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<prev • 106 results • page 1 of 4 • next >
0
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1
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75
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1
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How to check for the presence/absence of unique rows in two different matrices?
r studio R matrix bioinformatics written 8 days ago by michele.zocchi • 0
0
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0
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120
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obtaining mean contact/interaction frequency of a given 2D genomic region (loops from from bedpe file) from a hic matrix
bedpe hi-c matrix hic R written 9 weeks ago by ricardo3889 • 20
2
votes
1
answer
110
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1
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Plotting matrix of values around specific genomic position
R ggplot2 data.frame matrix written 10 weeks ago by rbronste • 340 • updated 10 weeks ago by zx8754 ♦ 9.0k
5
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0
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125
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0
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which scoring matrix to use in shore (shoremap) analysis
matrix shore shoremap written 3 months ago by lieven.sterck ♦ 6.9k
15
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4
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4.6k
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8 follow
4
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Looking For Information On Hi-C (Chromosome Conformation Capture) Analysis: Workflows, Best Practices
matrix written 7.1 years ago by cheater149 • 60 • updated 3 months ago by zx8754 ♦ 9.0k
1
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1
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139
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1
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Extracting matrix columns specific to file1 and file 2, not the overlap or common?
matrix sequence columns written 4 months ago by abdul.suboor123 • 0 • updated 4 months ago by Bastien Hervé ♦ 4.5k
1
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1
answer
272
views
1
answer
Phylogenetic tree with 0,1 matrix as the input?
phylogenetic matrix written 4 months ago by Shicheng Guo • 8.0k • updated 4 months ago by Sishuo Wang • 190
2
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0
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128
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0
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How to create matrix for larger data set?
matrix rna-seq written 4 months ago by mathavanbioinfo • 50 • updated 4 months ago by ATpoint ♦ 29k
7
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2
answers
228
views
2
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Are there any functions to subtract all features(rows) to a particular value(row) in the same data file?
R python normalization matrix written 6 months ago by mohammedtoufiq91 • 110 • updated 6 months ago by zx8754 ♦ 9.0k
1
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1
answer
277
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1
answer
Extract Interaction Matrix from UpSetR
R interactions upsetr tool matrix written 7 months ago by ste.lu • 60 • updated 7 months ago by Alex Reynolds ♦ 29k
11
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1
answer
27k
views
1
answer
R - Append Item Iteratively To Matrix?
R matrix written 9.3 years ago by Darren J. Fitzpatrick • 1.1k • updated 8 months ago by RamRS ♦ 25k
0
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504
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0
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How to call a R variable in a loop with Slurm?
R slurm matrix written 9 months ago by vincentpailler • 110
9
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5
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6.9k
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6 follow
5
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Memory-Efficient Way To Transpose Csv/Text File?
matrix scripting written 6.3 years ago by Click downvote • 670 • updated 9 months ago by Biostar ♦♦ 20
0
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0
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338
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0
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How to make combinations of genotypes given an allele dataframe?
python pandas dataframe matrix written 10 months ago by kristopherfernandez • 10
3
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1
answer
1.1k
views
5 follow
1
answer
Error in read.table(file = file, header = header, sep = sep, quote = quote, : duplicate 'row.names' are not allowed
R csv rstudio matrix written 10 months ago by xxxxxxxx • 20 • updated 10 months ago by swbarnes2 ♦ 7.4k
1
vote
1
answer
470
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7 follow
1
answer
Distribute proportionality calculations on many nodes (SLURM)
matrix slurm correlation parallelization written 10 months ago by vincentpailler • 110 • updated 10 months ago by Jean-Karim Heriche ♦ 21k
1
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0
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266
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0
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R - snpmatrix - data filtering
matrix snp written 10 months ago by Bioinformatics_NewComer • 320
2
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0
answers
518
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0
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Compute the correlations between submatrices
foreach correlation matrix R written 11 months ago by vincentpailler • 110 • updated 11 months ago by RamRS ♦ 25k
0
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0
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283
views
0
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Split a matrix into submatrices
correlat matrix written 11 months ago by vincentpailler • 110
0
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0
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294
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0
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What kind of protein matrix substitution use for blastX divergent sequences
matrix homology diamond blast written 12 months ago by Darill • 40
1
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2
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1.5k
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2
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Distance Matrix For Metagenomes
matrix written 6.1 years ago by blanca • 10 • updated 15 months ago by Biostar ♦♦ 20
2
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4
answers
3.3k
views
4
answers
Make matrix of protein pairwise identities/similarities from multiple protein sequences
pairwise similarity protein identity matrix written 24 months ago by al-ash • 130
4
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1
answer
872
views
1
answer
NMF not working for identifying mutational signature
ranking nmf mutational signature snp matrix written 16 months ago by dodausp • 130
1
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1
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1.4k
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1
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Error with combining samples into matrix using abundance_estimates_to_matrix.pl
matrix de edger rna-seq written 4.0 years ago by nikelle.petrillo • 100 • updated 17 months ago by RamRS ♦ 25k
0
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0
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1.4k
views
0
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How to calculate a PSSM(Position Specific Scoring matrix) of a protein sequence
matrix protein written 17 months ago by nkhan.mscs15seecs • 50
11
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3
answers
3.4k
views
6 follow
3
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How To Get Snps Matrix For Population Genetic Ananlysis From Snps Variant Files
matrix population genetics snp written 9.2 years ago by Jianfengmao • 310 • updated 17 months ago by RamRS ♦ 25k
18
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2
answers
2.7k
views
9 follow
2
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How to plot a matrix with numbers in the matrix colored using ggplot2 or other ways in R?
vcf matrix ggplot2 snp R written 18 months ago by DanielC • 100
2
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0
answers
641
views
0
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Circlize package ?
matrix chord circlize R diagram written 19 months ago by pritampkp15 • 0 • updated 19 months ago by zx8754 ♦ 9.0k
1
vote
1
answer
599
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1
answer
Software to group full length 16S rRNA sequences based on identity threshold
species rrna 16s identity matrix written 19 months ago by fhsantanna • 460 • updated 19 months ago by Carambakaracho • 2.0k
3
votes
1
answer
491
views
1
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Normalised counts of control samples in gene expression matrix
R network expression matrix rna-seq matrix written 20 months ago by Pranavathiyani G • 290 • updated 20 months ago by Devon Ryan ♦ 94k
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