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<prev • 323 results • page 1 of 11 • next >
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Tool: oncoNcRNA: Exploring the lncRNAs and miRNAs with Oncogenic Potentials from TCGA and CCLE cancer samples
tool cancer tcga ccle mirna lncrna written 4 months ago by lsp03yjh • 450
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Reads mapping to mir21a in mir-21 Knock-Out mice
htseq bowtie mirna written 7 days ago by gkuffel22 • 20
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Tool: Transcription Factor Binding Sites, Motifs and Profiles from ~10200 ChIP-seq and TCGA datasets
transcription factor lncrna chip-seq tool mirna written 8 months ago by lsp03yjh • 450
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19 follow
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Microrna Pipeline
mirna written 3.3 years ago by xiaojuhu13 • 140 • updated 14 days ago by k.kathirvel93 • 30
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106
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Use blastn to predict miRNA
new mirna conserved mirna blastn mirna written 23 days ago by MeiNB • 10
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79
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MiRNA orthologues between human and chick
orthologues microrna mirna written 4 weeks ago by fana • 0
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105
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Normalize miRNA expression matrix from reads count table
mirna written 5 weeks ago by landscape95 • 30
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132
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Create gene expression matrix from miRNA
mirna written 5 weeks ago by landscape95 • 30 • updated 5 weeks ago by Radek • 820
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Blog: Podcast: miRNA target site prediction with Antonio Marco
podcast blog mirna written 5 weeks ago by roma • 90
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148
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Mapping miRNA with Bowtie & Bowtie2
bowtie2 mapping bowtie mirna written 5 weeks ago by gkuffel22 • 20
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Use of miARma-seq to quantify miRNA
miarma-seq smallrna mirna written 6 weeks ago by Chynoki • 0
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163
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1
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Extracting two matched columns from a file
R mirna written 7 weeks ago by F • 2.6k • updated 7 weeks ago by theobroma22 • 690
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137
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miRDeep2, error with quantifier.pl
quantifier.pl mirdeep2 smallrna-seq mirna written 8 weeks ago by Chynoki • 0
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679
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Unique human miRNAs
unique sequence alignment human mirna written 2.4 years ago by tea.berulava • 0 • updated 8 weeks ago by Bioaln • 150
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1
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133
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1
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miRNA alignment to cDNA data
rna-seq mirna written 8 weeks ago by tshmes • 10 • updated 8 weeks ago by Buffo • 460
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Exact docking process for mrna cleavage by micrornas
mrna mirna written 9 weeks ago by bhagyashreemohanty0 • 0
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163
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Standard fold enrichment cut-off/threshold in functional enrichment analysis?
biological pathways enrichment analysis mirna written 9 weeks ago by jjust8200 • 0
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152
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co-expression of miRNA-mRNA in cancer
mirna cancer written 10 weeks ago by F • 2.6k
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104
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Target site position in miRecords
mirecords mirna written 11 weeks ago by Emad • 0
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Anti-oligonucleotide design for blocking microRNA, is it even possible?
microrna mirna written 4 months ago by bhagyashreemohanty0 • 0
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Bowtie1 Options For Mirna
mirna written 3.3 years ago by Varun Gupta • 850 • updated 12 weeks ago by Biostar ♦♦ 20
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Finding miRNA promoter in UCSC genome browser?
genome promoter mirna ucsc written 12 weeks ago by g-frans • 0
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1
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1
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converting mutual information matrix to gene regulatory network
grn mirna parmigene R written 3 months ago by F • 2.6k • updated 12 weeks ago by theobroma22 • 690
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1
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197
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1
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ploting a network of mRNAs and miRNAs
R mirna target written 12 weeks ago by F • 2.6k • updated 12 weeks ago by andrew.j.skelton73 • 3.3k
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16
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9.4k
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14 follow
16
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Tool: Pan-Cancer Analysis And Networks Of LncRNAs, MiRNAs, circRNAs, CeRNAs And RNA-Binding Proteins From TCGA 14 Cancer Types and CLIP-seq data
tool cancer tcga rna-binding proteins mirna lncrna written 3.4 years ago by lsp03yjh • 450
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128
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miR KEGG enrichment in Arabidopsis
enrichment arabidopsis mir kegg mirna written 3 months ago by jnf3769 • 40
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Where can be found all the annotated miRNAs from a species?
mirbase annotation novel rna-seq mirna written 3 months ago by Martin B. • 10
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BLAST to find orthologs
orthologs python blast mirna written 3 months ago by alon.shtrikman • 0
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188
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Looking for expression dataset of mRNA and miRNA for normal/cancer samples (NOT from TCGA)
mrna expression rna-seq mirna written 3 months ago by Duc Do • 0
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finding normal and cancer samples from TCGA expression data
sequencing tcga gene expression cancer mirna written 3 months ago by F • 2.6k • updated 3 months ago by poisonAlien • 2.3k
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