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From the MrBayes tree output files, which trees tree.con file can be used? The tree1.con or tree2.con?
mrbayes sumt tree written 4 months ago by willianarcunha • 0
6
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1
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228
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1
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running RAxML and MrBayes over concatinated multiple sequence alignments
mrbayes phylogeny raxml maximum likelihood written 4 months ago by Moses • 110
2
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1
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246
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1
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MrBayes batch scripting
mrbayes bash written 5 months ago by DNAlias • 0 • updated 5 months ago by Mensur Dlakic • 4.0k
1
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181
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MrBayes: placing a new branch on an existing tree
mrbayes phylogenetics written 6 months ago by DNAlias • 0
2
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1
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936
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1
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How to run MrBayes on a Linux cluster
mrbayes mpiexec linux cluster written 11 months ago by friist • 20 • updated 11 months ago by h.mon ♦ 29k
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1
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272
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1
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Why do I get young ages (like uncalibated BLs) for node dating in MrBayes?
mrbayes divergence time dating written 11 months ago by 17th Level Botanist • 40
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1
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1.9k
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1
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Testing a force topology in mrBayes
mrbayes evolutionary analysis written 4.8 years ago by Reema Singh • 150 • updated 11 months ago by 17th Level Botanist • 40
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653
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MrBayes - sumt - summarize tree samples in older analyses
mrbayes sumt written 15 months ago by robwhite • 0
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1.2k
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MrBayes Log likelihood stuck on a single value
mrbayes phylogenetics beagle written 3.2 years ago by Whetting • 1.5k • updated 16 months ago by uzmaabdulsalam • 0
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403
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I can't open con file via tree view
mrbayes treeview written 18 months ago by pakunaj • 0
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Tuning MrBayes - Swapfreq, Nswaps, Nchains, and Temp
mrbayes swapfreq nswaps nchains temp written 18 months ago by gykajan • 0 • updated 18 months ago by RamRS ♦ 26k
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744
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1
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looking for a tree viewer useful for .con.tre file outputted from MrBayes
mrbayes viewer tree treeviewer written 23 months ago by ricfoz • 30 • updated 23 months ago by Kevin Blighe ♦ 56k
3
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1
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1.1k
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1
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User-defined tree in MrBayes
mrbayes phylogeny bayesian written 23 months ago by victoria_aleks • 30 • updated 23 months ago by h.mon ♦ 29k
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396
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Topogical hypothesis testing in mrBayes
mrbayes phylogeny topology stepping stone bayesian written 2.1 years ago by frederikfbaert • 0 • updated 23 months ago by Biostar ♦♦ 20
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846
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How to use a Mr Bayes Plugin in Geneious program
mrbayes model selection test geneious plugin written 2.1 years ago by leticia • 0
11
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1
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1.8k
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1
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Error with using mrbayes() wrapper from R package ips
mrbayes R phylogenetics ips written 3.1 years ago by ecolonaut • 100 • updated 3.1 years ago by ddiez • 1.8k
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858
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Limit clade credibility in MrBayes tree
mrbayes written 3.2 years ago by mrbkc.mxc • 0
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2
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2.2k
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2
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Alternative to MrBayes for BI phylogenetics?
mrbayes bayesian phylogenentics written 5.1 years ago by confusedious • 420 • updated 3.3 years ago by Biostar ♦♦ 20
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1.2k
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Changing the Model in MrBayes
mrbayes written 3.4 years ago by akschne3 • 0
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3.6k
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Converting *.con.tre into Newick format
mrbayes newick posterior probability convert written 3.9 years ago by jee-wee • 0
2
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1
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5.7k
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1
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Programs to View MrBayes Consensus Trees
mrbayes written 5.9 years ago by pld ♦ 4.8k • updated 4.1 years ago by pawan.mishra18 • 0
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1
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875
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1
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How to get diagnostics from old MrBayes runs
mrbayes written 4.2 years ago by coyk • 0 • updated 4.2 years ago by h.mon ♦ 29k
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1
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1.5k
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1
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MrBayes MPI version and weird tree
mpi mrbayes forum tree phylogeny written 4.3 years ago by cryomics • 0 • updated 4.2 years ago by Michael Dondrup ♦ 47k
3
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1
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1.2k
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1
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Phylogenetic Tree Program
mrbayes neighbor joining garli paup* written 4.9 years ago by jtbelcik • 0 • updated 4.9 years ago by Medhat ♦ 8.6k
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1
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3.7k
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1
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MrBayes chains converged, how to stop early?
phylogeny mrbayes bayesian written 4.9 years ago by Adrian Pelin • 2.4k • updated 4.9 years ago by qiyunzhu • 130
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2.0k
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The difference between posterior probability value and Clade credibility values generated by MrBayes
mrbayes phylogenetic tree written 5.0 years ago by YMTIO • 0
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2
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7.7k
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6 follow
2
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Mr. Bayes Protein Models OR How to implement prottest output in mrbayes?
mrbayes model bayesian phylogenetics prottest written 6.6 years ago by kanwalashraf07 • 30 • updated 5.3 years ago by Michael Dondrup ♦ 47k
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1
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6 follow
1
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MrBayes: Implementing the LG model
mrbayes prottest substitution written 6.0 years ago by Adrian Pelin • 2.4k • updated 5.3 years ago by Michael Dondrup ♦ 47k
1
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1
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1.3k
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1
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Difference of parallel Mrbayes results between SUSE and Ubuntu
mrbayes ubuntu mpich2 suse written 5.3 years ago by Ginsea Chen • 130 • updated 5.3 years ago by 5heikki ♦ 8.6k
2
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1
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1.3k
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1
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No split frequencies were shown in terminal when Mrbayes were set as " 1 runs and 8 chains"
mrbayes phylogenetic terminal split frequencies written 5.4 years ago by Ginsea Chen • 130 • updated 5.4 years ago by Brice Sarver • 3.5k
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