Showing: mpileupreset
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Unsynchronized simultaneous reads on a single .bam file
bam samtools mpileup written 4 days ago by kennethlim2060 • updated 4 days ago by Brian Bushnell14k
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Samtools mpileup output: missing fields?
rnaseq samtools pileup mpileup written 6 weeks ago by cjaln0 • updated 6 weeks ago by John Marshall1.1k
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Samtools mpileup degenerative characters
samtools degenrative characters mpileup written 3 months ago by divya10 • updated 6 weeks ago by Biostar ♦♦ 20
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How to filter a multisample VCF based on individual sample depth?
vcf samtools mpileup gbs written 3 months ago by jtwalker10 • updated 3 months ago by Pierre Lindenbaum99k
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358
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Read depth calling for X chromsome - script modification
read depth calling samtools mpileup written 15 months ago by mbhargava20030 • updated 4 months ago by Biostar ♦♦ 20
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6 follow
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samtools mpileup output documentation
samtools mpileup output written 5 months ago by bec10 • updated 5 months ago by James Bonfield110
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Calling SNPs with low coverage
vcf low-coverage samtools mpileup snp written 6 months ago by devin.porter920 • updated 5 months ago by Brian Bushnell14k
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emtpy bcf file
alignment samtools mpileup written 8 months ago by Illinu90
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327
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Bam-readcounts min-base-quality not giving expected output
bam-readcount mpileup written 8 months ago by sheenams50 • updated 8 months ago by Chris Miller18k
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What is mean that mpileup read depth (read count) 0?
samtools mpileup written 8 months ago by Peavil10 • updated 8 months ago by Devon Ryan71k
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5 follow
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Sam Tools Pileup Format
format samtools mpileup written 5.6 years ago by Vittorio Fortino20 • updated 9 months ago by Biostar ♦♦ 20
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How best to parse samtools mpileup results?
vcf samtools vcftools mpileup written 9 months ago by yarmda0 • updated 9 months ago by Pierre Lindenbaum99k
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Difference between samtools DEPTH and MPILEUP
reads samtools chip-seq mpileup depth written 12 months ago by ariel.balter110 • updated 12 months ago by Devon Ryan71k
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12
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10 follow
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Extract Base Based On Position From Bam File
samtools mpileup written 5.3 years ago by Empyrean150 • updated 12 months ago by stephanieP0
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