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<prev • 556 results • page 1 of 19 • next >
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biopython esearch not giving all children taxIDs
ncbi biopython entrez written 2 days ago by yarmda • 0 • updated 2 days ago by Renesh • 910
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72
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Mapping PFAM Coordinates to RefSeq
ncbi refseq pfam written 3 days ago by vsivaranjanipriya • 10
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86
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SRAtoolkit: error while running sam-dump
ncbi sra sam sratoolkit written 3 days ago by chahatupretiiitk • 20
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116
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Assembly Id to UCSC names
ncbi ensembl ucsc written 8 days ago by ypriverol • 0
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2
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818
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2
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run BLASTn remotly
ncbi blast blastn written 18 months ago by arfaj a • 10 • updated 9 days ago by cedric.laczny • 30
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2
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186
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Retrieve all ids from NCBI
ncbi written 12 days ago by ypriverol • 0 • updated 12 days ago by Pierre Lindenbaum ♦ 98k
71
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6
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23 follow
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Parsing Ncbi Taxonomic Tree?
ncbi python taxonomy tree written 5.9 years ago by Prohan • 340 • updated 13 days ago by Biostar ♦♦ 20
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192
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automated SRA annotaion/Accession List
ncbi sra run selector rna-seq written 4 months ago by cakesebastian • 0 • updated 15 days ago by hh.earlydays • 0
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1
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120
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1
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Lowest common ancestor for taxonomy
ncbi lca taxonomy tree written 20 days ago by David • 60 • updated 20 days ago by Brian Bushnell ♦ 14k
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107
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1
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NCBI CDS(total) and genes (coding)
ncbi written 26 days ago by sharmatina189059 • 0 • updated 26 days ago by Jean-Karim Heriche ♦ 13k
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2
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280
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How to download all the protein sequences (FASTA files) that contain a specific short sequence of amino acids on NCBI, such as AKIAE. How to achieve this efficiently on NCBI?
ncbi protein written 4 weeks ago by taojincs • 0 • updated 4 weeks ago by Elisabeth Gasteiger • 1.2k
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1.5k
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2
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Identical Queries On Ncbi Gene And Protein Databases Returns Fewer Results From The Gene Database.
ncbi database search written 5.0 years ago by Michael Barton • 1.8k • updated 4 weeks ago by Biostar ♦♦ 20
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4
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4
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Programatically retrieving CLINVAR records, with the same detail level as it is seen in the web interface
ncbi api written 2.5 years ago by ersenkavak • 10 • updated 5 weeks ago by Biostar ♦♦ 20
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405
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9 follow
1
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Download NCBI genomes using taxonomy id (taxid)
ncbi python efetch biopython written 5 months ago by David • 60 • updated 5 weeks ago by pedrorodrigues • 10
3
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2
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338
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2
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How to find a random set of proteins which are not in your target set?
ncbi protein search random null set written 6 weeks ago by mcc • 80 • updated 6 weeks ago by Bioaln • 210
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1
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229
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1
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Error in fetching the Refseq using Taxonomic ID
ncbi eutility reference sequence written 7 weeks ago by Paul • 50
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2
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231
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2
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ncbi error C++ exception
ncbi blast written 8 weeks ago by bitpir • 30
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2
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1.0k
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7 follow
2
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Extract all bacteria sequences from the nr database
ncbi nr database bacteria written 7 months ago by Yi-Ting Liu • 30 • updated 8 weeks ago by jgl4 • 0
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158
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Bioperl - how can i print first result of result sequence per iteration?
ncbi protein sequence bioperl query written 8 weeks ago by Xylanaser • 10 • updated 8 weeks ago by Neilfws ♦ 47k
0
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1
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179
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1
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Errors with Mytaxa online program
genome mytaxa database blastp ncbi written 8 weeks ago by Kari Vázquez • 0
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2
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182
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5 follow
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how to extract protein info for a bunch of IDs
ncbi protein uniprot written 10 weeks ago by Learner • 70 • updated 8 weeks ago by Elisabeth Gasteiger • 1.2k
9
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715
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7 follow
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Tutorial: How to upload your RNA-Seq data to NCBI Sequence Read Archive (SRA)
ncbi sra tutorial biosample bioproject written 6 months ago by CandiceChuDVM • 1.3k • updated 9 weeks ago by Lucila • 10
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1
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207
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1
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Human in NCBI Genomes
genome ncbi human written 10 weeks ago by int11ap1 • 300 • updated 10 weeks ago by haro • 170
1
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1
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232
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1
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get gene annotation for nucleotide sequence of the NCBI RefSeq database
gene ncbi annotation cds dna written 11 weeks ago by dabid • 0
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287
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Get all hits from BLAST api
ncbi alignment sequence blast written 6 months ago by talalamin • 0 • updated 10 weeks ago by Biostar ♦♦ 20
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14 follow
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Bulk Download Of Ncbi Gene "Summary" Field
gene ncbi written 7.1 years ago by David Quigley ♦ 10k • updated 10 weeks ago by krassowski.michal • 0
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179
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Species representtation of the NCBI RefSeq for simulated reads
ncbi genome simulated data dna written 3 months ago by dabid • 0 • updated 11 weeks ago by Biostar ♦♦ 20
3
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1
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193
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1
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Entrez esearch term format
ncbi taxonomy esearch entrez biopython written 11 weeks ago by smiller • 50
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225
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Getting multiple *.sra files from NCBI using a list
ncbi sra written 11 weeks ago by chrys • 30
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4
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880
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7 follow
4
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Blastp Error 303.7
ncbi blastp written 8 months ago by stamakro • 20 • updated 11 weeks ago by larvalanobium • 20
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