matrix from UpSetR
R interactions upsetr tool matrix written 11 months ago by ste.lu • 60 • updated 11 months ago by Alex Reynolds ♦ 30k
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28k
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R - Append Item Iteratively To Matrix?
R matrix written 9.7 years ago by Darren J. Fitzpatrick • 1.1k • updated 13 months ago by RamRS ♦ 27k
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791
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How to call a R variable in a loop with Slurm?
R slurm matrix written 13 months ago by vincentpailler • 140
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5
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6 follow
5
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Memory-Efficient Way To Transpose Csv/Text File?
matrix scripting written 6.7 years ago by Click downvote • 690 • updated 14 months ago by Biostar ♦♦ 20
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433
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How to make combinations of genotypes given an allele dataframe?
python pandas dataframe matrix written 14 months ago by kristopherfernandez • 10
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5 follow
1
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Error in read.table(file = file, header = header, sep = sep, quote = quote, : duplicate 'row.names' are not allowed
R csv rstudio matrix written 14 months ago by xxxxxxxx • 20 • updated 14 months ago by swbarnes2 ♦ 7.9k
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593
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7 follow
1
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Distribute proportionality calculations on many nodes (SLURM)
matrix slurm correlation parallelization written 15 months ago by vincentpailler • 140 • updated 15 months ago by Jean-Karim Heriche ♦ 22k
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316
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R - snpmatrix - data filtering
matrix snp written 15 months ago by Bioinformatics_NewComer • 320
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625
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Compute the correlations between submatrices
foreach correlation matrix R written 15 months ago by vincentpailler • 140 • updated 15 months ago by RamRS ♦ 27k
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596
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Split a matrix into submatrices
correlat matrix written 15 months ago by vincentpailler • 140
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344
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What kind of protein matrix substitution use for blastX divergent sequences
matrix homology diamond blast written 17 months ago by Chvatil • 40
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Distance Matrix For Metagenomes
matrix written 6.5 years ago by blanca • 10 • updated 20 months ago by Biostar ♦♦ 20
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Make matrix of protein pairwise identities/similarities from multiple protein sequences
pairwise similarity protein identity matrix written 2.4 years ago by al-ash • 140
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NMF not working for identifying mutational signature
ranking nmf mutational signature snp matrix written 20 months ago by dodausp • 140
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Error with combining samples into matrix using abundance_estimates_to_matrix.pl
matrix de edger rna-seq written 4.4 years ago by nikelle.petrillo • 100 • updated 21 months ago by RamRS ♦ 27k
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How to calculate a PSSM(Position Specific Scoring matrix) of a protein sequence
matrix protein written 22 months ago by nkhan.mscs15seecs • 60
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6 follow
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How To Get Snps Matrix For Population Genetic Ananlysis From Snps Variant Files
matrix population genetics snp written 9.6 years ago by Jianfengmao • 310 • updated 22 months ago by RamRS ♦ 27k
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