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11
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1
answer
113
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1
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How to calculate delta CT in R for miRNA data
R mirna delta ct written 2 days ago by myyid68 • 30
8
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2
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5.8k
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6 follow
2
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The Result Of The Mirdeep2
mirdeep2 mirna written 5.8 years ago by hua.peng1314 • 100 • updated 6 days ago by zx8754 ♦ 8.4k
0
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0
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1.1k
views
0
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EST or EST cluster to use?
est mirna written 4.5 years ago by The Last Word • 180 • updated 16 days ago by zx8754 ♦ 8.4k
0
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1
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3.1k
views
1
answer
Finding Mirna Seed Region By Aligning Mirna And Seeing That Positions 2-8 Hit Fewer Snps
sequence snp mirna written 6.3 years ago by Click downvote • 670 • updated 25 days ago by Biostar ♦♦ 20
1
vote
1
answer
102
views
1
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miRNA fastqc sequence length distribution with UMI
qiagene trimming fastqc mirna cutadapt written 5 weeks ago by maria2019 • 50 • updated 5 weeks ago by swbarnes2 ♦ 7.0k
0
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0
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107
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0
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Different miRNAs with same miRNA regions in TCGA
mirtarbase tcga mirnaseq mirna written 6 weeks ago by Vasu • 410
3
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1
answer
124
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1
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Question about Isoform expression (miRNA) data from TCGA
mirbase mirnaseq tcga mirtarbase mirna written 7 weeks ago by Vasu • 410 • updated 7 weeks ago by i.sudbery ♦ 6.3k
0
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0
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107
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0
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Simple Workflow of Mirna Diffrential expression in galaxy or in ubuntu
rna-seq mirna written 7 weeks ago by sabaghianamir70 • 10
15
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2
answers
216
views
8 follow
2
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Question about miRNA nomenclature
mirbase mirnaseq mirna written 8 weeks ago by Vasu • 410 • updated 8 weeks ago by i.sudbery ♦ 6.3k
1
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0
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109
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0
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Differential expression of miRNAs
rna-seq mirna written 9 weeks ago by sabaghianamir70 • 10 • updated 9 weeks ago by ATpoint ♦ 26k
0
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2
answers
228
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2
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miRDeep2 "no file 'precursors.fa_stack' found" error.
rna-seq mirdeep2 mirna written 11 weeks ago by YJ • 0 • updated 10 weeks ago by kennyluo4 • 0
0
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0
answers
165
views
0
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mirna / rna-seq integration
rna-seq mirna written 10 weeks ago by ystokar • 0
0
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0
answers
113
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0
answers
How to integrate mirdeep2 result from different samples
mirdeep2 rna-seq mirna written 11 weeks ago by kennyluo4 • 0
0
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0
answers
136
views
0
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mirna docking with HDOCK
mirna hdock docking written 3 months ago by koustavroy88 • 0 • updated 3 months ago by ATpoint ♦ 26k
0
votes
1
answer
138
views
1
answer
Distribution of mapped reads
bedtools alignment small rnaseq rna-seq mirna written 3 months ago by ilovesuperheroes1993 • 0 • updated 3 months ago by Grinch • 70
0
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0
answers
189
views
0
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How to acquire the mature miRNA data from TCGA
tcga rna-seq mirna written 3 months ago by lykosherdshep • 70
0
votes
0
answers
125
views
0
answers
miRNA quantification on custom database
rna-seq mirna written 3 months ago by pbigbig • 200
1
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0
answers
214
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0
answers
error in deseq2
deseq2 mirna written 3 months ago by anjuraas • 10
8
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1
answer
4.1k
views
1
answer
Tool: Transcription Factor Binding Sites, Motifs and Expression Profiles from ~10200 ChIP-seq and ~20000 RNA-seq samples
transcription factor lncrna chip-seq tool mirna written 3.1 years ago by lsp03yjh • 760 • updated 3 months ago by angajalaanusha • 0
1
vote
1
answer
226
views
1
answer
small rna length distribution
mirna written 4 months ago by bioinfo_ga • 20 • updated 4 months ago by benformatics • 1.2k
1
vote
1
answer
132
views
1
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mirDeep-P file needed for plant miRNA prediction
mirdeep-p mirna written 4 months ago by polag01 • 10 • updated 4 months ago by h.mon ♦ 28k
0
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0
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173
views
0
answers
lncRNA,miRNA, gene interaction information in Rat
rat intraction lncrna mirna written 4 months ago by seta • 1.2k
6
votes
1
answer
199
views
5 follow
1
answer
miRNAs detected in bulk mRNA-Seq data - how to annotate?
R rna-seq mirna written 4 months ago by Kristin Muench • 470
1
vote
1
answer
150
views
1
answer
Pipeline validating in miRNA studies
prediction rna-seq mirna written 5 months ago by yoosefyud • 30 • updated 5 months ago by Buffo • 1.7k
0
votes
0
answers
162
views
0
answers
is there an function to summarize miRNA array probes but do nothing else?
summarise probes affy mirna written 5 months ago by RNAseqer • 110
3
votes
1
answer
232
views
1
answer
edgeR FDR always 1
fdr differentialexpression edger mirna written 5 months ago by AngAdd • 0 • updated 5 months ago by swbarnes2 ♦ 7.0k
0
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0
answers
321
views
0
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Error "Bioconductor - mirna40cdf not available"
affy mirna40cdf mirna written 5 months ago by RNAseqer • 110
1
vote
2
answers
361
views
2
answers
miRna-Seq, featureCounts problem
mirbase featurecounts mirna written 5 months ago by AngAdd • 0 • updated 5 months ago by Buffo • 1.7k
0
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0
answers
174
views
0
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whats is the best normalization technique for miRNA microarray data?
normalization microarray mirna written 5 months ago by RNAseqer • 110
0
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0
answers
192
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0
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What type of GTF file should I use for miRNAseq analysis?
rna-seq edger mirna written 6 months ago by silas008 • 100
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