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<prev • 382 results • page 1 of 13 • next >
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miRNA with UMI - any papers showing this improves accuracy?
umi mirna written 18 days ago by Richard • 530 • updated 12 hours ago by Biostar ♦♦ 20
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How to link clinical data with DE miRNA data retrieved using TCGAbiolinks
tcgabiolinks clinical mirna written 11 days ago by Björn • 30
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GTF file for Bombyx Mori
small rna bombyx mori smallrna seq mirna written 16 days ago by Sandeep • 250 • updated 16 days ago by Carambakaracho • 270
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Conduct miRNA (normalized) sequencing using TCGA-PRAD database for survival analysis ?
tcga mirna gui linkedomics tcgabiolinksgui written 17 days ago by Björn • 30
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How to combine differentially expressed miRNAs to calculate molecular signature score in edgeR?
molecular signature de edger mirna written 24 days ago by Björn • 30 • updated 20 days ago by Kevin Blighe ♦ 21k
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Tool: mirDIP 4.1 - integrative database of human microRNA target predictions
targets mirna tool microrna interactome written 24 days ago by tomastokar • 30
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miRNA-seq mature form annotation
rna-seq mirna written 24 days ago by ahadli.farid • 10
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Why not investigate non-DE miRNAs ?
differentially expressed de rna-seq edger mirna written 25 days ago by Björn • 30
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Enhancers associated to miRNA genes
enhancers promoters mirna written 26 days ago by Jaime Castro-Mondragon • 0
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How to present up and down regulated, and unchanged miRNAs in paired samples using Rstudio?
R venn diagram rna-seq mirna written 5 weeks ago by Björn • 30 • updated 29 days ago by Biostar ♦♦ 20
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Why DE genes are not among highly variable genes between groups
variance edger mirna written 7 weeks ago by Björn • 30 • updated 7 weeks ago by Devon Ryan ♦ 81k
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Software for gene co-expression network analysis / clustering enabling integration of paired miRNA-mRNA expression data
mrna wgcna mirna rna-seq gene clustering written 9 months ago by lech.kaczmarczyk • 20 • updated 7 weeks ago by Biostar ♦♦ 20
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miRNA-seq results for lung cancer
lung cancer rna-seq mirna written 7 weeks ago by ahadli.farid • 10
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miRNA Target Prediction (online/offline tools)?
rna mirna written 7 weeks ago by omer.k • 20
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How nanostring achieve miRNA specificity only by hybridisation?
nanostring mirna written 8 weeks ago by ptinto • 170
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While generating the % of mapped reads to all miRNAs, do I need to consider unique or multi-match reads?
rnaseq mirdeep2 mirna written 9 weeks ago by bioinforesearchquestions • 140
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Need help in selecting the correct output file from miRDeep2?
mirbase mirdeep2 rna-seq mirna written 3 months ago by bioinforesearchquestions • 140
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Tool: Transcription Factor Binding Sites, Motifs and Profiles from ~10200 ChIP-seq and ~20000 RNA-seq samples
transcription factor lncrna chip-seq tool mirna written 20 months ago by lsp03yjh • 550
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RNAhybrid for target gene of plant miRNAs?
miranda rna22 rnahybrid microrna mirna written 10 weeks ago by Shabazz • 0
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Conversion read counts to TPM for microRNAs
tpm mirna written 10 weeks ago by lessismore • 490 • updated 10 weeks ago by Buffo • 1.1k
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count based or cpm based filtering for miRNA normalization when library size is small.
rnaseq mirna edger differential expression cpm written 3 months ago by Björn • 30
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How to interpret summary(fit$df.prior) ?
plotqldisp edger mirna written 3 months ago by Björn • 30
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miR2Pathway and finite observations
pathway R mirna written 3 months ago by plink_9857 • 40 • updated 3 months ago by genomax ♦ 49k
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sRNAbench warnings during novel miRNA identification
novel mirna identification srnabench mirna written 3 months ago by tesic93 • 10
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Tools for miRNA detection and analysis
rna-seq mirna written 3 months ago by glady • 190
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Are there good reference for miRNA microRNA pathway analysis in R following edgeR run?
pathway analysis microrna mirna written 3 months ago by Björn • 30 • updated 3 months ago by Kevin Blighe ♦ 21k
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Stripchart to show expression of individual miRNA
stripchart gene expression edger rstudio mirna written 3 months ago by Björn • 30
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Novel miRNA identification
novel mirna identification mirna-seq mirna written 3 months ago by tesic93 • 10
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Differential Expression Analysis on miRNA Normalized data
R normalization limma rna-seq mirna written 3 months ago by joldare • 10
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Calculate enrichment and abundance of miRNA from RNA-seq result
mirna abundance mirna enrichment rna-seq mirna written 4 months ago by cosmoshighland • 0
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