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written 2.6 years ago by
Tanvir Ahamed • 270
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RamRS ♦ 17k
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written 2.6 years ago by
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written 20 days ago by
nesrine.trabelsi.n • 0
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poyarkov.stanislav • 0
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written 4 weeks ago by
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genomax ♦ 55k
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written 10 weeks ago by
Björn • 30
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written 3 months ago by
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written 3 months ago by
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3 months ago by
Kevin Blighe ♦ 28k
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Recent Replies
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A: bwa-mem: [bam_sort_core] merging from 0 files and 3 in-memory blocks by
WouterDeCoster ♦ 32k
It's not an error, a normal message from samtools sort. For sorting it stores reads either in mem...
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Thanks Kevin you are right its FPKM-UQ data.Now can you please guide me about what does the value...
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So, here we are : I want to retrieve all full length genome sequences of genus *Salmonella*. Ge...
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C: How to combine two .sam files? by
Pierre Lindenbaum ♦ 112k
> No @HD tag found. It's something wrong with my BAM files? your sam file are probably missin...
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C: How to combine two .sam files? by
WouterDeCoster ♦ 32k
1. Make sure you have a recent version of samtools installed 2. `samtools view file1.sam -o fil...
-
A: How to combine two .sam files? by
luzglongoria • 0
I have converted SAM files into BAM files samtools view -bS -o /PATH/file1.sam > file1.ba...
-
C: How to combine two .sam files? by
WouterDeCoster ♦ 32k
It can be more efficient to run alignments in parallel and merge afterwards.
-
C: How to combine two .sam files? by
grant.hovhannisyan • 1.1k
Or maybe even combine fastq files with `cat` if you have them?
-
C: How to combine two .sam files? by
WouterDeCoster ♦ 32k
Why work on sam files and not bam?
-
C: How to combine two .sam files? by
Pierre Lindenbaum ♦ 112k
`samtools merge` or picard https://broadinstitute.github.io/picard/command-line-overview.html#Mer...
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C: Why the outcome of my EMBL conversion file is all 'gap'??? by
Jerryliu • 10
Hey, sir, I have something to tell you. The program I started four days ago is still not finished...
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C: ENSEMBL annotation file for quantification: which file to use? by
WouterDeCoster ♦ 32k
It is important to make sure the chromosome identifiers are the same between your fasta reference...
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