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Showing: motif • reset
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<prev • 248 results • page 1 of 9 • next >
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difference between expectation maximisation and hypergeometric distribution for motif finding
motif hypergeometric distribution em written 8 days ago by kdc15 • 0
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66
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Reinfrorce motif search with knowledge of protein sequence / structure
motif protein written 21 days ago by massa.kassa.sc3na • 0 • updated 21 days ago by ATpoint ♦ 14k
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2
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153
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Convert Fasta format to MEME-motif format
meme-suite fimo format conversion motif fasta written 4 weeks ago by kashiff007 • 50
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149
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Extract novel motifs from protein multiple sequence alignment
R alignment motif written 8 weeks ago by dim.thebiologist • 0
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109
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significance evaluation of Motif identified by SeqLogo
alignment sequence motif written 3 months ago by weixiaokuan • 90
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1
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Motif discovery using MEME
meme motif conserved domain written 2.2 years ago by #### • 180 • updated 3 months ago by Biostar ♦♦ 20
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145
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Unusual results from meme-chip
meme-chip motif meme hocomoco cis-bp written 3 months ago by kdc15 • 0
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1
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264
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6 follow
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scan DNA sequence for known motifs
sequence motif written 3 months ago by 2nelly • 130 • updated 3 months ago by Michael Dondrup ♦ 45k
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Conserved Domain Batch Retrieval
domain plant protein motif written 5.1 years ago by bran10.sp • 0 • updated 4 months ago by Minstein • 70
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6 follow
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what does a log 2-fold change values of mean ?
gene genesequencing motif microarray sequencing written 4 months ago by a4appy23 • 10
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257
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Have several promoter sequences and wanna find out function of conserved motifs...
function meme motif written 4 months ago by pple2202 • 0 • updated 4 months ago by jared.andrews07 • 1.9k
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3
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304
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Consensus motif of closely related TFs
motif pwm sequence chip-seq transcription factor written 6 months ago by rbronste • 230 • updated 4 months ago by UnivStudent • 380
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1
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226
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Parsing AME tsv file
ame tsv meme motif bed written 4 months ago by rbronste • 230
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154
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Less number of motifs found in the real network when compared to the random network
network motif written 5 months ago by The Last Word • 170
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a mouse reference TATA box
tata box motif written 5 months ago by zhongjw11 • 0
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171
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Find methylated motifs in a plant genome from KineticsTool gff output
methylation kineticstool motif pacbio plant written 5 months ago by gabri • 50
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222
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1
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How to convert MEME MOTIF to all potential sequences?
rna meme motif sequences written 5 months ago by Oo • 0 • updated 5 months ago by jared.andrews07 • 1.9k
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2
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strand specificity of TFBS
binding transcription factor tfbs motif forum written 3.3 years ago by Chris Gene • 60 • updated 5 months ago by mt1022 • 180
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FIMO vs AME - true positive and false positives across search tools
ame fimo meme motif written 6 months ago by rbronste • 230 • updated 5 months ago by Biostar ♦♦ 20
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pssm.search from Bio.motifs not working with amino acid sequences
pssm pwm motif amino acid protein written 3.1 years ago by stefano • 0 • updated 6 months ago by RamRS ♦ 20k
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306
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1
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Downloading all Helix-turn-helix motif containing protein from bacteria
protein motif written 6 months ago by saadleeshehreen • 60 • updated 6 months ago by Elisabeth Gasteiger • 1.6k
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5 follow
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How To Find Any Of Many Motifs In Certain Sequences Using Perl?
perl sequence motif written 8.8 years ago by nikulina • 280 • updated 6 months ago by RamRS ♦ 20k
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211
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from coordinate to motif
tfbs motif written 6 months ago by Shuang He • 0
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1
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410
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1
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How to find protein motif in DNA sequence
sequence motif written 7 months ago by b.nota ♦ 6.3k
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annotatePeaks.pl Homer using "RNA"
homer chip-seq motif written 18 months ago by reubenmcgregor88 • 40 • updated 7 months ago by CrisMar • 70
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220
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How to find motif enrichment with IUPAC DNA fragment?
motif dna written 8 months ago by Shicheng Guo • 7.4k
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363
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RSAT gives strange motif calls
motif rsat chip-seq written 12 months ago by rbronste • 230 • updated 9 months ago by Jaime Castro-Mondragon • 10
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545
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5 follow
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Motif database of choice
motif rsat chip-seq written 18 months ago by rbronste • 230 • updated 10 months ago by Zcat2010 • 0
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1
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518
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FIMO target coordinates in fasta file
fasta fimo meme motif written 14 months ago by rbronste • 230 • updated 10 months ago by ATpoint ♦ 14k
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finds motif in long sequence using meme
meme bacteria motif written 10 months ago by shira.zaltsman • 10 • updated 10 months ago by Devon Ryan ♦ 88k
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