Showing: mutect2reset
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GATK FilterMutectCalls parameter max germline posterior ?
gatk threshold tool mutect2 written 4 days ago by jackyen0 • updated 4 days ago by ATpoint21k
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Can Mutect2 be used for paper?
gatk mutect2 written 20 days ago by Laven90 • updated 20 days ago by Nicolas Rosewick8.0k
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Running mutect2 without PON
mutect2 written 22 days ago by ar.satkhol180
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Mutect2 (GATK4, Java8) outputs empty VCF file for tumor only mode
snv rna-seq mutect2 written 4 weeks ago by ResearchR70 • updated 4 weeks ago by RamRS23k
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How to interpret the output of gatk?
gatk vcf2maf mutect2 written 9 weeks ago by Laven90 • updated 8 weeks ago by zephyr_falcon80
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Usage of Mutect2
gatk next-gen snp rna-seq mutect2 written 10 weeks ago by gprashant1760 • updated 10 weeks ago by MatthewP210
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Mutect2 "somatic" variants with resistant tissue culture lines
gatk wes mutect2 variants genotyping written 4 months ago by shawn.w.foley840 • updated 3 months ago by Biostar ♦♦ 20
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Creating a PON in GATK
wgs gatk mutect2 written 3 months ago by F3.4k
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What is the tlod in vcf?
gatk tlod mutect2 written 4 months ago by 2yuna71010
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Qs about mutect2
gatk wes mutect2 written 10 months ago by walker20
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[STAR] 255 Mapping Quality
star rna-seq mutect2 written 3.5 years ago by umn_bist330 • updated 11 months ago by RamRS23k
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[GATK] Weird error using Picard SortVcf on COSMIC file
gatk picard rna-seq mutect2 written 3.5 years ago by umn_bist330 • updated 11 months ago by RamRS23k
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Somatic variant call
varscan2.3.9 somatic mutect2 snp variat-filtering written 2.3 years ago by sktbanerjee130 • updated 19 months ago by liangqinsi20
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How to make variant calling run faster?
variant calling gatk mutect2 written 22 months ago by steve2.2k • updated 22 months ago by Brian Bushnell16k
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Is there any way to generate interval list from available exome data?
exome gatk sequencing mutect2 written 23 months ago by Karma210 • updated 23 months ago by Pierre Lindenbaum122k
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How to filter mutect2 VCF output?
gatk alignment snp mutect2 written 2.1 years ago by Whoknows750 • updated 2.1 years ago by poisonAlien2.8k
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