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Tool: Multiple Sequence Alignment in the Browser with custom monospace fonts
sequence alignment msa tool written 3 months ago by Ibrahim Tanyalcin • 980
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156
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Multiple sequence alignment statistics
msa statistics written 7 weeks ago by Anand Rao • 210 • updated 11 days ago by Biostar ♦♦ 20
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2
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Bootstrap & p distance distribution
phylogenetic tree msa sequencing written 20 months ago by a.alsayed.phd • 10 • updated 29 days ago by hewm2008 • 20
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179
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HH-suite custom db with precomputed MSA
hh-suite hmm msa written 6 weeks ago by mnsp088 • 20 • updated 29 days ago by Biostar ♦♦ 20
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1
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115
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MSA history summery
sequence alignment msa written 4 weeks ago by yiyodi • 0 • updated 4 weeks ago by Asaf ♦ 6.1k
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1
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136
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1
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Clustal Omega and Biopython
phylogenetic tree biopython clustal omega msa written 6 weeks ago by oonatoyou • 10 • updated 6 weeks ago by Carambakaracho • 1.4k
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6 follow
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Multiple Sequence Alignment for very large data sets
alignment msa written 17 months ago by miles.thorburn • 80 • updated 9 weeks ago by sallyzaki70 • 10
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What is the '?' in the result of R package 'msa' function 'msa'?
sequece alignment R msa consensus sequence written 10 weeks ago by YUCHEN CHANG • 10 • updated 10 weeks ago by zx8754 ♦ 7.8k
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Is FastML a good server for reconstructing ancestral protein sequence?
ancestor sequence reconstruction ancestral msa written 4.8 years ago by lia.elias • 40 • updated 4 months ago by lhernanj • 0
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How to generate multiple sequence alignments from BLAST(stand alone BLAST) hits output result?
phylogeny blast amino acid sequence msa written 4 months ago by Dineshkumar K • 10 • updated 4 months ago by gb • 810
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Multigene-Phylogeny: How to merge several Multiple-Sequence-Alignments?
fasta alignment raxml msa mafft written 4 months ago by Tom.Ma • 0 • updated 4 months ago by Brice Sarver • 2.6k
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333
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Multiple sequence alignment and visualisation for bacterial genomes
genome bacteria alignment msa sequencing written 5 months ago by rmf • 690
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187
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Sequence alignment viewer for a custom database
sequence-alignment database clustal msa written 5 months ago by pixie@bioinfo • 1.4k
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295
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Align sequences against reference MSA
alignment msa written 7 months ago by kristjan • 140 • updated 6 months ago by Biostar ♦♦ 20
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332
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Phylogenetic tree for pooled PACBio sequencing material
phylogeny pooled msa pacbio written 12 months ago by a.m.dekker • 0 • updated 11 months ago by Biostar ♦♦ 20
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439
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Generate HMM profile without an MSA (hmmer)
hmm msa hmmer written 11 months ago by elenatea.russo • 20
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1
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519
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1
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Strategies for identifying as many homologs as possible
homology phylogenetics est msa blast written 13 months ago by michael • 0 • updated 13 months ago by Michael Dondrup ♦ 46k
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442
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dN/dS within and between species
phylogeny hyphy mega paml msa written 13 months ago by krc3004 • 0
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How to generate Artemis ACT comparison file of multiple sequence alignment
act artemis comparison file msa written 4.2 years ago by rosies • 0 • updated 15 months ago by jrj.healey ♦ 13k
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1
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1
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Cogs validation: good alignment?
alignment cogs msa student written 16 months ago by c.clarido • 50 • updated 16 months ago by lieven.sterck ♦ 5.5k
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[Clustal Omega] Posterior Probability Output File; columns meaning
msa posterior probability clustal omega written 17 months ago by ReWeeda • 50
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How to keep a log of columns removed from edited MSA?
python mega msa written 18 months ago by DNAngel • 30 • updated 17 months ago by Biostar ♦♦ 20
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1
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How to get identical sequences from multiple sequence alignment
fasta alignment msa written 3.7 years ago by fcis.mms • 0 • updated 17 months ago by Biostar ♦♦ 20
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2
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7 follow
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MSA of very long sequences?
msa very long sequences written 18 months ago by majeedaasim • 40 • updated 18 months ago by jrj.healey ♦ 13k
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443
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Errors of qscore installation
scoring msa cp score msa score qscore msa written 19 months ago by hmnipunad • 0 • updated 19 months ago by genomax ♦ 69k
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How to score a multiple sequence alignment (MSA)?
sequence alignment protein msa written 3.5 years ago by mithrandir • 40 • updated 19 months ago by hmnipunad • 0
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761
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Gaps in Protein coding Sequenzes allowed?
gaps alignment protein msa written 20 months ago by dieter • 0
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1
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670
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Generating a tree (nex or nwk file) starting from msa
nexus tree newick msa written 21 months ago by lessismore • 640 • updated 21 months ago by Jean-Karim Heriche ♦ 20k
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1
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956
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primer design to discriminate sequences in intron-exon MSA
msa primer intron-exon written 22 months ago by Anand Rao • 210 • updated 22 months ago by Kevin Blighe ♦ 45k
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Consensus by aligning and extending the sequences
fasta alignment msa written 22 months ago by sbdk82 • 50 • updated 22 months ago by h.mon ♦ 26k
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