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Motif search on a DNA sequence in a gff file (ipdSummary output)
python gff ipdsummary motif bash written 1 day ago by gabri50 • updated 19 hours ago by Joe17k
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Best practice to find regulatory motifs in a set of sequences
finding motif regulatory written 18 days ago by jeni20 • updated 18 days ago by Mensur Dlakic5.8k
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Visualizing MEME results togeather with a Phylogenetic Tree
phylogeny domain meme protein motif written 2.2 years ago by venuraherath20 • updated 5 months ago by letunic10
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How to read AlignACE result?
alignace discovery motif tfbs dna written 5.0 years ago by allyson1115ar20 • updated 6 months ago by chernouhov sergey50
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Use PWM from CISBP-rna to find motif with MEME (FIMO)
cisbp meme motif written 2.6 years ago by ZheFrench300 • updated 8 months ago by biofalconch460
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Is it possible to convert Minimal MEME Motif Format to PFMatrix
motif meme pfm written 9 months ago by guandongshang0 • updated 9 months ago by Mensur Dlakic5.8k
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Programm/tool for drawing promoter motif image
image R promoter motif written 4.4 years ago by teresa.noviello890 • updated 9 months ago by Biostar ♦♦ 20
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Biopython Bio.motifs: How to create a motif object with aligned sequences
python alignment motif written 9 months ago by kinetic0 • updated 9 months ago by Eric Lim1.7k
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Running meme suite FIMO in parallel
mpi motif transcription written 11 months ago by Marouen Ben Guebila0 • updated 11 months ago by RamRS27k
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How to search for consensus sequence in RNA-seq data?
transcription factor motif rna-seq written 3.1 years ago by mamao0 • updated 11 months ago by Biostar ♦♦ 20
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Which transcriptin factor bind to specific motif in mouse
motif written 11 months ago by Calangoa30 • updated 11 months ago by RamRS27k
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Obtaining transcription factors from DNA consensus motif
meme motif tf transcription factors written 5.9 years ago by drautuna60 • updated 12 months ago by ATpoint36k
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from coordinate to motif
tfbs motif written 22 months ago by Shuang He0 • updated 13 months ago by Alex Reynolds30k
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Motif analysis in repeat-rich ChIP-seq data?
chip-seq meme motif written 13 months ago by robbuurstede0 • updated 13 months ago by simon.vanheeringen190
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find transcription factor binding site with small sequence from UCSC
bindingsite motif ucsc written 13 months ago by kdc1540 • updated 13 months ago by geek_y11k
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How to find motif enrichment with IUPAC DNA fragment?
motif dna written 23 months ago by Shicheng Guo8.2k • updated 13 months ago by max.rempel20
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Finding repeats in proteins
software repeats finder motif written 14 months ago by newacclol10 • updated 14 months ago by RamRS27k
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Issue with replicating from a research paper-motifs
fasta rna meme sequence motif written 14 months ago by joshua.steier20 • updated 14 months ago by geek_y11k
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Converting motif databases from meme suite to other formats
meme format motif written 15 months ago by nanoide50 • updated 15 months ago by Alex Reynolds30k
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