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<prev • 226 results • page 1 of 8 • next >
3
votes
2
answers
102
views
2
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Extracting the exact motif location from FIMO
fimo meme motif chip-seq written 14 days ago by rbronste • 160 • updated 14 days ago by h.mon ♦ 13k
0
votes
1
answer
98
views
1
answer
motif detection from predicted gene models
motif rna-seq written 18 days ago by Kay • 0 • updated 15 days ago by Carambakaracho • 160
2
votes
1
answer
679
views
8 follow
1
answer
How to search for consensus sequence in RNA-seq data?
transcription factor motif rna-seq written 11 months ago by mamao • 0 • updated 18 days ago by Kay • 0
4
votes
2
answers
163
views
2
answers
DNA Motif discovery from a large number of FASTA sequences
sequence alignment motif written 4 weeks ago by flyguymail22 • 0 • updated 29 days ago by c.chakraborty • 60
0
votes
0
answers
55
views
0
answers
Setting/finding the log odds detection threshold in custom homer PWMs
homer jaspar motif written 4 weeks ago by endrebak • 570
0
votes
0
answers
79
views
0
answers
Homer [findMotifsGenome.pl] result interputation.
homer chip-seq motif written 4 weeks ago by chiefcat • 70
1
vote
0
answers
99
views
0
answers
match, mismatch, gap parameters for short DNA motifs
motif pairwise alignment dna written 5 weeks ago by odoluca • 20
0
votes
0
answers
115
views
0
answers
RSAT gives strange motif calls
motif rsat chip-seq written 6 weeks ago by rbronste • 160
0
votes
1
answer
128
views
1
answer
Interpreting the output of an mRNA structural motif search algorithm
mrna motif structure written 12 weeks ago by Joel Wallenius • 10 • updated 12 weeks ago by Martombo • 2.0k
2
votes
2
answers
2.7k
views
2
answers
Strandedness Of Homer For Motif Analysis
sequence motif written 5.1 years ago by user • 770 • updated 3 months ago by Biostar ♦♦ 20
0
votes
1
answer
285
views
1
answer
How to find list of gene name from HOMER motif output
homer motif written 3 months ago by Mike • 950 • updated 3 months ago by mcjmigdal • 10
0
votes
0
answers
192
views
0
answers
FIMO target coordinates in fasta file
fasta fimo meme motif written 3 months ago by rbronste • 160
3
votes
2
answers
152
views
2
answers
How to retrieve all pentamer from a sequence?
pentamer sequence motif written 3 months ago by haro • 220 • updated 3 months ago by genomax ♦ 46k
0
votes
0
answers
204
views
0
answers
FIMO outputs only Chr1 hits
fimo meme motif written 3 months ago by rbronste • 160 • updated 3 months ago by Satyajeet Khare • 1.2k
0
votes
1
answer
234
views
1
answer
De-novo motif discovery and repeats
de novo fimo meme motif written 3 months ago by rbronste • 160 • updated 3 months ago by Alex Reynolds ♦ 23k
0
votes
0
answers
288
views
0
answers
How to build HMM from position weight matrix?
motif meme hmm pwm written 4 months ago by jespinoz • 20
0
votes
0
answers
248
views
0
answers
Use PWM from CISBP-rna to find motif with MEME (FIMO)
cisbp meme motif written 4 months ago by ZheFrench • 120
0
votes
0
answers
483
views
0
answers
HOMER target sequence location
homer chip-seq motif written 14 months ago by rbronste • 160 • updated 4 months ago by bsharmi6 • 20
2
votes
1
answer
370
views
1
answer
Motif prediction in Chip-seq data
chip-seq next-gen motif written 6 months ago by anu014 • 140 • updated 5 months ago by simon.vanheeringen • 140
8
votes
2
answers
3.5k
views
5 follow
2
answers
How To Merge Consensus Motif To Degenerate Motif ? [Motif Merge Or Motif Clustering]
consensus merge motif clustering written 5.1 years ago by Yu • 100 • updated 6 months ago by Biostar ♦♦ 20
8
votes
2
answers
2.3k
views
2
answers
Resurrecting Dna Motif Finding Project
motif written 6.5 years ago by Faheemmitha • 200 • updated 6 months ago by Biostar ♦♦ 20
0
votes
0
answers
405
views
0
answers
Motif prediction in Bacteria species using HOMER [Chip-seq]
genome motif next-gen chip-seq written 8 months ago by anu014 • 140 • updated 6 months ago by Biostar ♦♦ 20
2
votes
1
answer
304
views
1
answer
Eliminating repetetive motifs found by MEME
motif meme chip-seq written 7 months ago by rbronste • 160 • updated 7 months ago by Alex Reynolds ♦ 23k
0
votes
0
answers
306
views
0
answers
MEME motif width
chip-seq meme motif written 7 months ago by rbronste • 160
0
votes
1
answer
455
views
1
answer
annotatePeaks.pl Homer using "RNA"
homer chip-seq motif written 7 months ago by reubenmcgregor88 • 40 • updated 7 months ago by genomax ♦ 46k
1
vote
1
answer
284
views
1
answer
Motif database of choice
motif rsat chip-seq written 7 months ago by rbronste • 160 • updated 7 months ago by jared.andrews07 • 680
0
votes
1
answer
533
views
1
answer
Homer motif analysis: "Very close % of target vs % of Background sequences with Motif" & "SeqBias at 1st rank"
homer chip-seq motif written 7 months ago by chiefcat • 70 • updated 7 months ago by ildem • 20
0
votes
1
answer
526
views
1
answer
RNA Motif discovery tools
rna discovery motif tools cmfinder written 15 months ago by arunbodd • 10 • updated 7 months ago by jaimep887 • 0
4
votes
1
answer
441
views
6 follow
1
answer
TF motif binding region searching script in human genome
motif logo written 10 months ago by Shicheng Guo • 4.7k
0
votes
1
answer
422
views
1
answer
motif and domain finder
domain alignment motif tool written 8 months ago by misbahabas • 40 • updated 8 months ago by Sej Modha • 2.8k
<prev • 226 results • page 1 of 8 • next >
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