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<prev • 27 results • page 1 of 1 • next >
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Error using preprocessNoob (minfi) for processing of Illumina array data
array illumina preprocessnoob minfi written 17 days ago by steffanchristiansen • 0
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126
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Interpretation of control strip and beta density plots for Illumina methylation array data using minFi
R minfi illumina epic methylation array written 4 weeks ago by sichan • 60
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185
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Convert "minfi::RGChannelSet" class from OLD to NEW
rgchannelset minfi summarizedexperiment written 7 months ago by Tanvir Ahamed • 270
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313
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Minfi probe filtering
p-value R tools minfi written 8 months ago by niutster • 70
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1
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305
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1
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' The cancer type is not available for this platform.' error using tcgaR package to download DNA methylation data
methylation tcga minfi tcgar written 10 months ago by mohamedrefaat.1.1992 • 0
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1
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626
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1
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Working with Differentially Methylated Regions(DMRs)
dna methylation tcga dmrs minfi written 10 months ago by noorpratap.singh • 110 • updated 10 months ago by Kevin Blighe ♦ 25k
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1
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648
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1
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categorize DMRs by type (hyper - hypo methilated) in DMRcate or minfi
450k dmrcate hypo mehylated minfi hyper methylated written 15 months ago by rahel14350 • 20
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379
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Error when changing the database for minfi dropLociWithSnps
methylationepic minfi illumina snp methylation written 13 months ago by Ellen O • 10
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2
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1.1k
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2
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Require review/comments/suggestions on 450k analysis college project
450k methylation minfi cohcap champ written 3.4 years ago by arpit.singh1203 • 60 • updated 14 months ago by allayza_cute • 0
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1
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538
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1
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Density plot parameters in minfi package
minfi density parameter density plot written 14 months ago by niutster • 70 • updated 14 months ago by theobroma22 • 1.1k
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432
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Error in new version of minfi
software error reading file minfi written 14 months ago by niutster • 70
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1
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986
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1
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minfi pre-processing and normalization
R minfi pre-processing bead-count normalization written 14 months ago by niutster • 70 • updated 14 months ago by andrew.j.skelton73 ♦ 5.2k
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512
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Minfi bumphunter -value column
bumphunter R minfi written 15 months ago by antmantras • 0
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1
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672
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1
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visualization of DMRcate or minfi output on UCSC
450k dmrcate track hub minfi ucsc written 15 months ago by rahel14350 • 20 • updated 15 months ago by asyavuz • 130
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722
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how to do noob+funnorm+bmiq normalization together in minfi or RnBeads?
450k preprocessfunnorm bmiq rnbeads minfi written 16 months ago by rahel14350 • 20
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505
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DNA methylation 450k data - minfi - preprocessFunnorm - CNV cases vs non-CNV controls
450k dna methylation minfi cnv preprocessfunnorm written 16 months ago by Thomas • 0
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659
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Obtaining beads number from MethylSet (minfi)
450k minfi methylation illumina R written 23 months ago by ciemanek • 100
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974
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How to apply preprocessing methods from minfi package on an output file from Genome studio
450k R methylation minfi written 2.0 years ago by halldorbjarni • 10
2
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1
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705
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1
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identify associated genes with methylation bumps
methylation minfi illumina epic rnbeads champ written 2.1 years ago by weixiaokuan • 80 • updated 2.1 years ago by igor ♦ 6.5k
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2.9k
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illumina EPIC array support by R packages?
methylation minfi rnbeads champ written 2.2 years ago by weixiaokuan • 80
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665
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"RGChannelSet" constructor function in minfi package
450k bioconductor minfi written 2.4 years ago by Tanvir Ahamed • 270 • updated 2.3 years ago by Biostar ♦♦ 20
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860
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minfi: delete NA values from RGChannelSet
R minfi written 2.4 years ago by philipp24 • 0 • updated 2.4 years ago by PoGibas ♦ 4.7k
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906
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Error processing Illumina 450K Methylation data using Minfi
minfi bioconductor methylation R written 2.6 years ago by pm2012 • 80
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2
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1.1k
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2
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Memory allocation problems in 450k analysis
R minfi methylation champ written 3.4 years ago by arpit.singh1203 • 60 • updated 2.9 years ago by Shicheng Guo • 6.1k
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1.6k
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1
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Approaches for normalisation of Illumina 450k data with large global differences in methylation
450k minfi methylation written 3.1 years ago by phil.chapman • 70 • updated 3.1 years ago by fortin946 • 180
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918
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Tool: minfi package: plotBetasByType, GenomicRatioSet-clas
450k minfi methylation tool illumina written 3.4 years ago by kawaguca • 0
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2
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Infinium/Illumina 450K methylation array data analysis: How to compare the various packages/pipelines?
methylation minfi cohcap rnbeads champ written 3.5 years ago by arpit.singh1203 • 60 • updated 3.5 years ago by Charles Warden ♦ 5.1k
<prev • 27 results • page 1 of 1 • next >
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