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<prev • 328 results • page 1 of 11 • next >
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GenBank ID to GO term
annotation metagenomics written 9 hours ago by lagartija • 10 • updated 7 hours ago by b.nota ♦ 5.6k
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Metagenomics best reference DB
greengenes metagenomics silva 16s written 11 hours ago by lotus28 • 30
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blast against metagenome shotgun data - not getting the hits expected
metagenomics blast written 1 day ago by christina • 0 • updated 1 day ago by 5heikki ♦ 8.0k
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Annotation of assembled metagenomic data
metagenomics taxonomy written 2 days ago by lagartija • 10 • updated 2 days ago by Juke-34 • 1.7k
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News: Training in Metagenomics Data Analysis @ NIH, March 12-15,2019
metagenomics analysis news training written 2 days ago by AABI • 100
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Classify Or Align ?
classification metagenomics alignment hmm blast written 7.0 years ago by Manu Prestat ♦ 3.9k • updated 5 days ago by lagartija • 10
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Anyone got virmap to work?
metagenomics virome virmap written 25 days ago by susan.klein • 0 • updated 6 days ago by exon-k • 0
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EMBOSS predicting proteins
metagenomics emboss protein prediction written 9 days ago by MK2000 • 10 • updated 8 days ago by h.mon ♦ 22k
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Filtering and Trimming Metagenomic Data
metagenomics prinseq microbial fastqc written 27 days ago by MK2000 • 10 • updated 11 days ago by Biostar ♦♦ 20
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How To Bin Metagenomic Assembled Contigs Using Tetranucleotide Frequency
nucleotide metagenomics frequency written 6.6 years ago by Shuixia100 • 100 • updated 23 days ago by Biostar ♦♦ 20
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What is differential abundance analysis?
metagenomics binning abundance written 27 days ago by vijinim • 50 • updated 26 days ago by Noam Teyssier • 40
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Does MetaCyc or BioCyc have an equivalent of KEGG orthologs that could be blasted against locally?
metacyc orthologs biocyc humann2 metagenomics written 8 weeks ago by O.rka • 70 • updated 28 days ago by biouser • 20
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Forum: Metagenomics Tutoring Opportunity
metagenomics tutoring forum microbial written 29 days ago by MK2000 • 10 • updated 28 days ago by h.mon ♦ 22k
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Compare samples from bacterial genome
metagenomics deseq written 5 weeks ago by David • 120
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Questions about assembly of large metagenomics dataset
assembly metagenomics megahit bioinformatics written 5 weeks ago by zorrilla • 0
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Add taxonomy information of fileA to species list in fileB
metagenomics taxonomy written 6 weeks ago by mariep92 • 0 • updated 6 weeks ago by shenwei356 ♦ 4.4k
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Job: Postdoc & Scientist (New York City): Microbiome and Human Diseases
microbiome metagenomics metagenome long reads job written 4 months ago by fanggang • 60
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Binning of reads vs. binning of contigs in metagenomics
binning metagenomics written 7 weeks ago by vijinim • 50
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Kraken2 database curation
metagenomics kraken written 9 weeks ago by Asaf ♦ 5.0k
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Help with species level ID (L 7) in qiime
microbiome metagenomics otu written 9 weeks ago by lkw222 • 30
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samtools sort: legacy usage
genome metagenomics samtools sort written 10 weeks ago by c.e.chong • 0 • updated 10 weeks ago by h.mon ♦ 22k
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cd-hit-est total seq value doesn't match number of sequences being compared?
cd-hit-est metagenomics binning filtering cd-hit written 11 weeks ago by c.e.chong • 0
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Comparing two OTU tables
microbiome 16s microbiota metagenomics written 4 months ago by jeremieauger • 20 • updated 11 weeks ago by Biostar ♦♦ 20
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Which metagenomics tool works best?
genome assembly metagenomics alignment sequencing written 12 weeks ago by Seq225 • 80
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Extracted mapped shotgun metagenomic reads to reference genome. SPAdes or metaSPAdes for de-novo assembly?
de-novo assembly metagenomics written 3 months ago by O.rka • 70 • updated 3 months ago by h.mon ♦ 22k
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Can anyone point me in the direction of some raw BAM formatted bacterial PacBio data
metagenomics bam prokaryotes pacbio pbccs written 3 months ago by TEF • 0 • updated 3 months ago by genomax ♦ 60k
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Relative RNA abundance in Metatranscriptomes: how to normalize RNA abundance by DNA
metatranscriptomics metagenomics written 3 months ago by mossigstamboulian • 30
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Combined metagenomics-metatranscriptomics analysis
metatranscriptomics metagenomics written 5 months ago by bird77 • 20 • updated 3 months ago by Biostar ♦♦ 20
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Any published data with known percentage of virus sequences?
metagenomics next-gen written 3 months ago by novice • 870
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Tutorial: Classifying metagenomics sequences at species level using CLARK for bacterial metagenome
genome metagenomics ecology tutorial written 2.9 years ago by shilparaopradeep • 180 • updated 3 months ago by RamRS ♦ 20k
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