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written 16 months ago by
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15 months ago by
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- A: Get locus_tag list from gene list using genbank file and Biopython
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Recent Replies
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C: Aligning short oligos containing Ns to a genome by
archana.bioinfo87 • 170
Hi, If your file is not too big than you can try this command. Here your query sequence will act...
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C: Aligning short oligos containing Ns to a genome by
ATpoint ♦ 24k
Not sure about BLAST but most NGS aligners consider ambiguous (non-ATCG) characters as mismatches...
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swbarnes2 ♦ 6.7k
I don't think comparing values from two different pipelines is going to yield anything meaningful...
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Mensur Dlakic • 1.7k
There are several reasons why a protein would have `uncharacterized`, `unknown` or `hypothetical`...
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nihaldm169 • 0
The speed doesn't matter, no. And I don't know how big the sequences are... We got sent two files...
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rosgreg21703 • 0
Yes exactly. What's more, I wanted to solve this problem from scratch using Python, that's why at...
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C: Comparing values of a column if it falls between values of two columns of a diff by
zx8754 ♦ 8.3k
Feel free to ask a new question with example data that is **more** representative to your real da...
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C: Infer Experiment strand information interpretation by
dnzkursun • 0
Then, it is fr-firststrand. Thank you for the link.
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C: Infer Experiment strand information interpretation by
genomax ♦ 73k
See https://www.biostars.org/p/125344/#125347
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C: Extract genes from gbk file. by
savscosta • 0
I already searched in various topics in the site. And I still have difficult to get this informa...
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gable_works • 20
It sounds like the input query gene genomic data determined that a subset of patients/samples hav...
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A: Get locus_tag list from gene list using genbank file and Biopython by
savscosta • 0
I'm having a similar problem If i have a list with gene names and i want to get all the informa...
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