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michigan • reset
Recent Votes
- C: samtools filter proper paired alignment
- C: Is blacklisted regions filtering in ChIP-seq still needed? (let's talk about the
- C: Is blacklisted regions filtering in ChIP-seq still needed? (let's talk about the
- A: Genomic Coverage - Samtool's undocumented "depth" verses the poorly documented p
- C: How to get proteins from GFF file resulted from MAKER annotation
- C: How to get proteins from GFF file resulted from MAKER annotation
- A: How to exclude some of breast cancer subtypes just by looking at gene expressio
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Recent Replies
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C: Module merging WGCNA by
Kevin Blighe ♦ 37k
Check the output of each and every command that you have used so that you can understand how the ...
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C: Changing FASTQ format from sense to antisense by
genomax ♦ 62k
> Slam dunk software is resulting in a failed run without a very useful > error Without th...
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A: How to study gene expression network? by
Kevin Blighe ♦ 37k
> I've read some papers that employ machine learning methods to analyse > gene expression n...
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C: Changing FASTQ format from sense to antisense by
Carambakaracho • 750
Dear miyagi, welcome on Biostars. I admit, I fail on this formating, too. Please use the code but...
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A: A problem with MEGA-X tool for select the columns of nucleotides and edit them by
MAD • 0
Having the same issue. Opened up MEGA 7 and accessed MEGA 7 alignments; no problem trimming align...
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C: A large list of chromossome by
1996luanabianca • 0
i will look. Thanks very much!!!!
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C: Number of discovered genes in genome does not correspond with published annotati by
vkkodali • 930
What is this supposed to do? Please explain.
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C: How to get proteins from GFF file resulted from MAKER annotation by
imda • 0
I already have used both scripts, and the script from GAAS is terrific, I got a lot of informatio...
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A: Number of discovered genes in genome does not correspond with published annotati by
kashifalikhan007 • 50
**Full information of your GFF file** awk '{print$3}' | sort | uniq -c your.gff
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A: Convert Fasta format to MEME-motif format by
kashifalikhan007 • 50
**Full FIMO Pipeline Step** fasta-get-markov sequences.fasta > sequences.bg mkdir tem...
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A: PanCanAtlas EBPlusPlus-corrected RNA-seq TCGA dataset by
rahul.kulshrestha97 • 0
Hi, I am making a deep learning based multicategory tumor classification project, for which I hav...
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C: Identify adapter sequences for trimming from Illumina paired end fastq files by
mohammedtoufiq91 • 0
Thank you. I ran this program, however, did not find any specific adapter. ./fastp -i -I -o R...
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