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<prev • 478 results • page 1 of 16 • next >
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Why are there soo many hits when using KOFAMSCAN?
annotation metagenomics protein written 23 hours ago by O.rka • 230 • updated 18 hours ago by Mensur Dlakic • 8.1k
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K-mer usage in metagenome assemblies
k-mer assembly metagenomics written 6 days ago by v.berriosfarias • 10 • updated 5 days ago by Rayan Chikhi • 1.5k
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News: ONLINE TRAINING: Environmental Metagenomics
assembly metagenomics news nanopore illumina written 12 days ago by carlopecoraro2 • 1.9k
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Is it normal that nearly all of p-value is equal to 0.1 in PERMANOVA analysis
metagenomics permanova statistics written 12 months ago by zhangdengwei • 130 • updated 22 days ago by dqq102829 • 0
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Where can get processed metagenome datasets?
metagenomics meta-genome sequencing written 24 days ago by m.koohi.m • 120
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Combining prodigal for metagenomics and transdecoder for metatranscriptomics in same dataset?
metatranscriptomics metagenomics orf calling written 5 weeks ago by O.rka • 230
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109
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Metagenomics - Functional analysis
metagenomics megan written 7 weeks ago by lagartija • 90
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1
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118
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1
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Embedding Metagenomics Tools onto a Website
bacteria metagenomics alignment fungi sequencing written 7 weeks ago by stelaanag • 0 • updated 7 weeks ago by Jean-Karim Heriche ♦ 24k
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Can I use metatranscriptomic reads for coverage when doing metagenomic binning?
metatranscriptomics metagenomics binning written 8 weeks ago by O.rka • 230 • updated 8 weeks ago by Mensur Dlakic • 8.1k
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270
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2
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Potential Bacteria Contamination - RNA-Seq
metagenomics rna-seq written 5 months ago by VHahaut • 1.1k • updated 9 weeks ago by Thind amarinder • 110
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133
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Remove certain species from standard database of Kraken
16s bracken kraken metagenomics rna-seq written 10 weeks ago by snishtala03 • 40 • updated 9 weeks ago by Biostar ♦♦ 20
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Preparing 16S gene amplicon (metagenomic) sequencing data for submission to ENA
16s sequencing metagenomics ena written 10 weeks ago by lyonskvn • 0 • updated 10 weeks ago by antonioggsousa • 1.9k
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Job: Associate Principal Investigator, Bioinformatics (1604)
next-generation sequencing metagenomics job written 3 months ago by tonya.stefanic • 70
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271
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5 follow
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viral metagenomics classification: MINIMUM number of viral reads (cutoff) to consider a sample positive
metagenomics classification ngs written 3 months ago by Mania • 0
1
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1
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157
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1
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memory allocation in metaSpades
assembly metagenomics spades ram written 3 months ago by Maorkn • 0 • updated 3 months ago by GenoMax ♦ 94k
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148
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antismash 5.0 (New region concept) - counting BGCs
metagenomics antismash written 3 months ago by arshad1292 • 40
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Counting Biosyntheic Gene Clusters (BGC) types from Antismash Output
metagenomics antismash written 3 months ago by arshad1292 • 40
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6 follow
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Open Source Sequence Assembly Programs
software assembly metagenomics open written 10.1 years ago by Monzoor • 300 • updated 3 months ago by Biostar ♦♦ 20
2
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1
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161
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mapping to incomplete reference
bowtie2 metagenomics alignment mapping written 3 months ago by issia • 0 • updated 3 months ago by GenoMax ♦ 94k
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155
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How to normalize between samples in WGS metagenomics
normalization metagenomics shotgun metagenomics written 3 months ago by plicht • 0
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170
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Performing so-called "SNP confirmation" for reads assigned to their corresponding Antibiotic Resistance Genes (ARGs): suggestions?
arg reads metagenomics snp megares written 4 months ago by Macspider • 3.3k • updated 3 months ago by Biostar ♦♦ 20
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Job: PostDoc position at Human Genome Sequencing Center @ Baylor College of Medicine, Houston, TX, USA
bioinformatics metagenomics job postdoc written 4 months ago by Medhat ♦ 8.8k
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5 follow
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Tools for metagenomics classification using long reads
metagenomics alignment sequen written 2.7 years ago by Medhat ♦ 8.8k • updated 4 months ago by bioinfo17 • 30
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196
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What are the input files for lwaldron / metaphlanToPhyloseq.R ?
R metagenomics metaphlan written 4 months ago by c.e.chong • 40 • updated 4 months ago by zorbax • 230
1
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273
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Taxonomic classification of MAGs
genome metagenomics taxonomy binning written 5 months ago by c.e.chong • 40 • updated 5 months ago by Mensur Dlakic • 8.1k
2
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1
answer
190
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1
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What does "assembly-level" classification mean?
classifier classification metagenomics written 5 months ago by psun • 0 • updated 5 months ago by h.mon ♦ 32k
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2
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Good Books/Resources to learn metagenomic analysis?
assembly metagenomics bacteria long reads nanopore written 5 months ago by jimpinney • 10 • updated 5 months ago by Mensur Dlakic • 8.1k
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Tools for metagenomic binning for viruses?
viruses metagenomics rna-seq genomics written 5 months ago by jaydu • 0 • updated 5 months ago by Mensur Dlakic • 8.1k
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Is there a database or catalog of the proteins secreted through the Type 3 Secretion System available?
metagenomics microbiology written 5 months ago by Vincent Laufer • 1.1k
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How to generate Beta diversity boxplot from phyloseq object?
metagenomics beta diversity phyloseq written 5 months ago by dpc • 150
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