Showing: mpileupreset
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Read depth calling for X chromsome - script modification
read depth calling samtools mpileup written 11 months ago by mbhargava20030 • updated 20 days ago by Biostar ♦♦ 20
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samtools mpileup output documentation
samtools mpileup output written 4 weeks ago by bec0 • updated 4 weeks ago by James Bonfield60
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Calling SNPs with low coverage
vcf low-coverage samtools mpileup snp written 9 weeks ago by devin.porter920 • updated 8 weeks ago by Brian Bushnell12k
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emtpy bcf file
alignment samtools mpileup written 4 months ago by Illinu80
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Bam-readcounts min-base-quality not giving expected output
bam-readcount mpileup written 4 months ago by sheenams50 • updated 4 months ago by Chris Miller18k
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What is mean that mpileup read depth (read count) 0?
samtools mpileup written 5 months ago by Peavil10 • updated 5 months ago by Devon Ryan68k
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Sam Tools Pileup Format
format samtools mpileup written 5.2 years ago by Vittorio Fortino20 • updated 5 months ago by Biostar ♦♦ 20
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How best to parse samtools mpileup results?
vcf samtools vcftools mpileup written 5 months ago by yarmda0 • updated 5 months ago by Pierre Lindenbaum95k
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Difference between samtools DEPTH and MPILEUP
reads samtools chip-seq mpileup depth written 8 months ago by ariel.balter100 • updated 8 months ago by Devon Ryan68k
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Extract Base Based On Position From Bam File
samtools mpileup written 5.0 years ago by Empyrean150 • updated 8 months ago by stephanieP0
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samtools mpileup not calling small (6 base) INSERT
indel vcf samtools mpileup prokaryote written 12 months ago by ALchEmiXt1.8k • updated 9 months ago by sb10
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Error in running a Samtools mpileup script for getting base frequency information
genome mpileup written 10 months ago by jigarnt30 • updated 10 months ago by Devon Ryan68k
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