Showing: mpileupreset
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Unsynchronized simultaneous reads on a single .bam file
bam samtools mpileup written 4 weeks ago by kennethlim2060 • updated 4 weeks ago by Brian Bushnell14k
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Samtools mpileup output: missing fields?
rnaseq samtools pileup mpileup written 10 weeks ago by cjaln0 • updated 10 weeks ago by John Marshall1.1k
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Samtools mpileup degenerative characters
samtools degenrative characters mpileup written 4 months ago by divya10 • updated 11 weeks ago by Biostar ♦♦ 20
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How to filter a multisample VCF based on individual sample depth?
vcf samtools mpileup gbs written 4 months ago by jtwalker10 • updated 4 months ago by Pierre Lindenbaum100k
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samtools mpileup output documentation
samtools mpileup output written 6 months ago by bec10 • updated 6 months ago by James Bonfield110
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Calling SNPs with low coverage
vcf low-coverage samtools mpileup snp written 7 months ago by devin.porter920 • updated 5 days ago by pierre.peterlongo630
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emtpy bcf file
alignment samtools mpileup written 9 months ago by Illinu90
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Bam-readcounts min-base-quality not giving expected output
bam-readcount mpileup written 9 months ago by sheenams50 • updated 9 months ago by Chris Miller19k
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What is mean that mpileup read depth (read count) 0?
samtools mpileup written 9 months ago by Peavil10 • updated 9 months ago by Devon Ryan73k
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How best to parse samtools mpileup results?
vcf samtools vcftools mpileup written 10 months ago by yarmda0 • updated 10 months ago by Pierre Lindenbaum100k
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Difference between samtools DEPTH and MPILEUP
reads samtools chip-seq mpileup depth written 13 months ago by ariel.balter110 • updated 13 months ago by Devon Ryan73k
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Error in running a Samtools mpileup script for getting base frequency information
genome mpileup written 15 months ago by jigarnt30 • updated 15 months ago by Devon Ryan73k
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