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<prev • 454 results • page 1 of 16 • next >
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Potential Bacteria Contamination - RNA-Seq
metagenomics rna-seq written 6 days ago by VHahaut • 1.1k • updated 6 days ago by genomax ♦ 87k
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Is there a database or catalog of the proteins secreted through the Type 3 Secretion System available?
metagenomics microbiology written 6 days ago by Vincent Laufer • 1.1k
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How to generate Beta diversity boxplot from phyloseq object?
metagenomics beta diversity phyloseq written 10 days ago by dpc • 140
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Better way for speedup of Humann3 metagenomics analysis pipeline?
humann metagenomics alignment pipeline written 4 weeks ago by boaty • 110 • updated 11 days ago by Biostar ♦♦ 20
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How to find out if contig size is limited by repeats
assembly metagenomics written 16 days ago by lagartija • 90
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Generating taxa-wise unifrac distance Matrix using phyloseq
R metagenomics phyloseq unifrac written 17 days ago by mail2steff • 60
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Density vs gene count plot
wgs metagenomics gene count mgwas written 23 days ago by dpc • 140 • updated 23 days ago by antonioggsousa • 860
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95
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Gene count vs Relative gene abundance
wgs metagenomics written 24 days ago by dpc • 140 • updated 24 days ago by Friederike ♦ 5.9k
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MG RAST for Eukaryota
metagenomics mg-rast kegg eukaryota functions written 24 days ago by TomM • 0
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125
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Significantly different number of reads between two paired files when runing kneaddata
metagenomics kneaddata remove host reads written 11 weeks ago by zhangdengwei • 70 • updated 28 days ago by Biostar ♦♦ 20
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stacked barplot color choice
R metagenomics 16s phyloseq written 5 weeks ago by dpc • 140 • updated 5 weeks ago by antonioggsousa • 860
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Forum: Metagenomics Tutoring Opportunity
metagenomics tutoring forum microbial written 19 months ago by MK2000 • 30 • updated 6 weeks ago by aftabakhtar654 • 0
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Creating a bed file from a de novo fasta file
bedtools assembly metagenomics written 6 weeks ago by c.e.chong • 20
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Differential abundance analysis at high taxonomic ranks
differential abundance metagenomics 16s written 6 weeks ago by Erwann • 10
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Cut off for dist.seqs step in MOTHUR
mothur 16s metagenomics written 7 weeks ago by dpc • 140
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92
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Mock community in MOTHUR
mothur 16s metagenomics written 7 weeks ago by dpc • 140 • updated 7 weeks ago by Asaf ♦ 8.3k
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125
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how to filter microbial genome based on quality score
metagenomics repophlan written 7 weeks ago by Bioinfonext • 220
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76
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16S rRNA Filter and Trimming methods
R 16s rrna metagenomics sequencing written 8 weeks ago by bpvalderrama • 0
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95
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Metagenomics public blast server?
metagenomics blast gos written 8 weeks ago by from_biostars • 0 • updated 8 weeks ago by Biostar ♦♦ 20
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Can I analyse single-ended WGS data with average readlength 35 bp by MetPhlAn?
wgs readlength metagenomics bowtie metaphlan written 8 weeks ago by dpc • 140
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Differential abundance of 15 genes in metagenomic sample.
microbiome metagenomics next-gen sequencing written 2.7 years ago by mdurrant • 10 • updated 10 weeks ago by Biostar ♦♦ 20
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Filter bam files based on length of contig
assembly metagenomics bam map sam written 10 weeks ago by susheelbhanu • 0 • updated 10 weeks ago by ATpoint ♦ 36k
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Megan SEED analysis
gene metagenomics tool megan written 10 weeks ago by carolinnerdc • 0 • updated 10 weeks ago by ATpoint ♦ 36k
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control and test samples name of PRJEB12123
sra metagenomics sequencing written 11 weeks ago by dpc • 140
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How to decide what BLAST settings to use when searching for functional genes in a metagenome
metagenomics microbial blast sequencing written 11 weeks ago by crystal4 • 0 • updated 11 weeks ago by Mensur Dlakic • 6.0k
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Transforming MEGAN output with Krona
krona metagenomics megan written 5 months ago by nisrinalulu • 10 • updated 3 months ago by Biostar ♦♦ 20
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News: Training in Metagenomics Data Analysis, May 26-29,2020
news next-gen metagenomics training dataanalysis written 3 months ago by AABI • 120
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82
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Tracking Down Reference Database For Alignment
alignment metagenomics sequence sequencing written 3 months ago by blake.mcmurray • 0 • updated 3 months ago by genomax ♦ 87k
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160
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Bioinformatics workstation Spec advice: Metagenomics
metagenomics ram workstation written 3 months ago by Biogeek • 400
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Calculate gene coverage from Blast results
metagenomics coverage blast written 3 months ago by Happy_flower • 0 • updated 3 months ago by Istvan Albert ♦♦ 84k
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