Showing: motifreset
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pssm.search from Bio.motifs not working with amino acid sequences
pssm pwm motif amino acid protein written 2.6 years ago by stefano0 • updated 1 hour ago by Ram17k
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Consensus motif of closely related TFs
motif pwm sequence chip-seq transcription factor written 1 day ago by rbronste170 • updated 1 day ago by goodez260
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How To Find Any Of Many Motifs In Certain Sequences Using Perl?
perl sequence motif written 8.3 years ago by nikulina280 • updated 12 days ago by Ram17k
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from coordinate to motif
tfbs motif written 23 days ago by Shuang He0
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annotatePeaks.pl Homer using "RNA"
homer chip-seq motif written 12 months ago by reubenmcgregor8840 • updated 8 weeks ago by CrisMar70
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RSAT gives strange motif calls
motif rsat chip-seq written 6 months ago by rbronste170 • updated 3 months ago by Jaime Castro-Mondragon0
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Motif database of choice
motif rsat chip-seq written 12 months ago by rbronste170 • updated 3 months ago by Zcat20100
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FIMO target coordinates in fasta file
fasta fimo meme motif written 8 months ago by rbronste170 • updated 4 months ago by ATpoint7.5k
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finds motif in long sequence using meme
meme bacteria motif written 4 months ago by shira.zaltsman0 • updated 4 months ago by Devon Ryan84k
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Visualizing MEME results togeather with a Phylogenetic Tree
phylogeny domain meme protein motif written 4 months ago by venuraherath10 • updated 4 months ago by Sishuo Wang140
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Extracting the exact motif location from FIMO
fimo meme motif chip-seq written 5 months ago by rbronste170 • updated 5 months ago by h.mon19k
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motif detection from predicted gene models
motif rna-seq written 5 months ago by Kay0 • updated 5 months ago by Carambakaracho510
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How to search for consensus sequence in RNA-seq data?
transcription factor motif rna-seq written 16 months ago by mamao0 • updated 5 months ago by Kay0
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DNA Motif discovery from a large number of FASTA sequences
sequence alignment motif written 5 months ago by flyguymail220 • updated 5 months ago by c.chakraborty80
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Interpreting the output of an mRNA structural motif search algorithm
mrna motif structure written 7 months ago by Joel Wallenius10 • updated 7 months ago by Martombo2.2k
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Strandedness Of Homer For Motif Analysis
sequence motif written 5.6 years ago by user770 • updated 8 months ago by Biostar ♦♦ 20
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How to find list of gene name from HOMER motif output
homer motif written 8 months ago by Mike1.0k • updated 8 months ago by mcjmigdal10
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How to retrieve all pentamer from a sequence?
pentamer sequence motif written 8 months ago by haro230 • updated 8 months ago by genomax55k
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FIMO outputs only Chr1 hits
fimo meme motif written 8 months ago by rbronste170 • updated 8 months ago by Satyajeet Khare1.3k
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De-novo motif discovery and repeats
de novo fimo meme motif written 8 months ago by rbronste170 • updated 8 months ago by Alex Reynolds25k
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HOMER target sequence location
homer chip-seq motif written 19 months ago by rbronste170 • updated 9 months ago by bsharmi620
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