Latest
Open
RNA-Seq
ChIP-Seq
SNP
Assembly
Tutorials
Tools
Jobs
Forum
Planet
All »
Home
Log In
Showing: minfi • reset
or   Classic search
<prev • 28 results • page 1 of 1 • next >
3
votes
1
answer
101
views
1
answer
Reading methylation without IDAT files downloaded from GEO
geo methylation minfi gene expression omnibus written 4 days ago by halo22 • 110 • updated 3 days ago by Charles Warden ♦ 5.5k
0
votes
0
answers
122
views
0
answers
Error using preprocessNoob (minfi) for processing of Illumina array data
array illumina preprocessnoob minfi written 11 weeks ago by steffanchristiansen • 0
0
votes
0
answers
231
views
0
answers
Interpretation of control strip and beta density plots for Illumina methylation array data using minFi
R minfi illumina epic methylation array written 3 months ago by sichan • 60
1
vote
0
answers
226
views
0
answers
Convert "minfi::RGChannelSet" class from OLD to NEW
rgchannelset minfi summarizedexperiment written 9 months ago by Tanvir Ahamed • 270
0
votes
0
answers
359
views
0
answers
Minfi probe filtering
p-value R tools minfi written 11 months ago by niutster • 80
0
votes
1
answer
333
views
1
answer
' The cancer type is not available for this platform.' error using tcgaR package to download DNA methylation data
methylation tcga minfi tcgar written 12 months ago by mohamedrefaat.1.1992 • 0
0
votes
1
answer
779
views
1
answer
Working with Differentially Methylated Regions(DMRs)
dna methylation tcga dmrs minfi written 12 months ago by noorpratap.singh • 110 • updated 12 months ago by Kevin Blighe ♦ 30k
0
votes
1
answer
767
views
1
answer
categorize DMRs by type (hyper - hypo methilated) in DMRcate or minfi
450k dmrcate hypo mehylated minfi hyper methylated written 17 months ago by rahel14350 • 20
0
votes
0
answers
414
views
0
answers
Error when changing the database for minfi dropLociWithSnps
methylationepic minfi illumina snp methylation written 15 months ago by Ellen O • 10
7
votes
2
answers
1.1k
views
2
answers
Require review/comments/suggestions on 450k analysis college project
450k methylation minfi cohcap champ written 3.5 years ago by arpit.singh1203 • 60 • updated 16 months ago by allayza_cute • 0
0
votes
1
answer
585
views
1
answer
Density plot parameters in minfi package
minfi density parameter density plot written 16 months ago by niutster • 80 • updated 16 months ago by theobroma22 • 1.1k
0
votes
0
answers
478
views
0
answers
Error in new version of minfi
software error reading file minfi written 16 months ago by niutster • 80
2
votes
1
answer
1.1k
views
1
answer
minfi pre-processing and normalization
R minfi pre-processing bead-count normalization written 16 months ago by niutster • 80 • updated 16 months ago by andrew.j.skelton73 ♦ 5.3k
0
votes
0
answers
565
views
0
answers
Minfi bumphunter -value column
bumphunter R minfi written 17 months ago by antmantras • 0
3
votes
1
answer
718
views
1
answer
visualization of DMRcate or minfi output on UCSC
450k dmrcate track hub minfi ucsc written 17 months ago by rahel14350 • 20 • updated 17 months ago by asyavuz • 130
1
vote
0
answers
798
views
0
answers
how to do noob+funnorm+bmiq normalization together in minfi or RnBeads?
450k preprocessfunnorm bmiq rnbeads minfi written 18 months ago by rahel14350 • 20
0
votes
0
answers
561
views
0
answers
DNA methylation 450k data - minfi - preprocessFunnorm - CNV cases vs non-CNV controls
450k dna methylation minfi cnv preprocessfunnorm written 18 months ago by Thomas • 0
0
votes
0
answers
704
views
0
answers
Obtaining beads number from MethylSet (minfi)
450k minfi methylation illumina R written 2.1 years ago by ciemanek • 100
1
vote
0
answers
1.1k
views
0
answers
How to apply preprocessing methods from minfi package on an output file from Genome studio
450k R methylation minfi written 2.2 years ago by halldorbjarni • 10
2
votes
1
answer
743
views
1
answer
identify associated genes with methylation bumps
methylation minfi illumina epic rnbeads champ written 2.3 years ago by weixiaokuan • 80 • updated 2.3 years ago by igor ♦ 6.8k
10
votes
0
answers
3.2k
views
0
answers
illumina EPIC array support by R packages?
methylation minfi rnbeads champ written 2.3 years ago by weixiaokuan • 80
0
votes
0
answers
698
views
0
answers
"RGChannelSet" constructor function in minfi package
450k bioconductor minfi written 2.5 years ago by Tanvir Ahamed • 270 • updated 2.5 years ago by Biostar ♦♦ 20
0
votes
0
answers
894
views
0
answers
minfi: delete NA values from RGChannelSet
R minfi written 2.6 years ago by philipp24 • 0 • updated 2.6 years ago by PoGibas ♦ 4.7k
0
votes
0
answers
948
views
0
answers
Error processing Illumina 450K Methylation data using Minfi
minfi bioconductor methylation R written 2.8 years ago by pm2012 • 80
7
votes
2
answers
1.1k
views
2
answers
Memory allocation problems in 450k analysis
R minfi methylation champ written 3.6 years ago by arpit.singh1203 • 60 • updated 3.1 years ago by Shicheng Guo • 6.9k
11
votes
1
answer
1.6k
views
1
answer
Approaches for normalisation of Illumina 450k data with large global differences in methylation
450k minfi methylation written 3.3 years ago by phil.chapman • 70 • updated 3.3 years ago by fortin946 • 180
0
votes
0
answers
955
views
0
answers
Tool: minfi package: plotBetasByType, GenomicRatioSet-clas
450k minfi methylation tool illumina written 3.6 years ago by kawaguca • 0
5
votes
2
answers
2.8k
views
2
answers
Infinium/Illumina 450K methylation array data analysis: How to compare the various packages/pipelines?
methylation minfi cohcap rnbeads champ written 3.7 years ago by arpit.singh1203 • 60 • updated 3.7 years ago by Charles Warden ♦ 5.5k
<prev • 28 results • page 1 of 1 • next >
Recent Votes
Recent Locations • All »
  • United Kingdom, just now
  • Beijing, 10 minutes ago
  • United States, 15 minutes ago
Recent Awards • All »
Recent Replies
Content
Help
Access
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.3.0
Traffic: 684 users visited in the last hour