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3
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Running Beagle for imputation
beagle imputation memory written 9 days ago by nour.hadjz • 0 • updated 9 days ago by zx8754 ♦ 4.3k
1
vote
0
answers
1.4k
views
0
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SPAdes is running out of memory
hybrid spades memory assembly fungi written 9 months ago by Lina F • 120 • updated 9 months ago by h.mon ♦ 14k
6
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1
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1.5k
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7 follow
1
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memory consumption of bwa-mem
bwa-mem ram mapping memory written 14 months ago by Lars • 540 • updated 14 months ago by d-cameron • 1.7k
0
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0
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547
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storage space for BAM files in the cloud, on the server, Galaxy or GenomeSpace
mega-files cloud memory storage written 20 months ago by Robert_Weinberg • 0 • updated 19 months ago by Biostar ♦♦ 20
3
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2
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590
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2
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about computer memory and mpileup files
varscan2 memory snp written 20 months ago by Bogdan • 480 • updated 20 months ago by karl.stamm ♦ 3.2k
8
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3
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7 follow
3
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How To Solve An Out-Of-Memory Error When Using Usearch Chimera Detection
memory written 5.5 years ago by upendrakumar.devisetty • 350 • updated 20 months ago by Simply Bioinformatics • 80
1
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638
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1
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Malloc_error_break and job termination while running Kallisto
kallisto rna-seq memory written 22 months ago by MagnumOpus • 0
2
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1
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2.3k
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1
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How to increase cytoscape memory?
cytoscape memory written 4.0 years ago by Omid • 510 • updated 2.3 years ago by Biostar ♦♦ 20
2
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1
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1.3k
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1
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Running out of memory in R
genie3 R memory myposts written 2.3 years ago by Amir Hajian • 40
2
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1
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1.5k
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1
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samtools mpileup memory leakage
variant calling samtools bcftools memory mpileup written 2.3 years ago by lkw222 • 30 • updated 2.3 years ago by John Marshall • 1.2k
0
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1
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1.5k
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1
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Problems with BLAST db, maybe install issue?
software error install memory blast written 2.5 years ago by sstevens2 • 0 • updated 2.5 years ago by satshil.r • 50
3
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3
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2.7k
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3
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FASTQC and PacBio reads
java memory pacbio fastqc written 2.6 years ago by tptacek3050 • 60 • updated 2.6 years ago by mjhsieh • 0
17
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5
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3.7k
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7 follow
5
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Is Blast+ Running As Fast As It Could ?
memory blast written 6.3 years ago by Amr • 140 • updated 2.7 years ago by Manoj • 20
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1
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1.5k
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1
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How to estimate peak memory usage of SOAPdenovo
assembly soapdenovo memory written 2.9 years ago by billzt • 20 • updated 2.9 years ago by Brian Bushnell ♦ 15k
18
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5
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11k
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5 follow
5
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Processing Fastq Files In R/Bioconductor Without Reading Entire Files Into Memory?
R bioconductor fastq memory written 7.5 years ago by Ryan Thompson • 3.3k
0
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0
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2.8k
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0
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bwa mem failed to allocate memory
bwa-mem allocate memory bwa written 3.3 years ago by cmo • 30
4
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3
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1.2k
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5 follow
3
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Blastn Runtime 606 Queries
memory blast written 6.7 years ago by W Langdon • 30 • updated 3.4 years ago by Biostar ♦♦ 20
7
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3
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6.3k
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7 follow
3
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Convert Fasta Alignment To Phylip In Constant Memory
fasta alignment memory written 5.6 years ago by xapple • 230 • updated 3.5 years ago by zeeefa • 80
3
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3
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1.5k
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3
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Problem with minia and bad_alloc, low memory limits?
memory minia bad_alloc written 3.9 years ago by jorgegiacomelli • 10
2
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1
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1.2k
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1
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How To Use Perl To Input A Large Ngs Data File?
perl memory written 4.5 years ago by sanchezcavani • 210 • updated 4.5 years ago by Istvan Albert ♦♦ 76k
4
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1
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1.8k
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1
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Emboss Needle Algorithm'S Memory Usage Increases When I Run Many Processes Of It One After Another
python alignment memory written 4.5 years ago by TabeaH • 30 • updated 4.5 years ago by Asaf ♦ 4.8k
4
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1
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1.2k
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1
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Does Running Velvet With Gzipped Files Reduce Memory Usage?
memory velvet written 4.7 years ago by johnstantongeddes • 370 • updated 4.6 years ago by Biostar ♦♦ 20
2
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1
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2.0k
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5 follow
1
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Memory Problems Running Gatk Printreads
memory written 4.9 years ago by ajc8 • 120
27
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2
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2.9k
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8 follow
2
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Peer-Reviewed Justification For Big Ass Servers.
server memory written 6.2 years ago by Yannick Wurm • 2.3k • updated 4.9 years ago by Jeremy Leipzig ♦ 17k
2
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1
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2.0k
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1
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Realignertargetcreator Error: Not Enough Memory
gatk memory written 4.9 years ago by xiaoyanli82 • 0
5
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2
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5.7k
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2
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Tophat Time And Memory Requirement
tophat memory rna-seq written 6.2 years ago by Nicolas Rosewick • 6.3k • updated 5.8 years ago by Malachi Griffith ♦ 16k
5
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2
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2.8k
views
2
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Blast 2.2.24+ Database Error
memory blast written 6.7 years ago by Niek De Klein • 2.4k
2
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1
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1.9k
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1
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Parallelization Efficiency And Memory Usage Of Abyss, Allpaths-Lg
assembly memory written 6.1 years ago by David M • 540 • updated 6.1 years ago by Sujai Kumar • 230
1
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1
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1.3k
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1
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Kegg Meta Data Download - Out Of Memory Because Of Data Size
java kegg memory written 6.2 years ago by Siva Kumar • 30 • updated 6.2 years ago by Lars Juhl Jensen ♦ 11k
9
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1
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1.7k
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1
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Bioperl: Running Out Of Memory Using Bio::Popgen::Population
perl bioperl memory written 6.3 years ago by Abdel • 330 • updated 6.3 years ago by Zev.Kronenberg ♦ 11k
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