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Exclamation mark in Samtools mpileup output
bam samtools mapping mpileup written 6 weeks ago by pr10 • updated 6 weeks ago by gb1.7k
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in bcftools mpileup output, the DP number is not equal to depth in I16 tag
i16 bcftools mpileup written 4 months ago by wm350 • updated 3 months ago by harold.smith.tarheel4.5k
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How to reconstruct reads or bam file from pileup
alignment samtools mpileup bam written 6 months ago by SSK10 • updated 6 months ago by h.mon29k
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.bam mpileup mapping quality
samtools mapq mpileup sanger fastq written 6 months ago by saar.armon0 • updated 6 months ago by jkbonfield350
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Consensus sequence from multiple BAM files on a single position
bam samtools mpileup written 6 months ago by Federico Giorgi590 • updated 6 months ago by jkbonfield350
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Command line explain
bcftools mpileup written 8 months ago by f1978hp30 • updated 8 months ago by finswimmer13k
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Samtools mpileup with 10x data
samtools mpileup written 10 months ago by lali10
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Multimapping reads intervention in SNP calling
alignment samtools snp mpileup written 15 months ago by sambioinfo20180 • updated 13 months ago by Biostar ♦♦ 20
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Mpileup Segmentation Fault
mpileup written 7.6 years ago by AW350 • updated 14 months ago by Biostar ♦♦ 20
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SNP calling using samtools
rnaseq samtools bcftools snp mpileup written 15 months ago by ankit hinsu10 • updated 14 months ago by Biostar ♦♦ 20
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getting the HOM_REF genotypes using bcftools mpileup+call ?
bcftools variant call mpileup genotype written 14 months ago by Pierre Lindenbaum127k • updated 14 months ago by RamRS26k
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