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Returning gene functional annotations with gene symbols as input (using mygene Bioconductor package)
written 2.0 years ago by
Bohdan Khomtchouk • 320
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2.0 years ago by
EagleEye ♦ 6.4k
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written 4.2 years ago by
pankajnarula84 • 10
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3.0 years ago by
EagleEye ♦ 6.4k
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Recent Replies
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C: Empty VCF files produced by both Mutect2 and HaplotypeCaller? by
igor ♦ 8.0k
This might the same problem/solution: https://www.biostars.org/p/390639/
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First of all I would like to thank you very much for both the answer and help. Unfortunately, thi...
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I think what Wouter meant is that you have to call variants using the other version of the refere...
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You can also use GATK to adjust the MAPQ scores. From [Calling variants in RNAseq][1]: > STAR...
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Interesting. How would it work without chain files?
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C: Ideas on how to evaluate genomic coordinates remapping tools? by
juliette • 20
I understand that, however I'm in the process of developing a remapping tool that doesn't use cha...
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I am not sure how much of a difference the tools introduce, especially for single-nucleotide posi...
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Thanks, I save this plot as PDF file (large size) and then zoom in to get the outlier samples. It...
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RamRS ♦ 22k
Please do not add Answers, they do not serve any purpose on a Tutorial type post.
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The benefit of MondoDB is that it's schema-less, but that is also its flaw. You can store anythin...
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juliette • 20
I do have the genomes in fasta files as well, I was just specifying what data I'm working on. Thi...
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Gabriel • 30
Yes! Exactly because of this I was asking again! Thanks [juliette][1]! [1]: https://www.bios...
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