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4
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201
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5 follow
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Customize fold change legend values in ComplexHeatmap
R colorramp2 matrix complexheatmap circlize written 3 months ago by mohammedtoufiq91 • 110 • updated 4 weeks ago by Biostar ♦♦ 20
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116
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Prop.test for multiple rows/or full matrix and get p.values ?
matrix prop.test statistics written 5 weeks ago by Ankit • 160
0
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0
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173
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0
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what is * in the NCBI Blosum and PAM matrices
matrix blosum pam written 9 weeks ago by nobu.kim66 • 10
8
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3
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241
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3
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R - How to convert a sequence in a fasta file into a matrix
fasta R part_of_an_exercise sequence matrix written 12 weeks ago by kbaitsi • 0
2
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1
answer
2.9k
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1
answer
Clustalw Ignoring Custom Weight Matrix
matrix clustalw alignment written 8.3 years ago by interfect • 0 • updated 3 months ago by Biostar ♦♦ 20
4
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2
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1.4k
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2
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NMF not working for identifying mutational signature
ranking nmf mutational signature snp matrix written 2.3 years ago by dodausp • 140 • updated 6 months ago by Sarah • 0
0
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175
views
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How to correctly assign the matrix row for DGE analysis?
matrix microarray makecontrasts limma dge written 6 months ago by Microuser • 0
0
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1
answer
183
views
1
answer
About the missing values in the feature matrix
matrix classification snp missing value written 6 months ago by Eric Wang • 30 • updated 6 months ago by Mensur Dlakic • 8.3k
0
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1
answer
282
views
1
answer
pwm matrix from txt file python
array python numpy matrix written 9 months ago by vschultz • 0 • updated 9 months ago by shoujun.gu • 310
0
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0
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186
views
0
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Scoring Metric Gene Clusters (General Inquiry)
genome matrix antismash cluster written 10 months ago by biohacker_tobe • 40
1
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0
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537
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0
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Count Matrix from Single cell RNA
count single cell rna analysis matrix written 10 months ago by David_emir • 380
1
vote
1
answer
259
views
1
answer
Get distance matrix based on node tree
phylogeny matrix tree distance written 10 months ago by Chvatil • 50 • updated 10 months ago by Joe ♦ 18k
1
vote
1
answer
295
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1
answer
How to check for the presence/absence of unique rows in two different matrices?
r studio R matrix bioinformatics written 11 months ago by miky.zo • 40
0
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0
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331
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obtaining mean contact/interaction frequency of a given 2D genomic region (loops from from bedpe file) from a hic matrix
bedpe hi-c matrix hic R written 13 months ago by ricardo3889 • 30
2
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1
answer
257
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1
answer
Plotting matrix of values around specific genomic position
R ggplot2 data.frame matrix written 13 months ago by rbronste • 370 • updated 13 months ago by zx8754 ♦ 9.9k
5
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251
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0
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which scoring matrix to use in shore (shoremap) analysis
matrix shore shoremap written 14 months ago by lieven.sterck ♦ 9.5k
15
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4
answers
4.8k
views
8 follow
4
answers
Looking For Information On Hi-C (Chromosome Conformation Capture) Analysis: Workflows, Best Practices
matrix written 8.0 years ago by cheater149 • 60 • updated 14 months ago by zx8754 ♦ 9.9k
1
vote
1
answer
254
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1
answer
Extracting matrix columns specific to file1 and file 2, not the overlap or common?
matrix sequence columns written 15 months ago by abdul.suboor123 • 0 • updated 15 months ago by Bastien Hervé ♦ 4.9k
1
vote
1
answer
765
views
1
answer
Phylogenetic tree with 0,1 matrix as the input?
phylogenetic matrix written 15 months ago by Shicheng Guo • 8.5k • updated 15 months ago by Sishuo Wang • 200
2
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0
answers
266
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How to create matrix for larger data set?
matrix rna-seq written 15 months ago by mathavanbioinfo • 60 • updated 15 months ago by ATpoint ♦ 44k
7
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2
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356
views
2
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Are there any functions to subtract all features(rows) to a particular value(row) in the same data file?
R python normalization matrix written 17 months ago by mohammedtoufiq91 • 110 • updated 17 months ago by zx8754 ♦ 9.9k
1
vote
1
answer
590
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1
answer
Extract Interaction Matrix from UpSetR
R interactions upsetr tool matrix written 18 months ago by ste.lu • 60 • updated 18 months ago by Alex Reynolds ♦ 31k
11
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1
answer
29k
views
1
answer
R - Append Item Iteratively To Matrix?
R matrix written 10.2 years ago by Darren J. Fitzpatrick • 1.1k • updated 20 months ago by _r_am ♦ 32k
0
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1.2k
views
0
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How to call a R variable in a loop with Slurm?
R slurm matrix written 20 months ago by pablo • 160
9
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5
answers
7.9k
views
6 follow
5
answers
Memory-Efficient Way To Transpose Csv/Text File?
matrix scripting written 7.2 years ago by Click downvote • 690 • updated 20 months ago by Biostar ♦♦ 20
0
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560
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How to make combinations of genotypes given an allele dataframe?
python pandas dataframe matrix written 21 months ago by kristopherfernandez • 10
3
votes
1
answer
2.1k
views
5 follow
1
answer
Error in read.table(file = file, header = header, sep = sep, quote = quote, : duplicate 'row.names' are not allowed
R csv rstudio matrix written 21 months ago by xxxxxxxx • 20 • updated 21 months ago by swbarnes2 ♦ 9.4k
1
vote
1
answer
754
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7 follow
1
answer
Distribute proportionality calculations on many nodes (SLURM)
matrix slurm correlation parallelization written 21 months ago by pablo • 160 • updated 21 months ago by Jean-Karim Heriche ♦ 24k
1
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0
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399
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R - snpmatrix - data filtering
matrix snp written 22 months ago by Bioinformatics_NewComer • 320
2
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0
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835
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0
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Compute the correlations between submatrices
foreach correlation matrix R written 22 months ago by pablo • 160 • updated 22 months ago by _r_am ♦ 32k
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