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How to read a multiple sequence alignment file?
multiple sequence alignment written 7 weeks ago by sharmatina189059 • 40 • updated 7 weeks ago by manishaB • 0
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149
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How to generate WGS Multiple sequence alignment file
multiple sequence alignment written 4 months ago by Optimist • 160
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2
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239
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2
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WGS phylogenetic analysis
phylogenetic multiple sequence alignment written 10 months ago by lkw222 • 30
9
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3
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512
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3
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16S-specific multiple alignment of rDNA sequences
multiple alignment 16s multiple sequence alignment written 10 months ago by predeus • 1.5k
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280
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How to check quality of multiple sequence alignment (MSA)?
R multiple sequence alignment msa written 12 months ago by Chirag Parsania • 1.9k
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643
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FastTree error while constructing tree
phylogeny multiple sequence alignment fasttree written 15 months ago by Moses • 120
1
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1
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332
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1
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How to tell whether an MSA result is good and how to set parameters?
alignment multiple sequence alignment written 17 months ago by wuqingkuangsha • 20 • updated 17 months ago by dago • 2.6k
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2
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959
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alignment with phylogenetic tree
phylogenetic tree multiple sequence alignment written 18 months ago by qwzhang0601 • 70
3
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1
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398
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1
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obstain 100-way alignment of 100 species for a certain gene
100-way alignment multiple sequence alignment written 19 months ago by qwzhang0601 • 70
0
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1
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524
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How to obtain multiple sequence alignments of genomes of selected vertebrate species?
multiple sequence alignment written 19 months ago by kousi31 • 30 • updated 19 months ago by andrew.j.skelton73 ♦ 6.1k
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1
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639
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Generate nucleotide multiple sequence alignment from protein alignment?
multiple sequence alignment written 22 months ago by molly77 • 10 • updated 22 months ago by h.mon ♦ 32k
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1.1k
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Phylogeny Heatmap with Python
multiple sequence alignment written 23 months ago by marina.gerges • 0
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653
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Mauve export similarity
multiple sequence alignment mauve written 2.6 years ago by rmf • 1.1k • updated 2.4 years ago by Biostar ♦♦ 20
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1.2k
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Error while running MEGAX
multiple sequence alignment megax written 2.8 years ago by Mohak • 10
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1.8k
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Multiple Sequence Alignment Python
clustlw multiple sequence alignment biopython written 2.8 years ago by Manu Madhavan • 20
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1
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812
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1
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Multiple sequence alignment over all 3'UTRs of a genome
genome alignment multiple sequence alignment 3'utr written 3.0 years ago by aramis.1994 • 10 • updated 3.0 years ago by lieven.sterck ♦ 10k
0
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1
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1.3k
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1
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Blast-XML and Biopython: extract query-anchored results (i.e. MSA)
xml multiple sequence alignment biopython blast written 3.3 years ago by LeWöps • 0 • updated 3.3 years ago by Peter ♦ 5.9k
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3
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2.2k
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3
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Aligning de-novo assembly to reference strain genome
multiple sequence alignment denovo assembly written 4.1 years ago by aindap • 120 • updated 3.4 years ago by asur • 0
0
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732
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Rearragement Scaffolds for Mutiple Sequence Alignment
post assembly multiple sequence alignment written 3.5 years ago by febrigunawan48 • 0
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1
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901
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How do matrix weights for amino acid 'X' affect protein alignments in MUSCLE?
amino acids multiple sequence alignment muscle written 3.7 years ago by rleach • 120
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2.1k
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Find conserved blocks and extract subalignment with Python
conserved edges python multiple sequence alignment written 3.8 years ago by Kevin D • 30
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1
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1.0k
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1
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multiple sequence alignment for validation of large indels
indels cnvnator multiple sequence alignment written 4.1 years ago by thomas.welch • 40
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3.2k
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Sequence alignment length
length multiple sequence alignment written 4.1 years ago by biobudhan • 20
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1.0k
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Gettin Consensus From Multiple Whole Genomes
multiple sequence alignment whole genome alignment written 4.2 years ago by nilaylale88 • 0 • updated 4.1 years ago by Biostar ♦♦ 20
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1.3k
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Get pairwise scores from alignment without re-aligning?
alignment multiple sequence alignment bit score written 4.2 years ago by mpd • 0
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1.0k
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How to use SABmark 1.65 as a benchmark?
multiple sequence alignment benchmark sabmark written 4.4 years ago by Jay • 0
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1
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2.2k
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1
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Does anyone know how to build a local conserved domain database from multiple sequence alignment for running RPS-Blast locally?
rps-blast multiple sequence alignment blast written 4.7 years ago by BioPotato • 0 • updated 4.6 years ago by marchlerbauer • 20
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1.6k
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phyML Unknown character state : (? in black diamond)
phyml phylogenetics multiple sequence alignment written 4.7 years ago by ddowlin • 70
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1
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1.2k
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1
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Filtering SNPs from a multi sequence alignment
filter multiple sequence alignment snp written 4.8 years ago by natasha • 0 • updated 4.8 years ago by Brice Sarver • 3.6k
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Extracting and joining exons from multiple sequence alignments using PERL
perl fasta multiple sequence alignment exons written 4.9 years ago by Eskimo • 90
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