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20
votes
5
answers
6.7k
views
11 follow
5
answers
Aligning One Protein Sequence With A Multiple Sequence Alignment
sequence alignment multiple msa written 8.3 years ago by Reyhaneh480 • updated 3.1 years ago by kamr1002000
12
votes
2
answers
3.6k
views
6 follow
2
answers
How To Best Calculate Dn/Ds Ratios Of Viral Genomes
phylogeny rna msa paml written 7.2 years ago by pld4.8k • updated 7.2 years ago by fransua390
9
votes
2
answers
2.7k
views
2
answers
Analysis Data And Msa
rna protein msa written 8.6 years ago by Hanan40 • updated 3.3 years ago by Biostar ♦♦ 20
10
votes
4
answers
3.4k
views
4
answers
Effective Scoring Function To Compare Multiple Sequence Alignments Or Phylogenetic Trees
python msa written 7.7 years ago by Pappu1.9k • updated 7.7 years ago by aidan-budd1.9k
14
votes
2
answers
12k
views
6 follow
2
answers
How To Obtain The Consensus Sequence From A Clustalo Result.
clustalo alignment clustalw msa written 7.2 years ago by muthurikim40 • updated 5.7 years ago by Michael Dondrup47k
1
vote
0
answers
1.9k
views
0
answers
2
votes
1
answer
2.2k
views
1
answer
Building Phylogenetic Tree For A 89-Sequences Msa File
msa written 6.9 years ago by layal10 • updated 6.9 years ago by Hamish3.1k
11
votes
1
answer
5.1k
views
1
answer
6
votes
1
answer
2.9k
views
1
answer
Infer ancestral sequence from a Multiple Sequence Alignment
sequence ancestral state reconstruction msa written 5.6 years ago by anuragm130 • updated 6 weeks ago by Biostar ♦♦ 20
1
vote
0
answers
1.6k
views
0
answers
4
votes
1
answer
3.2k
views
6 follow
1
answer
How to generate a multiple HMM file with HMMER?
hmmer stockholm msa written 3.3 years ago by yarmda40 • updated 3.3 years ago by Sej Modha4.7k
7
votes
0
answers
198
views
6 follow
0
answers
The Light from Below
sequence alignment msa written 17 days ago by Neo20
3
votes
1
answer
1.6k
views
1
answer
Frameshifting Algorithm For Ngs Data
next-gen msa written 8.4 years ago by jergosh60 • updated 8.4 years ago by Leonor Palmeira3.7k
4
votes
1
answer
2.9k
views
1
answer
Sequence Similarity Of Protein Alignment
similarity protein msa written 8.4 years ago by Bjoernsen40 • updated 8.4 years ago by Niek De Klein2.5k
0
votes
3
answers
3.4k
views
3
answers
What Value For The Gap Penalty Should Be Used In A Pam250 Substitution Matrix?
msa written 8.0 years ago by coderodde0 • updated 8.0 years ago by Niek De Klein2.5k
-5
votes
2
answers
4.0k
views
2
answers
Tool/Script To Get Consensus Sequences
msa written 7.9 years ago by upendrakumar.devisetty370 • updated 7.9 years ago by Damian Kao15k
1
vote
1
answer
2.8k
views
1
answer
Best Program For Recombination Detection In Msa
recombination msa written 7.9 years ago by RT350 • updated 7.0 years ago by Joseph Hughes2.8k
0
votes
1
answer
1.3k
views
1
answer
Protein Structure Prediction From Multiple Sequence Alignments
msa written 7.7 years ago by Pappu1.9k • updated 5.2 years ago by venu6.7k
14
votes
1
answer
1.9k
views
1
answer
Aligner That Preserves Case?
aligner bioperl msa written 7.7 years ago by Fwip490 • updated 7.7 years ago by Manu Prestat4.0k
1
vote
1
answer
2.8k
views
1
answer
1
vote
1
answer
2.3k
views
1
answer
1
vote
2
answers
5.2k
views
2
answers
Obtaining The Consensus Sequence From A Bam File In Fasta
fasta consensus bam msa genome written 7.5 years ago by Anima Mundi2.7k • updated 6.9 years ago by Biostar ♦♦ 20
1
vote
1
answer
3.4k
views
1
answer
Using Rate4Site To Calculate Mutation Rate Per Gene?
gene mutation msa written 7.4 years ago by anin.gregory90 • updated 7.4 years ago by Asaf8.4k
2
votes
1
answer
2.0k
views
1
answer
0
votes
0
answers
1.8k
views
0
answers
6
votes
4
answers
3.8k
views
6 follow
4
answers
Filtering Msa For Phylogenetic Tree Construction
phylogenetics msa written 7.3 years ago by Pappu1.9k • updated 3.2 years ago by al-ash140
0
votes
0
answers
2.0k
views
0
answers
3
votes
0
answers
2.2k
views
0
answers
0
votes
1
answer
1.7k
views
1
answer
Approach To Counter Under-Sampling In Per-Site Dn/Ds Ratios
codon alignment msa written 7.2 years ago by pld4.8k • updated 7.2 years ago by ivanerill0
0
votes
0
answers
2.3k
views
0
answers
How To Plot The The Quality Of Conservation In A Multiple Sequence Alignment
similarity msa plot written 7.1 years ago by figo200 • updated 13 months ago by Biostar ♦♦ 20
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