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2
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195
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5 follow
1
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bowtie (1) 0% alignment on paired-end RNAseq data
alignment bowtie rna-seq mirna written 3 days ago by gulamaltab • 0 • updated 3 days ago by ATpoint ♦ 15k
0
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0
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72
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0
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Correlating miRNA count from DeSEQ2 with Transcript FPKM from cuffdiff
cuffdiif normalization deseq2 transcript mirna written 3 days ago by arisarkar88 • 0
19
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4
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1.7k
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4
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mireap procedure short tutorial
mireap mirna written 2.6 years ago by F • 3.4k • updated 10 days ago by b.d237 • 100
0
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0
answers
70
views
0
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Is it possible to do differential analyis on mirdeep2 outcome?
differential analysis mirdeep rna-seq mirna written 11 days ago by gulamaltab • 0
0
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0
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69
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Mirdeep2 novel miRNA mature coordinates differing
novelgenes novelmirna rna-seq mirdeep2 mirna written 11 days ago by gulamaltab • 0
4
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0
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364
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6 follow
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Tool: Deciphering LncRNA-Target, NcRNA-Target, Pseudogene-Target and mRNA-Target Interactions from RNA Interactome Sequencing Data
lncrna mirna rna interactome tool interactome written 4 months ago by lsp03yjh • 750
1
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1
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124
views
1
answer
Affymetrix miRNA 4.0 Normalization
microarray mirna written 22 days ago by gracie • 10
2
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1
answer
143
views
1
answer
Oligo: GeneChip miRNA 4.0 analysis only returns control probes
R oligo mirna written 6 weeks ago by Keiron O'Shea • 10 • updated 25 days ago by iraia.munoa • 60
1
vote
1
answer
118
views
1
answer
MiRdeep2 for paired-end RNA-seq?
paired-end novel rna-seq mirdeep2 mirna written 29 days ago by gulamaltab • 0
0
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2
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435
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2
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Are there good reference for miRNA microRNA pathway analysis in R following edgeR run?
pathway analysis microrna mirna written 13 months ago by Björn • 40 • updated 4 weeks ago by brianj.park • 0
0
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1
answer
109
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1
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miRDeep2 - same micro seq but different coordinates
microrna mirdeep2 mirna written 4 weeks ago by klimek.magda • 0 • updated 4 weeks ago by h.mon ♦ 24k
0
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0
answers
90
views
0
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How to create alignment of UTR's for use in TargetScan?
targetscan mirna written 5 weeks ago by jon.brate • 200
7
votes
5
answers
241
views
8 follow
5
answers
miRNA differential expression
de deseq2 rna-seq mirna written 6 weeks ago by anshulmbi • 0
2
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3
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4.9k
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5 follow
3
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Mirna Predictions In Plants
plant prediction mirna written 6.8 years ago by vandanabioinfo23 • 0 • updated 7 weeks ago by Biostar ♦♦ 20
0
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1
answer
113
views
1
answer
Batch effect removal on q-RT PCR microRNA expression data
batcheffect R mirna taqman pcr written 8 weeks ago by ivna.ivankovic • 0 • updated 8 weeks ago by Kevin Blighe ♦ 41k
0
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2
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309
views
2
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novel miRNA identification from sequence
mirna written 4 months ago by JulianC • 10 • updated 12 weeks ago by v82masae • 120
0
votes
0
answers
192
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0
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Result interpretation of mircat tool
srna-workbench mircat mirna. mirna written 4 months ago by debasishbk • 0 • updated 12 weeks ago by Biostar ♦♦ 20
1
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1
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1.1k
views
1
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microRNA microarray or small RNASeq
mouse rna-seq mirna written 2.8 years ago by MANISH RANJAN • 40 • updated 3 months ago by Biostar ♦♦ 20
1
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1
answer
471
views
1
answer
miRNA with UMI - any papers showing this improves accuracy?
umi mirna written 10 months ago by Richard • 550 • updated 3 months ago by Rituriya • 20
0
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0
answers
203
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0
answers
mirdeep2: UMI information lost when reads are collapsed
umi mirdeep2 mirna written 3 months ago by Rituriya • 20
0
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0
answers
200
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0
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target gene selection for miRNA
target genes mirna written 3 months ago by anjuraas • 10
1
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0
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304
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0
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Job: Bioinformatician position: RNA regulatory networks, NYC
3'-seq apa job rna-seq clip-seq mirna written 4 months ago by laie • 10
4
votes
1
answer
225
views
1
answer
Retrieving miRNA data from Firehose by using RTCGAToolbox
firehose mirna rtcgatoolbox R written 4 months ago by dodausp • 110 • updated 4 months ago by zx8754 ♦ 7.1k
4
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1
answer
2.8k
views
1
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microRNA- sequencing analysis
mirna written 3.0 years ago by kanwarjag • 950 • updated 4 months ago by Biostar ♦♦ 20
0
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1
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933
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1
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miRNA Target Site prediction from unpaired data
mrna rna-seq mirna written 3.1 years ago by hAjmal • 30 • updated 4 months ago by Biostar ♦♦ 20
0
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0
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305
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0
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miRNA mRNA interaction studies
mrna interaction deseq2 mirna written 4 months ago by anjuraas • 10
1
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1
answer
879
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1
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non-coding RNAs target predictions
target prediction ncrna mirna written 18 months ago by Leite • 370 • updated 4 months ago by lsp03yjh • 750
0
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0
answers
172
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0
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Forum: Tool for miRNA target prediction and translation from mouse to human?
genome forum tranlation from mouse to human tool mirna written 4 months ago by passi.g • 0
0
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0
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223
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0
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Problem with miRDeep2.pl
next-gen mirdeep2 mirna written 4 months ago by JulianC • 10
0
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0
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145
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0
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synergism in miRNA
fischer exact test R mirna written 4 months ago by praveenhcu131 • 0
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