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<prev • 313 results • page 1 of 11 • next >
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Kraken2 database curation
metagenomics kraken written 4 days ago by Asaf ♦ 5.0k
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Help with species level ID (L 7) in qiime
microbiome metagenomics otu written 6 days ago by lkw222 • 30
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samtools sort: legacy usage
genome metagenomics samtools sort written 7 days ago by c.e.chong • 0 • updated 7 days ago by h.mon ♦ 21k
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cd-hit-est total seq value doesn't match number of sequences being compared?
cd-hit-est metagenomics binning filtering cd-hit written 13 days ago by c.e.chong • 0
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Comparing two OTU tables
microbiome 16s microbiota metagenomics written 11 weeks ago by jeremieauger • 20 • updated 17 days ago by Biostar ♦♦ 20
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Which metagenomics tool works best?
genome assembly metagenomics alignment sequencing written 21 days ago by Seq225 • 70
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Extracted mapped shotgun metagenomic reads to reference genome. SPAdes or metaSPAdes for de-novo assembly?
de-novo assembly metagenomics written 4 weeks ago by O.rka • 60 • updated 28 days ago by h.mon ♦ 21k
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Can anyone point me in the direction of some raw BAM formatted bacterial PacBio data
metagenomics bam prokaryotes pacbio pbccs written 4 weeks ago by TEF • 0 • updated 4 weeks ago by genomax ♦ 58k
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Relative RNA abundance in Metatranscriptomes: how to normalize RNA abundance by DNA
metatranscriptomics metagenomics written 5 weeks ago by mossigstamboulian • 30
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Combined metagenomics-metatranscriptomics analysis
metatranscriptomics metagenomics written 12 weeks ago by bird77 • 20 • updated 6 weeks ago by Biostar ♦♦ 20
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Job: Postdoc @ Mount Sinai School of Medicine (New York City): Microbiome and Human Diseases
microbiome metagenomics metagenome long reads job written 11 weeks ago by fanggang • 60
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Any published data with known percentage of virus sequences?
metagenomics next-gen written 7 weeks ago by novice • 830
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Tutorial: Classifying metagenomics sequences at species level using CLARK for bacterial metagenome
genome metagenomics ecology tutorial written 2.7 years ago by shilparaopradeep • 170 • updated 7 weeks ago by RamRS ♦ 19k
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Tool: metaViC: Virus metagenomics pipeline for unknown host or in absence of a host genome
assembly ngs metagenomics tool written 2.2 years ago by Sej Modha ♦ 3.8k • updated 8 weeks ago by fernandoavila3428 • 0
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201
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How to perform metagenomic binning using ESOM?
metagenomics binning esom written 8 weeks ago by Vijay Lakhujani ♦ 3.1k • updated 8 weeks ago by 5heikki ♦ 7.8k
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News: Training in Metagenomics Data Analysis @ NIH, October 16 - 19, 2018
metagenomics news written 8 weeks ago by AABI • 100
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calculating sequencing coverage for metagenome samples
illumina-hi-seq metagenomics sam bowtie2 written 9 weeks ago by mossigstamboulian • 30
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137
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Decision tree algorithms
R metagenomics written 3 months ago by AQ7 • 30 • updated 11 weeks ago by Biostar ♦♦ 20
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182
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Taxonomic ids of all pathongenic/BSL<1 microbes.
metagenomics written 12 weeks ago by bio.erikson • 10
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Tutorial: Tools For Metagenomic Data Analysis
metagenomics next-gen tutorial written 6.0 years ago by vijay • 1.4k • updated 3 months ago by MetaTK • 10
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Conflict of abundances on different taxonomic levels using centrifuge
centrifuge metagenomics written 3 months ago by grant.hovhannisyan • 1.2k • updated 3 months ago by Rob ♦ 2.8k
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GC content in metagenomic data
assembly metagenomics written 3 months ago by bioinfo • 680
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161
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Metagenomics community profiling approaches.
wgs metagenomics community binning written 3 months ago by f.a.galkin • 0
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150
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taxa identification using signature vs alignment to refseq
signatures metagenomics alignment refseq written 3 months ago by bitpir • 100
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Metagenomics: rationale behind Q trimming
illumina metagenomics bbduk quality trimming written 3 months ago by f.a.galkin • 0 • updated 3 months ago by finswimmer ♦ 6.7k
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Software for Taxonomic Profiling of Fungi
metagenomics taxonomy metagenomic fungi written 3 months ago by bhanratt • 20 • updated 3 months ago by toralmanvar • 650
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230
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PICRUSt mapping file
metagenomics picrust written 4 months ago by eroljb • 0
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Are There Simple Web Forms For Searching Proteins Against Metagenomic And Microbiome Data ?
metagenomics written 6.4 years ago by cdsouthan • 1.8k • updated 4 months ago by Biostar ♦♦ 20
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187
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How to map viral RNA from human blood samples?
metagenomics mapping virus written 4 months ago by caggtaagtat • 370
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What are the industry-leading methods of benchmarking metagenomics taxonomy identification?
metagenomics taxonomy written 6 months ago by JacobS • 890 • updated 5 months ago by Biostar ♦♦ 20
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