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Comparing Many Bed Files from GEO
geo bed chip-seq atac-seq meta-analysis written 6 days ago by cthangav • 0
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644
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Metafor microarray meta-analysis inputs
metafor meta-analysis written 2.6 years ago by ab123 • 50 • updated 19 days ago by pharmhax • 0
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Can I use Stouffer's Z method to do meta-meta-analysis or second order meta analysis?
meta-analysis statistics written 5 weeks ago by andreas131298 • 0
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How to determine effect allele of GWAS meta-analysis
gwas meta-analysis written 10 weeks ago by helen • 40 • updated 7 weeks ago by hongbo919 • 20
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limma DEG analysis with count matrix as input
limma microarray meta-analysis written 9 weeks ago by asumani • 60
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Meta-Analysis of Microarray data (Afyymetrix)
R meta-analysis affymetrix microarray written 11 weeks ago by reza • 230
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Using GeneMeta R Package to meta-analyse multiple gene expression datasets
gene expression genemeta meta-analysis written 12 weeks ago by psyc_biostars • 0
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Aggreggating RNA-Seq log2FC & test statistics for GSEA ranking
meta-analysis rna-seq gsea written 3 months ago by monovich • 0 • updated 3 months ago by geek_y ♦ 11k
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Differentially Expressed Genes in merged datasets; How can the differentially expressed genes be found following removing the batch effect?
R batch-effect degs meta-analysis written 4 months ago by amirmehrgou • 0 • updated 4 months ago by ATpoint ♦ 40k
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How to deal with sample size problem in GWAS meta-analysis
gwas meta-analysis written 4 months ago by helen • 40
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Trouble using get_raw() function in crossmeta R package to extract GEO data for differential expression analysis
crossmeta R meta-analysis gene-expression written 5 months ago by gggdddcrossmeta • 0 • updated 4 months ago by pokhraj.pg • 0
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Output of METAL meta-analysis: which allele does the beta refer to?
metal meta-analysis written 6.0 years ago by smnlalli • 0 • updated 6 months ago by Olliepain • 0
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279
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METAL meta-analysis software crash
gwas metal meta-analysis written 6 months ago by ydadmehr • 0
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How to find Standard Error (SE) values when not provided in GWAS summary stats?
gwas plink metal standard error meta-analysis written 6 months ago by ydadmehr • 0 • updated 6 months ago by Sam • 3.2k
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Meta-Analysis effect size is not in the same direction as GWAS effect sizes.
R metal meta-analysis gwas written 7 months ago by lamia_203 • 80 • updated 7 months ago by Lemire • 590
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Combining different conditions of study from different experiments (same platform) for microarray meta-analysis
microarray control meta-analysis test written 20 months ago by devikaparvathy • 40 • updated 8 months ago by a.lathifbt • 20
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METAL (gwas meta-analysis tool)
gwas metal meta-analysis genomics bioinformatics written 9 months ago by bigfoot • 10
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Meta-analysis using Genome-Wide Association Meta-Analysis (GWAMA) tool
gwas meta-analysis snp written 9 months ago by Star • 20
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Caclulate effect estimates and SE from Z scores
gwas meta-analysis R written 3.7 years ago by muralinmars • 80 • updated 10 months ago by atlas.akhan • 0
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Meta-analysis on microaray data, when a sinlge experiment contains diferent tissues
meta-analysis microarray written 13 months ago by catechize.2.learn • 120 • updated 13 months ago by Kevin Blighe ♦ 66k
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METAL output direction column contains 0
gwas metal meta-analysis written 14 months ago by joellepasman • 0
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360
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Robust rank aggregation with imprecise p values
robust rank aggregation meta-analysis written 14 months ago by english.server • 210
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Odds ratio confidence interval in meta-analysis
gwas plink meta-analysis written 2.8 years ago by alessandrotestori7 • 390 • updated 15 months ago by emma.jones56 • 0
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using different microarray datasets (meta-analysis?) for DEG pipeline
meta-analysis microarray deg batch effect written 16 months ago by mosesoo • 30 • updated 16 months ago by Kevin Blighe ♦ 66k
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470
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Batch effect correction for gene expression data for meta-analysis
batch-effect microarray meta-analysis written 17 months ago by nash52 • 0
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RNAseq data anti-pd1 treatment
immunotherapy meta-analysis rna-seq written 19 months ago by guillaume.rbt • 830
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730
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R package for cross-platform meta analysis
corss-platform meta-analysis written 19 months ago by BioLite • 20 • updated 19 months ago by Kevin Blighe ♦ 66k
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Genome wide association studies (GWAS) Meta-analysis
meta-analysis plink written 23 months ago by somayeh bakhshalizadeh • 50
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How plink calculates meta-analysis
gwama metal meta-analysis plink written 24 months ago by johnS • 10 • updated 23 months ago by Biostar ♦♦ 20
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candidate genes mining of Meta-QTL region
qtl candidate genes mining meta-analysis written 2.2 years ago by belaarouch.95 • 0
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