Showing: mutect2reset
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Somatic variant call
varscan2.3.9 somatic mutect2 snp variat-filtering written 15 months ago by sktbanerjee130 • updated 6 months ago by liangqinsi20
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[STAR] 255 Mapping Quality
star rna-seq mutect2 written 2.4 years ago by umn_bist310 • updated 7 months ago by Biostar ♦♦ 20
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How to make variant calling run faster?
variant calling gatk mutect2 written 9 months ago by steve1.5k • updated 9 months ago by Brian Bushnell15k
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How to filter mutect2 VCF output?
gatk alignment snp mutect2 written 12 months ago by Whoknows640 • updated 12 months ago by poisonAlien2.5k
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Any better ways to filter GATK Mutect2 output?
vcf gatk mutect2 written 24 months ago by ShirleyDai20 • updated 17 months ago by igor6.3k
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MuTect2 - vcf 4.1 instead of vcf 4.2
vcf gatk rna-seq mutect2 written 2.2 years ago by umn_bist310 • updated 2.2 years ago by Biostar ♦♦ 20
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MuTect2's variants missing QUAL score
vcf 4.2 gatk rna-seq mutect2 written 2.3 years ago by umn_bist310 • updated 2.2 years ago by Istvan Albert ♦♦ 77k
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TCGA: Bash assigning a tumor to its match normal
tcga rna-seq mutect2 written 2.4 years ago by umn_bist310 • updated 2.3 years ago by Biostar ♦♦ 20
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[GATK] [MuTect2] [RNA-Seq] Adding read group ahead of annotations
gatk picard rna-seq mutect2 written 2.4 years ago by umn_bist310 • updated 2.4 years ago by Patrick_Reed0
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Reference and dbSNP incompatibility issue (MuTect2)
gatk ucsc.hg19.fa dbsnp rna-seq mutect2 written 2.5 years ago by umn_bist310 • updated 2.5 years ago by Chris Miller20k
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