Showing:
mphf • reset0
votes
1
answer
733
views
1
answer
written 2.3 years ago by
k.e.cadorna • 0
• updated
2.1 years ago by
Rayan Chikhi • 1.4k
Recent Votes
- A: Purines and pyrimidines in frame shift mutations
- C: edgeR gives no DE genes <0.05 FDR
- C: edgeR gives no DE genes <0.05 FDR
- C: edgeR gives no DE genes <0.05 FDR
- Bash One-liners collection on Github
- DESeq2 multiple group comparison
- Comparing values of a column if it falls between values of two columns of a different data set and creating new column
Recent Locations •
All »
- United States, 3 minutes ago
- China, 6 minutes ago
- Texas, 12 minutes ago
Recent Awards • All »
- Teacher to Dave Carlson • 250
- Appreciated to Anima Mundi • 2.4k
- Teacher to Kevin Blighe ♦ 50k
- Scholar to Kevin Blighe ♦ 50k
- Teacher to Brice Sarver • 3.1k
- Teacher to zx8754 ♦ 8.3k
Recent Replies
-
C: What to think about when treating scRNA-Seq data as bulk RNA-Seq data by
shoujun.gu • 240
You can use scDE tools, such as DESingle, etc. Bulk analysis usually do not consider dropouts.
-
C: edgeR gives no DE genes <0.05 FDR by
Charles Warden ♦ 7.3k
I think this is very important - you need to critically assess your results. Even if there is a ...
-
A: What to think about when treating scRNA-Seq data as bulk RNA-Seq data by
danvoronov • 10
I was wondering if it was possible to use one or more of the FASTQ files (if you have 10x genomic...
-
A: Making nice plots based on the different metrics from VCF file by
pwwang • 0
Try this out: https://github.com/pwwang/vcfstats
-
C: RNA sequencing how to see expression value by
mxlsherry1992 • 30
Hi, sorry for the unclear statement, I don't need to compare the expression value between A, B sp...
-
A: RNA sequencing how to see expression value by
mxlsherry1992 • 30
Hi, sorry for the unclear statement, I don't need to compare the expression value between A, B sp...
-
C: Aligning short oligos containing Ns to a genome by
archana.bioinfo87 • 170
Hi, If your file is not too big than you can try this command. Here your query sequence will act...
-
C: Aligning short oligos containing Ns to a genome by
ATpoint ♦ 24k
Not sure about BLAST but most NGS aligners consider ambiguous (non-ATCG) characters as mismatches...
-
A: RNA sequencing how to see expression value by
swbarnes2 ♦ 6.7k
I don't think comparing values from two different pipelines is going to yield anything meaningful...
-
A: Blast2Go annotation question by
Mensur Dlakic • 1.7k
There are several reasons why a protein would have `uncharacterized`, `unknown` or `hypothetical`...
-
C: How to count and compare k-mer count vectors (and print the top ten highest cont by
nihaldm169 • 0
The speed doesn't matter, no. And I don't know how big the sequences are... We got sent two files...
-
C: Finding the barcodes (3' adapters) of multiplexed samples by
rosgreg21703 • 0
Yes exactly. What's more, I wanted to solve this problem from scratch using Python, that's why at...
Use of this site constitutes acceptance of our User
Agreement
and Privacy
Policy.
Powered by Biostar
version 2.3.0
Traffic: 1332 users visited in the last hour