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How to convert Ensemble ID to NCBI ID
gene ncbi ensemble_id written 4 hours ago by Shelle • 0
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0
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47
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0
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Command-line input for 'short queries' in blastp using Geneious
ncbi command line geneious blastp short queries written 12 hours ago by jan_raschke • 0
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173
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Taxonomy problems on algae: Is Cryptophyta a Phylum or a Class rank?
ncbi algaebase cryptophyta taxonomy phylum written 6 weeks ago by christophe.djemiel • 0 • updated 2 days ago by Biostar ♦♦ 20
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183
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How can I submit paired-end SRA data to NCBI?
ncbi sra written 11 days ago by MAPK • 1.3k • updated 4 days ago by Biostar ♦♦ 20
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0
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643
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GEO submission for small RNA
geo ncbi small rna written 2.6 years ago by #### • 170 • updated 4 days ago by Ram ♦ 17k
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1
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99
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1
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how to concatenate contigs from repseq?
ncbi refseq concatenate written 6 days ago by bitpir • 90 • updated 6 days ago by h.mon ♦ 19k
2
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1
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86
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1
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how to download all protein sequnces of a bacteria using ncbi ftp site?
ncbi written 6 days ago by sharmatina189059 • 30 • updated 6 days ago by jrj.healey ♦ 6.7k
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3
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5 follow
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Ncbi Esearch :Searching For Snp/Genes/... At In A Given Segment Chr:Start-End ?
ncbi search eutils written 8.3 years ago by Pierre Lindenbaum ♦ 112k • updated 10 days ago by Ram ♦ 17k
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2
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486
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2
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Problem in processing SRA file from NCBI
ncbi sra written 10 months ago by majeedaasim • 20 • updated 12 days ago by gtrwst9 • 0
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1
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NCBI protein IDs convert to gene IDs and then gene sequences
ncbi id written 4.1 years ago by biolab • 1.0k • updated 13 days ago by finswimmer ♦ 5.3k
3
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1
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120
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1
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Retrieve genome in fasta format from ncbi
genome ncbi biopython written 14 days ago by tim.ivanov.92 • 0
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61
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tblastn cuts querry even when alligment cut be better if extended
ncbi tblastn blast written 20 days ago by john • 60
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1
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126
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1
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get bacteria data from NT database
ncbi nt written 27 days ago by agata88 • 730 • updated 27 days ago by genomax ♦ 55k
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188
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2
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Retrieve gene length and cds locus informartion
ncbi batch_entrez written 4 weeks ago by MAPK • 1.3k • updated 4 weeks ago by genomax ♦ 55k
7
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1
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173
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1
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What does "." mean in transcript ID?
ncbi ensembl transcript written 5 weeks ago by Jenny Han • 10 • updated 5 weeks ago by finswimmer ♦ 5.3k
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124
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0
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SeqinR socketConnection error? (I tried increasing timeout & opening port already)
ncbi sequence seqinr accession written 6 weeks ago by david.h.halvorsen • 0
20
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4
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10 follow
4
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Looking For A Command Line Version Of Ncbi Taxonomy 'Stratification' Tool
ncbi taxonomy pipeline tool blast written 6.7 years ago by Daniel • 3.6k • updated 6 weeks ago by gtrwst9 • 0
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108
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Differences of taxid and species_taxid in assembly_summary.txt
genome assembly refseq ncbi written 8 weeks ago by xieshaojun0621 • 90
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241
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0
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NCBI esearch for cited papers with public SRA data
ncbi sra esearch entrez written 8 weeks ago by Jeremy Leipzig ♦ 17k
4
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1
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193
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1
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I want Blast old
ncbi blastall blast written 8 weeks ago by betoven966 • 0 • updated 8 weeks ago by h.mon ♦ 19k
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2
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238
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5 follow
2
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How to download large protein data from NCBI?
ncbi database proteins download written 11 weeks ago by enriqp02 • 0 • updated 11 weeks ago by tdmurphy • 110
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218
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5 follow
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Using NCBIs EDirect to download pubmed abstract
ncbi edirect tool pubmed written 12 weeks ago by zorn21g • 0 • updated 12 weeks ago by finswimmer ♦ 5.3k
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1
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255
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1
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How to change the type of the returned accession number
ncbi accession number type perl written 3 months ago by erans995 • 0
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0
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121
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0
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Downloading NCBI data with geographic location tag
genome gene sequence ncbi downloading data written 3 months ago by Willian Klassen de Oliveira • 0
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169
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0
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Job: dbGaP Phenotypes Curator Opening at Computercraft (NCBI/NIH) in Bethesda, MD, USA
ncbi job phenotype dbgap genomic genotype written 3 months ago by jyu • 0
2
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1
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211
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1
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BioPython BLAST Records HSP Sequences
ncbi biopython blast sequences written 3 months ago by samvanstroud • 0 • updated 3 months ago by Gungor Budak • 230
2
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1
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214
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1
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wonderdump.sh and FTP site URL conventions for SRR identifiers
ncbi ftp convention sra wonderdump written 3 months ago by manuel.belmadani • 60
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2
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199
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2
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Get number of available genomes per taxon - NCBI
ncbi genome written 3 months ago by tlorin • 240
2
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1
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260
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1
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Perl script to download gene sequences
gene perl sequence ncbi written 3 months ago by dllopezr • 20 • updated 3 months ago by WouterDeCoster ♦ 32k
4
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2
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170
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2
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Faster alternative of NCBI eutils
ncbi python api written 3 months ago by arup • 480 • updated 3 months ago by genomax ♦ 55k
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