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<prev • 33 results • page 1 of 2 • next >
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309
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bumphunter for 3 (or more) groups
bumphunter methylation epic array minfi dmr written 7 months ago by alfonsosaera • 0 • updated 17 days ago by Biostar ♦♦ 20
12
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2
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4.6k
views
2
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illumina EPIC array support by R packages?
methylation minfi rnbeads champ written 3.4 years ago by weixiaokuan • 90 • updated 4 months ago by Charles Warden ♦ 7.4k
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1
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197
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1
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Why does minfi impute actual values in place of NULL values when normalizing methylation data?
probes minfi null methylation R written 5 months ago by sbdejene • 0
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1
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299
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1
answer
How to export with minfi quantile normalized preprocessed 850K methylation data?
R methylation quantile minfi normalization written 6 months ago by sbdejene • 0
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457
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Job: PhD Opportunity - Epigenomics of multiple sclerosis
methylation epigenetics minfi job written 9 months ago by rodney.lea • 20
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374
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Probe filtering beta-values from rgSet
R cpgs dnamarray minfi rgset written 9 months ago by moldach • 130
3
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1
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769
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1
answer
Reading methylation without IDAT files downloaded from GEO
geo methylation minfi gene expression omnibus written 13 months ago by halo22 • 130 • updated 13 months ago by Charles Warden ♦ 7.4k
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441
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Error using preprocessNoob (minfi) for processing of Illumina array data
array illumina preprocessnoob minfi written 15 months ago by steffanchristiansen • 0
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760
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Interpretation of control strip and beta density plots for Illumina methylation array data using minFi
R minfi illumina epic methylation array written 16 months ago by sichan • 80
1
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0
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548
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Convert "minfi::RGChannelSet" class from OLD to NEW
rgchannelset minfi summarizedexperiment written 22 months ago by Tanvir Ahamed • 290
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0
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678
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0
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Minfi probe filtering
p-value R tools minfi written 24 months ago by niutster • 80
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1
answer
564
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1
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' The cancer type is not available for this platform.' error using tcgaR package to download DNA methylation data
methylation tcga minfi tcgar written 2.1 years ago by mohamedrefaat.1.1992 • 0
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1
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1.5k
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1
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Working with Differentially Methylated Regions(DMRs)
dna methylation tcga dmrs minfi written 2.1 years ago by noorpratap.singh • 280 • updated 2.1 years ago by Kevin Blighe ♦ 51k
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1
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1.4k
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1
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categorize DMRs by type (hyper - hypo methilated) in DMRcate or minfi
450k dmrcate hypo mehylated minfi hyper methylated written 2.5 years ago by rahel14350 • 30
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634
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Error when changing the database for minfi dropLociWithSnps
methylationepic minfi illumina snp methylation written 2.4 years ago by Ellen O • 10
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2
answers
1.3k
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2
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Require review/comments/suggestions on 450k analysis college project
450k methylation minfi cohcap champ written 4.6 years ago by arpit.singh1203 • 60 • updated 2.4 years ago by allayza_cute • 0
0
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1
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932
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1
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Density plot parameters in minfi package
minfi density parameter density plot written 2.4 years ago by niutster • 80 • updated 2.4 years ago by theobroma22 • 1.1k
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724
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Error in new version of minfi
software error reading file minfi written 2.4 years ago by niutster • 80
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1
answer
2.0k
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1
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minfi pre-processing and normalization
R minfi pre-processing bead-count normalization written 2.4 years ago by niutster • 80 • updated 2.4 years ago by andrew.j.skelton73 ♦ 5.8k
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903
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Minfi bumphunter -value column
bumphunter R minfi written 2.5 years ago by antmantras • 0
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1
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1.0k
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1
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visualization of DMRcate or minfi output on UCSC
450k dmrcate track hub minfi ucsc written 2.5 years ago by rahel14350 • 30 • updated 2.5 years ago by asyavuz • 130
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0
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1.2k
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how to do noob+funnorm+bmiq normalization together in minfi or RnBeads?
450k preprocessfunnorm bmiq rnbeads minfi written 2.6 years ago by rahel14350 • 30
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935
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DNA methylation 450k data - minfi - preprocessFunnorm - CNV cases vs non-CNV controls
450k dna methylation minfi cnv preprocessfunnorm written 2.6 years ago by Thomas • 0
0
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920
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Obtaining beads number from MethylSet (minfi)
450k minfi methylation illumina R written 3.2 years ago by ciemanek • 130
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1.5k
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How to apply preprocessing methods from minfi package on an output file from Genome studio
450k R methylation minfi written 3.3 years ago by halldorbjarni • 10
2
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1
answer
1.1k
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1
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identify associated genes with methylation bumps
methylation minfi illumina epic rnbeads champ written 3.4 years ago by weixiaokuan • 90 • updated 3.4 years ago by igor ♦ 8.8k
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0
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877
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0
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"RGChannelSet" constructor function in minfi package
450k bioconductor minfi written 3.6 years ago by Tanvir Ahamed • 290 • updated 3.5 years ago by Biostar ♦♦ 20
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1.2k
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minfi: delete NA values from RGChannelSet
R minfi written 3.7 years ago by philipp24 • 0 • updated 3.7 years ago by PoGibas ♦ 4.8k
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1.3k
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Error processing Illumina 450K Methylation data using Minfi
minfi bioconductor methylation R written 3.9 years ago by pm2012 • 80
7
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2
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1.3k
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2
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Memory allocation problems in 450k analysis
R minfi methylation champ written 4.6 years ago by arpit.singh1203 • 60 • updated 4.2 years ago by Shicheng Guo • 7.8k
<prev • 33 results • page 1 of 2 • next >
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