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<prev • 103 results • page 1 of 4 • next >
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Align sequences against reference MSA
alignment msa written 13 days ago by kristjan • 130
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212
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Phylogenetic tree for pooled PACBio sequencing material
phylogeny pooled msa pacbio written 5 months ago by a.m.dekker • 0 • updated 4 months ago by Biostar ♦♦ 20
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214
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Generate HMM profile without an MSA (hmmer)
hmm msa hmmer written 4 months ago by elenatea.russo • 10
4
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1
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279
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1
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Strategies for identifying as many homologs as possible
homology phylogenetics est msa blast written 6 months ago by michael • 0 • updated 6 months ago by Michael Dondrup ♦ 45k
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239
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dN/dS within and between species
phylogeny hyphy mega paml msa written 6 months ago by krc3004 • 0
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How to generate Artemis ACT comparison file of multiple sequence alignment
act artemis comparison file msa written 3.6 years ago by rosies • 0 • updated 8 months ago by jrj.healey ♦ 9.1k
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1
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268
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1
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Cogs validation: good alignment?
alignment cogs msa student written 9 months ago by c.clarido • 40 • updated 9 months ago by lieven.sterck • 3.3k
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583
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Multiple Sequence Alignment for very large data sets
alignment msa written 9 months ago by miles.thorburn • 10
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1
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365
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1
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[Clustal Omega] Posterior Probability Output File; columns meaning
msa posterior probability clustal omega written 9 months ago by ReWeeda • 30
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269
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How to keep a log of columns removed from edited MSA?
python mega msa written 11 months ago by DNAngel • 20 • updated 9 months ago by Biostar ♦♦ 20
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1
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How to get identical sequences from multiple sequence alignment
fasta alignment msa written 3.1 years ago by fcis.mms • 0 • updated 10 months ago by Biostar ♦♦ 20
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2
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632
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7 follow
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MSA of very long sequences?
msa very long sequences written 10 months ago by majeedaasim • 20 • updated 10 months ago by jrj.healey ♦ 9.1k
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1
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329
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1
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Errors of qscore installation
scoring msa cp score msa score qscore msa written 12 months ago by hmnipunad • 0 • updated 12 months ago by genomax ♦ 59k
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How to score a multiple sequence alignment (MSA)?
sequence alignment protein msa written 2.9 years ago by mithrandir • 40 • updated 12 months ago by hmnipunad • 0
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1
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584
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Gaps in Protein coding Sequenzes allowed?
gaps alignment protein msa written 12 months ago by dieter • 0
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1
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711
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1
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Bootstrap & p distance distribution
phylogenetic tree msa sequencing written 13 months ago by a.alsayed.phd • 10 • updated 13 months ago by Kevin Blighe ♦ 33k
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1
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450
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1
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Generating a tree (nex or nwk file) starting from msa
nexus tree newick msa written 13 months ago by lessismore • 550 • updated 13 months ago by Jean-Karim Heriche ♦ 17k
2
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1
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671
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1
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primer design to discriminate sequences in intron-exon MSA
msa primer intron-exon written 15 months ago by Anand Rao • 160 • updated 15 months ago by Kevin Blighe ♦ 33k
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1
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361
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1
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Consensus by aligning and extending the sequences
fasta alignment msa written 15 months ago by sbdk82 • 30 • updated 15 months ago by h.mon ♦ 21k
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5
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11 follow
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Aligning One Protein Sequence With A Multiple Sequence Alignment
sequence alignment multiple msa written 6.5 years ago by Reyhaneh • 480 • updated 16 months ago by kamr100200 • 0
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4
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6 follow
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Filtering Msa For Phylogenetic Tree Construction
phylogenetics msa written 5.5 years ago by Pappu • 1.8k • updated 17 months ago by al-ash • 70
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1
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702
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1
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MSA scoring tools/scripts
python alignment msa written 18 months ago by jrj.healey ♦ 9.1k
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2
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1.1k
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Publication-Quality Multiple Sequence Alignment
image graphics quality msa publication written 18 months ago by l.souza • 60
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Concatenating alleles at detected sites to form fasta sequences from vcf files
vcf sequence alignment msa snp written 18 months ago by Mohak • 0 • updated 18 months ago by Devon Ryan ♦ 86k
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2
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3.1k
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Removing >90% Identical Sequnces From Sequence Alignment
msa clustering written 4.8 years ago by Pappu • 1.8k • updated 18 months ago by Biostar ♦♦ 20
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How to generate a multiple HMM file with HMMER?
hmmer stockholm msa written 18 months ago by yarmda • 0 • updated 18 months ago by Sej Modha ♦ 3.9k
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2
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811
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consensus of msa
msa written 18 months ago by flavia • 0 • updated 18 months ago by Jean-Karim Heriche ♦ 17k
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479
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Produce Multiple Sequence Alignments using Profile HMMs
baum-welch viterbi hmm msa learn written 18 months ago by bordieszter • 0
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Analysis Data And Msa
rna protein msa written 6.8 years ago by Hanan • 40 • updated 19 months ago by Biostar ♦♦ 20
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1
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1.7k
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1
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Converting Fasta to Phylip sequences sequences must be the same length
fasta format phylip msa conversion written 19 months ago by scholz.stacy • 0 • updated 19 months ago by Michael Dondrup ♦ 45k
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