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2
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How to increase cytoscape memory?
cytoscape memory written 4.8 years ago by Omid • 540 • updated 5 months ago by Biostar ♦♦ 20
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0
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896
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How to solve error memory R package pedigree
software error R pedigree memory written 8 months ago by Kian • 40
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0
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501
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BWA. Allocate memory
next-gen alignment memory bwa sequencing written 8 months ago by windsur • 10
3
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1
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821
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1
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Running Beagle for imputation
beagle imputation memory written 10 months ago by nour.hadjz • 0 • updated 10 months ago by zx8754 ♦ 6.8k
2
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3.1k
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SPAdes is running out of memory
hybrid spades memory assembly fungi written 19 months ago by Lina F • 150 • updated 19 months ago by h.mon ♦ 24k
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7 follow
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memory consumption of bwa-mem
bwa-mem ram mapping memory written 2.0 years ago by Lars • 640 • updated 2.0 years ago by d-cameron • 2.0k
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725
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storage space for BAM files in the cloud, on the server, Galaxy or GenomeSpace
mega-files cloud memory storage written 2.5 years ago by Robert_Weinberg • 0 • updated 2.4 years ago by Biostar ♦♦ 20
3
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2
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818
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about computer memory and mpileup files
varscan2 memory snp written 2.5 years ago by Bogdan • 720 • updated 2.5 years ago by karl.stamm ♦ 3.4k
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How To Solve An Out-Of-Memory Error When Using Usearch Chimera Detection
memory written 6.3 years ago by upendrakumar.devisetty • 350 • updated 2.5 years ago by Simply Bioinformatics • 110
1
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Malloc_error_break and job termination while running Kallisto
kallisto rna-seq memory written 2.7 years ago by MagnumOpus • 0
2
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1
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1.7k
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1
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Running out of memory in R
genie3 R memory myposts written 3.1 years ago by Amir Hajian • 40
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1
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2.0k
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1
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samtools mpileup memory leakage
variant calling samtools bcftools memory mpileup written 3.2 years ago by lkw222 • 30 • updated 3.2 years ago by John Marshall • 1.5k
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Problems with BLAST db, maybe install issue?
software error install memory blast written 3.3 years ago by sstevens2 • 0 • updated 3.3 years ago by satshil.r • 50
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3.5k
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FASTQC and PacBio reads
java memory pacbio fastqc written 3.5 years ago by tptacek3050 • 60 • updated 3.5 years ago by mjhsieh • 0
17
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5
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7 follow
5
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Is Blast+ Running As Fast As It Could ?
memory blast written 7.2 years ago by Amr • 140 • updated 3.5 years ago by Manoj • 30
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1.7k
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How to estimate peak memory usage of SOAPdenovo
assembly soapdenovo memory written 3.8 years ago by billzt • 20 • updated 3.8 years ago by Brian Bushnell ♦ 16k
18
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5
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13k
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5 follow
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Processing Fastq Files In R/Bioconductor Without Reading Entire Files Into Memory?
R bioconductor fastq memory written 8.4 years ago by Ryan Thompson • 3.4k
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bwa mem failed to allocate memory
bwa-mem allocate memory bwa written 4.2 years ago by cmo • 50
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3
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1.4k
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5 follow
3
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Blastn Runtime 606 Queries
memory blast written 7.6 years ago by W Langdon • 30 • updated 4.2 years ago by Biostar ♦♦ 20
7
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3
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7.0k
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7 follow
3
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Convert Fasta Alignment To Phylip In Constant Memory
fasta alignment memory written 6.4 years ago by xapple • 230 • updated 4.3 years ago by zeeefa • 80
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Problem with minia and bad_alloc, low memory limits?
memory minia bad_alloc written 4.7 years ago by jorgegiacomelli • 10
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1
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1.4k
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1
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How To Use Perl To Input A Large Ngs Data File?
perl memory written 5.3 years ago by sanchezcavani • 210 • updated 5.3 years ago by Istvan Albert ♦♦ 79k
4
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1
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2.0k
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Emboss Needle Algorithm'S Memory Usage Increases When I Run Many Processes Of It One After Another
python alignment memory written 5.3 years ago by TabeaH • 30 • updated 5.3 years ago by Asaf ♦ 5.3k
4
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1
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1.4k
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Does Running Velvet With Gzipped Files Reduce Memory Usage?
memory velvet written 5.5 years ago by johnstantongeddes • 410 • updated 5.4 years ago by Biostar ♦♦ 20
2
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5 follow
1
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Memory Problems Running Gatk Printreads
memory written 5.7 years ago by ajc8 • 120
27
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2
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3.1k
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8 follow
2
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Peer-Reviewed Justification For Big Ass Servers.
server memory written 7.0 years ago by Yannick Wurm • 2.3k • updated 5.7 years ago by Jeremy Leipzig ♦ 18k
2
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1
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2.2k
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1
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Realignertargetcreator Error: Not Enough Memory
gatk memory written 5.8 years ago by xiaoyanli82 • 0
5
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2
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6.7k
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2
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Tophat Time And Memory Requirement
tophat memory rna-seq written 7.0 years ago by Nicolas Rosewick ♦ 7.4k • updated 6.6 years ago by Malachi Griffith ♦ 17k
5
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2
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3.2k
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2
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Blast 2.2.24+ Database Error
memory blast written 7.5 years ago by Niek De Klein • 2.4k
2
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1
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2.1k
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1
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Parallelization Efficiency And Memory Usage Of Abyss, Allpaths-Lg
assembly memory written 7.0 years ago by David M • 550 • updated 7.0 years ago by Sujai Kumar • 240
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