Latest
Open
RNA-Seq
ChIP-Seq
SNP
Assembly
Tutorials
Tools
Jobs
Forum
Planet
All »
Home
Log In
Showing selected topics • reset
or   Classic search
<prev • 26 results • page 1 of 1 • next >
0
votes
1
answer
232
views
1
answer
Finding a way to automatically screen RNA sequences for possible editing sites
viruses sequence rna-editing motifs written 12 months ago by gabrieldupre28 • 0 • updated 5 months ago by Biostar ♦♦ 20
0
votes
0
answers
227
views
0
answers
DREME [MEME-suite] run locally results in empty output
dreme dna rna-seq motifs written 7 months ago by ktm • 0 • updated 5 months ago by Biostar ♦♦ 20
0
votes
1
answer
1.8k
views
1
answer
Repetitive motifs on Illumina 450k derived sequences
450k dna methylation meme motifs illumina written 5.0 years ago by gbayon • 160 • updated 6 months ago by Ventrilocus • 80
0
votes
0
answers
274
views
0
answers
Using MEMEChip for finding transcription factor binding sites motifs
memechip chip-seq transcription factors motifs written 10 months ago by may6343 • 0
4
votes
0
answers
1.3k
views
0
answers
Tool: pytfmpval: Efficient, accurate p-value computation for position weight matrices
pwm tool p-value python chip-seq motifs written 2.4 years ago by jared.andrews07 ♦ 8.3k • updated 16 months ago by caokai001 • 0
5
votes
1
answer
1.3k
views
1
answer
Differences between motif enrichment analysis and footprinting in the context of DNAse-seq/ATAC-seq
atac-seq footprinting dnase-seq motifs written 22 months ago by nanoide • 60 • updated 22 months ago by geek_y ♦ 11k
6
votes
1
answer
1.3k
views
1
answer
Help with HOMER motif profile plots
homer motifs written 23 months ago by venu ♦ 6.7k
4
votes
2
answers
927
views
5 follow
2
answers
Get -400bp to +50bp sequence of gene from gff3 file
upstream promoter downstream motifs written 23 months ago by Biogeek • 400 • updated 23 months ago by Alex Reynolds ♦ 31k
0
votes
2
answers
611
views
2
answers
RNA-binding motifs matching
motifs tomtom protein rna-binding written 2.1 years ago by kowdelta • 0 • updated 2.1 years ago by Alex Reynolds ♦ 31k
3
votes
0
answers
601
views
0
answers
FIMO output that preserves padj values
fimo meme deseq2 chip-seq motifs written 2.4 years ago by rbronste • 370
3
votes
1
answer
2.2k
views
1
answer
Homer error (findMotifs.pl) : are you sure you chose the right length for motif finding?
homer chip-seq motifs written 2.4 years ago by salamandra • 350 • updated 2.4 years ago by Kevin Blighe ♦ 69k
3
votes
1
answer
1.9k
views
1
answer
How to use a specific promoter set on findMotifs.pl of HOMER?
homer promoter set chip-seq motifs written 2.4 years ago by salamandra • 350 • updated 2.4 years ago by Kevin Blighe ♦ 69k
2
votes
1
answer
1.5k
views
1
answer
Finding motifs using MSA?
bioinformatics alignment motifs written 2.9 years ago by Tamador • 10 • updated 2.9 years ago by Buffo • 1.8k
2
votes
1
answer
2.2k
views
1
answer
Where are .motif files from homer knownResults?
homer chip-seq atac-seq motifs written 3.4 years ago by Benn ♦ 8.0k • updated 3.2 years ago by Malcolm.Cook • 1.1k
0
votes
0
answers
983
views
0
answers
Tool: GimmeMotifs 0.11.1: for all your transcription factor motif needs
transcription factor chip-seq tool regulatory motifs written 3.4 years ago by simon.vanheeringen • 200
0
votes
0
answers
801
views
0
answers
Interpret fimo results in negative strand
fimo transcription factors motifs written 3.6 years ago by anshupa.vssut • 50 • updated 3.6 years ago by GenoMax ♦ 94k
1
vote
0
answers
907
views
0
answers
Novel RNA motif functional analysis
functions motifs written 3.9 years ago by john • 40 • updated 3.8 years ago by Biostar ♦♦ 20
0
votes
0
answers
2.2k
views
0
answers
Homer findMotifsGenome.pl error
homer chip-seq atac-seq motifs written 3.9 years ago by lvande • 50
0
votes
1
answer
916
views
1
answer
Visualization of Motif synteny
synteny motifs written 3.9 years ago by arunprasanna83 • 40 • updated 3.9 years ago by natasha.sernova • 3.8k
4
votes
2
answers
2.0k
views
2
answers
How to search with a motif matrix against my own sequences?
jaspar motifs written 4.2 years ago by RNAseq • 0 • updated 4.2 years ago by Santosh Anand ♦ 5.2k
4
votes
1
answer
1.4k
views
1
answer
Compare two sets of sequences generating similar PWM (logos)
pwm sequence logo motifs written 4.4 years ago by fernando.cid • 20 • updated 4.4 years ago by Biojl • 1.7k
0
votes
0
answers
1.7k
views
0
answers
How to plot Motifs in igraph?
ppi igraph motifs written 4.6 years ago by Saeed Rahmani • 10
0
votes
1
answer
1.6k
views
1
answer
how to find motif across few protein sequences ?
sequence alignment proteins motifs written 4.6 years ago by Learner • 230 • updated 4.6 years ago by ALchEmiXt • 1.9k
3
votes
2
answers
1.1k
views
2
answers
Motifs data base
dreme motifs rna-seq dna written 4.7 years ago by Ati • 30 • updated 4.7 years ago by Girolamo • 140
0
votes
1
answer
1.5k
views
1
answer
Sequence clustering and motif identification.
alignment sequence clustering motifs written 5.7 years ago by gtho123 • 220 • updated 5.7 years ago by dago • 2.6k
4
votes
2
answers
2.9k
views
2
answers
Co-occurring TF motifs in peak file from ChIP-seq experiment
chip-seq motifs written 6.5 years ago by Dataminer • 2.7k • updated 6.5 years ago by Ming Tang • 2.6k
<prev • 26 results • page 1 of 1 • next >
Recent Votes
Recent Locations • All »
  • Iran, 2 minutes ago
Recent Awards • All »
Recent Replies
Content
Help
Access
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.3.0
Traffic: 1776 users visited in the last hour