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<prev • 242 results • page 1 of 9 • next >
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Conserved Domain Batch Retrieval
domain plant protein motif written 4.7 years ago by bran10.sp • 0 • updated 9 hours ago by Minstein • 20
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50
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Plotting motif enrichment
ame meme motif pwm written 5 days ago by rbronste • 200
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1
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148
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1
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what does a log 2-fold change values of mean ?
gene genesequencing motif microarray sequencing written 11 days ago by a4appy23 • 0
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1
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122
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1
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Have several promoter sequences and wanna find out function of conserved motifs...
function meme motif written 20 days ago by pple2202 • 0 • updated 20 days ago by jared.andrews07 • 1.4k
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3
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181
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Consensus motif of closely related TFs
motif pwm sequence chip-seq transcription factor written 7 weeks ago by rbronste • 200 • updated 21 days ago by UnivStudent • 380
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Parsing AME tsv file
ame tsv meme motif bed written 22 days ago by rbronste • 200
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Less number of motifs found in the real network when compared to the random network
network motif written 24 days ago by The Last Word • 170
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a mouse reference TATA box
tata box motif written 26 days ago by zhongjw11 • 0
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81
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Find methylated motifs in a plant genome from KineticsTool gff output
methylation kineticstool motif pacbio plant written 29 days ago by gabri • 40
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How to convert MEME MOTIF to all potential sequences?
rna meme motif sequences written 4 weeks ago by Oo • 0 • updated 4 weeks ago by jared.andrews07 • 1.4k
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strand specificity of TFBS
binding transcription factor tfbs motif forum written 3.0 years ago by Chris Gene • 60 • updated 5 weeks ago by mt1022 • 170
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167
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FIMO vs AME - true positive and false positives across search tools
ame fimo meme motif written 9 weeks ago by rbronste • 200 • updated 6 weeks ago by Biostar ♦♦ 20
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pssm.search from Bio.motifs not working with amino acid sequences
pssm pwm motif amino acid protein written 2.7 years ago by stefano • 0 • updated 7 weeks ago by RamRS ♦ 19k
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1
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177
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1
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Downloading all Helix-turn-helix motif containing protein from bacteria
protein motif written 9 weeks ago by saadleeshehreen • 40 • updated 8 weeks ago by Elisabeth Gasteiger • 1.5k
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5 follow
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How To Find Any Of Many Motifs In Certain Sequences Using Perl?
perl sequence motif written 8.4 years ago by nikulina • 280 • updated 9 weeks ago by RamRS ♦ 19k
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152
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from coordinate to motif
tfbs motif written 10 weeks ago by Shuang He • 0
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1
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267
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1
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How to find protein motif in DNA sequence
sequence motif written 3 months ago by b.nota ♦ 5.3k
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annotatePeaks.pl Homer using "RNA"
homer chip-seq motif written 14 months ago by reubenmcgregor88 • 40 • updated 3 months ago by CrisMar • 70
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151
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How to find motif enrichment with IUPAC DNA fragment?
motif dna written 3 months ago by Shicheng Guo • 7.0k
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1
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289
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1
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RSAT gives strange motif calls
motif rsat chip-seq written 8 months ago by rbronste • 200 • updated 5 months ago by Jaime Castro-Mondragon • 10
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1
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450
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5 follow
1
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Motif database of choice
motif rsat chip-seq written 14 months ago by rbronste • 200 • updated 5 months ago by Zcat2010 • 0
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1
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398
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1
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FIMO target coordinates in fasta file
fasta fimo meme motif written 10 months ago by rbronste • 200 • updated 5 months ago by ATpoint ♦ 9.2k
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207
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finds motif in long sequence using meme
meme bacteria motif written 5 months ago by shira.zaltsman • 10 • updated 5 months ago by Devon Ryan ♦ 86k
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1
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221
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1
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Visualizing MEME results togeather with a Phylogenetic Tree
phylogeny domain meme protein motif written 6 months ago by venuraherath • 10 • updated 6 months ago by Sishuo Wang • 140
3
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2
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299
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2
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Extracting the exact motif location from FIMO
fimo meme motif chip-seq written 7 months ago by rbronste • 200 • updated 7 months ago by h.mon ♦ 21k
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1
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256
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motif detection from predicted gene models
motif rna-seq written 7 months ago by Kay • 0 • updated 7 months ago by Carambakaracho • 570
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1
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8 follow
1
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How to search for consensus sequence in RNA-seq data?
transcription factor motif rna-seq written 17 months ago by mamao • 0 • updated 7 months ago by Kay • 0
4
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2
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469
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DNA Motif discovery from a large number of FASTA sequences
sequence alignment motif written 7 months ago by flyguymail22 • 0 • updated 7 months ago by c.chakraborty • 100
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257
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Setting/finding the log odds detection threshold in custom homer PWMs
homer jaspar motif written 7 months ago by endrebak • 680
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Homer [findMotifsGenome.pl] result interputation.
homer chip-seq motif written 7 months ago by chiefcat • 70
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