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DREME [MEME-suite] run locally results in empty output
dreme dna rna-seq motifs written 7 months ago by ktm0 • updated 5 months ago by Biostar ♦♦ 20
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Repetitive motifs on Illumina 450k derived sequences
450k dna methylation meme motifs illumina written 5.0 years ago by gbayon160 • updated 6 months ago by Ventrilocus80
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Help with HOMER motif profile plots
homer motifs written 23 months ago by venu6.7k
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Get -400bp to +50bp sequence of gene from gff3 file
upstream promoter downstream motifs written 23 months ago by Biogeek400 • updated 23 months ago by Alex Reynolds31k
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RNA-binding motifs matching
motifs tomtom protein rna-binding written 2.1 years ago by kowdelta0 • updated 2.1 years ago by Alex Reynolds31k
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How to use a specific promoter set on findMotifs.pl of HOMER?
homer promoter set chip-seq motifs written 2.4 years ago by salamandra350 • updated 2.4 years ago by Kevin Blighe69k
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Finding motifs using MSA?
bioinformatics alignment motifs written 2.9 years ago by Tamador10 • updated 2.9 years ago by Buffo1.8k
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Where are .motif files from homer knownResults?
homer chip-seq atac-seq motifs written 3.4 years ago by Benn8.0k • updated 3.2 years ago by Malcolm.Cook1.1k
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Interpret fimo results in negative strand
fimo transcription factors motifs written 3.6 years ago by anshupa.vssut50 • updated 3.6 years ago by GenoMax94k
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Novel RNA motif functional analysis
functions motifs written 3.9 years ago by john40 • updated 3.8 years ago by Biostar ♦♦ 20
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Visualization of Motif synteny
synteny motifs written 3.9 years ago by arunprasanna8340 • updated 3.9 years ago by natasha.sernova3.8k
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How to search with a motif matrix against my own sequences?
jaspar motifs written 4.2 years ago by RNAseq0 • updated 4.2 years ago by Santosh Anand5.2k
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Compare two sets of sequences generating similar PWM (logos)
pwm sequence logo motifs written 4.4 years ago by fernando.cid20 • updated 4.4 years ago by Biojl1.7k
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How to plot Motifs in igraph?
ppi igraph motifs written 4.6 years ago by Saeed Rahmani10
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how to find motif across few protein sequences ?
sequence alignment proteins motifs written 4.6 years ago by Learner 230 • updated 4.6 years ago by ALchEmiXt1.9k
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Motifs data base
dreme motifs rna-seq dna written 4.7 years ago by Ati30 • updated 4.7 years ago by Girolamo140
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Sequence clustering and motif identification.
alignment sequence clustering motifs written 5.7 years ago by gtho123220 • updated 5.7 years ago by dago2.6k
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Co-occurring TF motifs in peak file from ChIP-seq experiment
chip-seq motifs written 6.5 years ago by Dataminer2.7k • updated 6.5 years ago by Ming Tang2.6k
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