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5 follow
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Error Muscle alignment (msa package, through Rscript)
R msa muscle written 11 weeks ago by alnam • 10 • updated 7 weeks ago by gildas.lepennetier • 10
3
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1
answer
113
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1
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Transcript or cds for phylogenetic tree ?
phylogenetic msa written 10 weeks ago by Picasa • 540 • updated 10 weeks ago by lieven.sterck ♦ 8.2k
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89
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ClustalW output MSA in R (without consensus)
R msa written 10 weeks ago by DNAlias • 0
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1
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110
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1
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Multiple Sequence Alignment
score sequence msa alignment mafft written 11 weeks ago by hamidrezahosseini1994 • 0 • updated 11 weeks ago by RamRS ♦ 28k
3
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1
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192
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1
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Remove sequences with (50% gaps) from MSA
alignment multple sequence alignment sequence msa written 3 months ago by nataliagru1 • 50 • updated 3 months ago by Mensur Dlakic • 6.0k
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1
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1
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Translating Nucleotide MSA to Amino Acid MSA
alignment sequence msa written 6.1 years ago by weslfield • 90 • updated 3 months ago by mrinsmrids • 0
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1
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182
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Online pipeline for MSA and NJ tree generation bootstrap supported
phylogeny nj msa written 3 months ago by lessismore • 880 • updated 3 months ago by a.zielezinski ♦ 9.2k
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166
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How to check quality of multiple sequence alignment (MSA)?
R multiple sequence alignment msa written 4 months ago by Chirag Parsania • 1.8k
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2
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190
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Predict protein secondary structure from alignment
protein alignment secondary structure msa written 4 months ago by suzanne96yao • 0 • updated 4 months ago by AsoInfo • 300
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1
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182
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1
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Multiple Sequence Alignment (Same Directory Linux)
assembly sequence msa alignment written 5 months ago by biohacker_tobe • 40 • updated 5 months ago by ATpoint ♦ 36k
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138
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Sequence Extraction from MSA
alignment msa clustal omega biopython written 5 months ago by farheenjn • 0
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1
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105
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1
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How to view MUSCLE ouput
muscle msa data visualization written 5 months ago by tw617 • 40 • updated 5 months ago by Mensur Dlakic • 6.0k
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175
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Fix t_coffee alignment with small sequence
t_coffee alignment msa written 5 months ago by cristianrohr768 • 30
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1
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1.8k
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1
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python posterior probability in stockholm file
python alignment biopython msa probability written 5.3 years ago by MAK • 10 • updated 7 months ago by Biostar ♦♦ 20
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How To Plot The The Quality Of Conservation In A Multiple Sequence Alignment
similarity msa plot written 7.0 years ago by figo • 200 • updated 11 months ago by Biostar ♦♦ 20
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775
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Tool: Multiple Sequence Alignment in the Browser with custom monospace fonts
sequence alignment msa tool written 16 months ago by Ibrahim Tanyalcin • 1.1k
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325
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Multiple sequence alignment statistics
msa statistics written 14 months ago by Anand Rao • 310 • updated 13 months ago by Biostar ♦♦ 20
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2
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1.5k
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2
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Bootstrap & p distance distribution
phylogenetic tree msa sequencing written 2.8 years ago by a.alsayed.phd • 10 • updated 13 months ago by hewm2008 • 40
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692
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HH-suite custom db with precomputed MSA
hh-suite hmm msa written 14 months ago by mnsp088 • 40 • updated 13 months ago by Biostar ♦♦ 20
1
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1
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271
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1
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MSA history summery
sequence alignment msa written 13 months ago by yiyodi • 0 • updated 13 months ago by Asaf ♦ 8.3k
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1
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1.4k
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1
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Clustal Omega and Biopython
phylogenetic tree biopython clustal omega msa written 14 months ago by oonatoyou • 10 • updated 14 months ago by Carambakaracho • 2.2k
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6 follow
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Multiple Sequence Alignment for very large data sets
alignment msa written 2.5 years ago by miles.thorburn • 100 • updated 14 months ago by sallyzaki70 • 10
2
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537
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What is the '?' in the result of R package 'msa' function 'msa'?
sequece alignment R msa consensus sequence written 15 months ago by YUCHEN CHANG • 10 • updated 15 months ago by zx8754 ♦ 9.4k
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1
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5.0k
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1
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Is FastML a good server for reconstructing ancestral protein sequence?
ancestor sequence reconstruction ancestral msa written 5.8 years ago by lia.elias • 40 • updated 17 months ago by lhernanj • 0
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1.2k
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How to generate multiple sequence alignments from BLAST(stand alone BLAST) hits output result?
phylogeny blast amino acid sequence msa written 17 months ago by Dineshkumar K • 40 • updated 17 months ago by gb • 1.8k
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Multigene-Phylogeny: How to merge several Multiple-Sequence-Alignments?
fasta alignment raxml msa mafft written 17 months ago by Tom.Ma • 0 • updated 17 months ago by Brice Sarver • 3.5k
2
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960
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Multiple sequence alignment and visualisation for bacterial genomes
genome bacteria alignment msa sequencing written 17 months ago by rmf • 950
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352
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Sequence alignment viewer for a custom database
sequence-alignment database clustal msa written 18 months ago by pixie@bioinfo • 1.4k
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613
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Align sequences against reference MSA
alignment msa written 20 months ago by kristjan • 150 • updated 19 months ago by Biostar ♦♦ 20
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502
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Phylogenetic tree for pooled PACBio sequencing material
phylogeny pooled msa pacbio written 2.1 years ago by a.m.dekker • 0 • updated 24 months ago by Biostar ♦♦ 20
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