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Job: Postdoc Fellows: Long Read based Metagenomics and Meta-epigenomics
microbiome metagenomics metagenome long reads job written 22 days ago by fanggang • 50
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Make taxonomy bar plot using qiime2 and error in denoise procedure and training classifier
denoise bar plot taxonomy metagenome qiime2 written 8 weeks ago by pple2202 • 0
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Normalisation of read mapping counts to account for contig length
otu metagenome normalisation read mapping written 8 weeks ago by valerie • 0
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KEGG Orthology linkage Pathways
genome metagenome kegg written 9 weeks ago by vincentdunon • 0
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Binning suitable for 16S and WGS metagenomes
wgs 16s metagenome binning written 10 weeks ago by f.a.galkin • 0
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MG-RAST download by job ids.
genome sequence ngs next-gen metagenome written 10 weeks ago by doctor.dee005 • 130
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Gut metagenomes with age metadata
gut data sets metagenome written 12 weeks ago by f.a.galkin • 0 • updated 11 weeks ago by Sej Modha ♦ 3.6k
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Metagenome sequencing vs Bacterial whole genome sequencing protocols
whole gneome bacteria metagenome sequencing written 4 months ago by anwesh023 • 10 • updated 3 months ago by tokeemdtareq • 40
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Bacterial mobile elements database
transposons metagenome is written 3 months ago by hed.robin • 30
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How can I pick up reads belongs to one isolates from shotgun metagenome
metagenome written 4 months ago by xuling2015 • 10
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Plasmidome recovery from metagenomes: why and how?
plasmid metagenomics metagenome plasmids written 6 months ago by dark.lord • 0 • updated 6 months ago by h.mon ♦ 19k
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Job: early-career bioinformatician opportunity at NIH
microbiome qiime metagenome job dada2 written 7 months ago by shurjo.sen • 10
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Which file can be upload in MG-RAST
assembly metagenome mg-rast written 7 months ago by hafroz01 • 0
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How to download KEGG database for metagenomic analysis?
metagenome kegg sequencing written 11 months ago by anderson.nb6 • 20 • updated 11 months ago by Ram ♦ 17k
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SEED analyses in MEGAN: How to connect Seed database with blast data
megan metagenome blast seed written 13 months ago by Bumble • 0 • updated 11 months ago by Biostar ♦♦ 20
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Can/should Bracken be used with metatranscriptome data?
kraken bracken metagenome metatranscriptome written 12 months ago by kristenbeck527 • 10 • updated 12 months ago by h.mon ♦ 19k
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Microbial diversity analysis using whole-genome metagenomic data
mothur taxonomy metagenome qiime written 13 months ago by elsoja • 20 • updated 13 months ago by Brian Bushnell ♦ 15k
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Tips for increasing metaSPAdes assembly speed for 7 billion reads?
reads assembly metaspades spades metagenome written 13 months ago by anin.gregory • 80
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joining paired end illumina data for metagenomic analysis
illumina 16s paired end metagenome qiime written 16 months ago by cvu • 120
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Contigs Taxonomy from assembled metagenomes
metagenomics taxonomy metagenome contig written 19 months ago by David • 120
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QIIME OTU-picking: doubles counts or not?
otu-picking metagenome mapping qiime written 20 months ago by lotus28 • 20
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Fungal marker selection
its primers metagenome fungal human microbiome written 2.9 years ago by fatemehsanjar • 0 • updated 21 months ago by Biostar ♦♦ 20
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Metagenome Next Generation Sequencing
genome metagenome metatranscriptome sequencing written 21 months ago by cvu • 120
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Comparison of 16S- & WGS-derived community composition
wgs 16s metagenome microbiome pcr written 22 months ago by lotus28 • 20 • updated 22 months ago by 5heikki ♦ 7.6k
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inconsistency in aligning metagenomic data in Bowtie2
bowtie2 alignment metagenome written 22 months ago by oatirosh • 0
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Getting species counts from Illumina metagenome data
wgs metagenome species composition metaphlan2 written 22 months ago by lotus28 • 20
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Metagenomic Iontorrent reads: filtering and denoising
reads denoise metagenome filtering written 23 months ago by fhsantanna • 410 • updated 23 months ago by sacha • 1.5k
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significant testing for species abundancy
pvalue metagenome abundance written 2.1 years ago by Prasad • 1.5k
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How to get the abundance of genes in metagenomes from MG RAST
metagenome mg rast abundance written 3.9 years ago by khorms • 30 • updated 2.2 years ago by liuyifan2014 • 40
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Rarefaction curves for OTU Data
otus next-gen metagenome written 2.3 years ago by ricardo.couto • 10 • updated 2.3 years ago by Steven Lakin • 1.4k
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