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<prev • 90 results • page 1 of 3 • next >
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miRDeep2 sample read count different between mapper.pl and quantifier.pl
mirdeep2 rna-seq microrna written 6 weeks ago by sg197 • 20
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3
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138
views
3
answers
miRDeep2 problem with reads_collapsed.fa
microrna mirdeep2 rna-seq written 9 weeks ago by LynxLynx • 0 • updated 7 weeks ago by di.wang1 • 0
3
votes
1
answer
190
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1
answer
microRNA-seq analysis from RNA-seq data
small rna rna-seq microrna long non-coding rna written 4 months ago by seta • 1.3k • updated 4 months ago by rob.costa1234 • 250
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153
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Conversion of human miRBase Accession/Name/Sequence to murine
mirbase microrna written 6 months ago by katie.connor • 0
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0
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514
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Identifying pri-microRNA sequence from microRNA sequence
rna-seq microrna written 21 months ago by anand.gururajan • 0 • updated 6 months ago by Biostar ♦♦ 20
2
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1
answer
284
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1
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How to quantify novel microRNA read counts for each sample from miRDeep2
readcounts novel mirdeep2 microrna rna-seq written 10 months ago by sri.dewi • 0 • updated 8 months ago by zarskili • 20
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1
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2.4k
views
1
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randfold-2.0.1 installation problem
microrna mirdeep2 written 4.2 years ago by chipseq33 • 10 • updated 10 months ago by h.mon ♦ 30k
0
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1
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228
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1
answer
The number of peaks in microRNA-Seq trimmed data
rna-seq microrna written 13 months ago by wangdp123 • 240 • updated 13 months ago by jperezboza • 10
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293
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Testing for enrichment between two weighted ranked lists
R rna-seq microrna enrichment analysis gsea written 13 months ago by PeterA • 0
7
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417
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9 follow
0
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fastq dump usage of microRNA-seq data
fastq rna-seq microrna written 14 months ago by K.patel5 • 30
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0
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228
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0
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Identify and separate Micronas from my raw data.
rna-seq microrna mirna written 15 months ago by sabaghianamir70 • 10
1
vote
0
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751
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0
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Running mirdeep2 mapper.pl problems
mirdeep2 rna-seq microrna written 16 months ago by lachlan.gray95 • 0 • updated 16 months ago by h.mon ♦ 30k
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536
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Job: Post-doctoral fellowship in microRNA systems biology
bioinformatics data analysis job microrna written 17 months ago by laurent.guyon • 40
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2
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964
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2
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Are there good reference for miRNA microRNA pathway analysis in R following edgeR run?
pathway analysis microrna mirna written 2.4 years ago by Björn • 40 • updated 17 months ago by brianj.park • 50
0
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1
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406
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1
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miRDeep2 - same micro seq but different coordinates
microrna mirdeep2 mirna written 17 months ago by klimek.magda • 0 • updated 17 months ago by h.mon ♦ 30k
2
votes
1
answer
318
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1
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Predicting targets from 3-UTR of novel splice variants
3utr microrna splice variant written 18 months ago by sayantanibhowmik15 • 0 • updated 18 months ago by Erin_Ensembl • 410
1
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0
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323
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Annotation database for plant microrna
annotation database microrna written 20 months ago by hasani.iut6 • 40
0
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1
answer
391
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1
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Tools to predict microRNAs in Ascomycota(Fungus)
smallrna rna-seq microrna written 21 months ago by MAPK • 1.6k • updated 21 months ago by Buffo • 1.8k
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0
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751
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0
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Identifying 5p and 3p in miRNA isoform expression data from TCGA for feature selection
data processing tcga microrna isoform mirna written 21 months ago by jiaqiwu • 0
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0
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473
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Generating read counts for my microRNA reads for a non model invertebrate
htseq small rna read count microrna written 22 months ago by karthic • 100
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4
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1.3k
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4
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Job: Post-doctoral fellowship in microRNA systems biology, Grenoble, France
systems biology data mining job microrna written 2.1 years ago by laurent.guyon • 40
1
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816
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How to get count matrix from aligned file
dea countmatrix rna-seq microrna written 24 months ago by JulianC • 10
2
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2
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1.4k
views
2
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gene ontology for olive flounder
gene non-model organism microrna gene-ontology written 4.7 years ago by najibveto • 0 • updated 24 months ago by Michael Dondrup ♦ 47k
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651
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count and compare microRNA expression value in RNA-Seq data on Galaxy
fastq galaxy rna-seq microrna dge written 2.2 years ago by lkianmehr • 50
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4
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8 follow
4
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Small RNA-seq experimental design, pooling samples or not ? which one is better?
pooling small rna-seq mirna-seq microrna rna-seq written 3.3 years ago by CandiceChuDVM • 2.1k • updated 2.2 years ago by BIOTECH.DEEPTI911 • 10
4
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2.0k
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5 follow
0
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Tool: CircTools: Softwares for Discovering circRNA-microRNA Interactions from CLIP-Seq Datasets
circrna microrna interactome rna-seq clip-seq tool written 2.3 years ago by lsp03yjh • 800
1
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1.3k
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Tool: mirDIP 4.1 - integrative database of human microRNA target predictions
targets mirna tool microrna interactome written 2.2 years ago by tomastokar • 30
6
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1.1k
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6 follow
2
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MicroRNA-target interactions databases
interaction microrna target written 2.2 years ago by Joe Kherery • 100 • updated 2.2 years ago by Björn • 40
0
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509
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0
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RNAhybrid for target gene of plant miRNAs?
miranda rna22 rnahybrid microrna mirna written 2.3 years ago by Shabazz • 0
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1.4k
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0
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Convert miRNA names to Entrez Gene ID
R bioconductor microrna written 2.7 years ago by akastrin • 0 • updated 2.5 years ago by Biostar ♦♦ 20
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