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What training dataset was used for the NCBI Glimmer web server?
ncbi gene finding glimmer written 4.4 years ago by blrhgeruser1 • 40 • updated 23 hours ago by ojelizodun • 0
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How to convert data from NCBI E-utilities.efetch to python data object?
ncbi python written 1 day ago by MatthewP • 30 • updated 1 day ago by finswimmer ♦ 9.0k
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Bulk download of entire BioProject SRA
ncbi sra sratoolkit entrez utilities bioproject written 2 days ago by Anand Rao • 200
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105
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Trimming sequences based on NCBI contamination screen report
ncbi assembly transcriptome written 3 days ago by T_18 • 20
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95
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What is the best way to get all human genes(name/UID) ?
gene ncbi written 6 days ago by MatthewP • 30
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101
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Getting GFF annotation from sequence coordinates.
ncbi python gff gene annotation written 11 days ago by jsporter • 60
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113
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Batch Retrieval of Conserved Domains from a List of IDs?
ncbi entrez conserved domain written 12 days ago by kayrouz.1 • 0 • updated 12 days ago by vkkodali • 870
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How to download all the parasite protein data from NCBI?
ncbi parasite protein written 2.0 years ago by najibveto • 30 • updated 13 days ago by Biostar ♦♦ 20
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all by all phylogenetic distances for massive set of ncbi taxon ID's
phylogeny ncbi taxonomy taxon id microbiology written 18 days ago by bioguy • 20 • updated 18 days ago by i.sudbery ♦ 3.2k
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Job: dbGaP Phenotypes Curator
ncbi database dbgap phenotype job curator written 4 weeks ago by jyu • 10
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Downloading single cell data from NCBI
ncbi fastq-dump rna seq single cell written 4 weeks ago by V • 100
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11
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16 follow
11
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Bulk Download Of Ncbi Gene "Summary" Field
gene ncbi written 8.4 years ago by David Quigley ♦ 11k • updated 4 weeks ago by hsiaoyi0504 • 40
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136
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extract EC number from entrez esearch query
ncbi protein entrez genomics ecid written 4 weeks ago by bioguy • 20
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Filter the non-redundant NCBI database based on taxonomy
ncbi genebank database written 5 weeks ago by dieunelderilus • 0 • updated 5 weeks ago by vkkodali • 870
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How to set up Swissprot database for ncbi-blast+ using anaconda
ncbi ubuntu anaconda blast written 5 weeks ago by nazza2008 • 0 • updated 5 weeks ago by h.mon ♦ 22k
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Extracting specific metadata from SRA runs
ncbi sra sradb genomics metadata written 20 months ago by Gon • 10 • updated 5 weeks ago by Rob • 0
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1
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111
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1
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The correct way to build search term for high-specificity search in NCBI (nuccore)
ncbi search written 5 weeks ago by chun.c.yeung • 0 • updated 5 weeks ago by vkkodali • 870
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130
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1
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Convert NCBI SRA data to gene expression data
genome ncbi alignment rna-seq written 6 weeks ago by Django • 30
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2
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224
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2
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NCBI Accession Number to Taxonomy ID
ncbi 16s blast written 6 weeks ago by mrsmith • 0 • updated 6 weeks ago by vkkodali • 870
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1
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159
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1
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How to retrieve information on bacterial source from NCBI?
ncbi bacteria isolationsource retrieve written 7 weeks ago by saadleeshehreen • 60 • updated 7 weeks ago by vkkodali • 870
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130
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1
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How to link the assembly accession with the chromosome accession for prokaryotic representative genomes
ncbi prokaryotic genomes written 8 weeks ago by wangdp123 • 140
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110
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Gene Expression time series data
gene genome circadian ncbi written 8 weeks ago by jarintasnim.j • 0
3
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1
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224
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1
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Tutorial: NCBI submissions: SRA and TSA
ncbi sra tsa tutorial rna-seq written 8 weeks ago by saraoppenheim • 30
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166
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1
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How do I extract taxonomy/organism from NCBI .gb files?
ncbi written 9 weeks ago by Ming • 0 • updated 8 weeks ago by Sej Modha ♦ 4.0k
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How to Determine Which Bacterial Assembly to Use from NCBI database?
ncbi assembly written 9 weeks ago by zuhaibzulfiqarahmed • 0
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136
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NCBI analyze dataset
ncbi R geoquery biobase written 9 weeks ago by lvitale • 0
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119
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How to query taxonomy ID using protein accession ID in NCBI or Uniprot?
ncbi taxonomy uniprot written 9 weeks ago by johnnytam100 • 100
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149
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SRA archive metadata
ncbi sra sra-toolkit written 10 weeks ago by tim.ivanov.92 • 10 • updated 10 weeks ago by vkkodali • 870
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158
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Complete list of rs ids and thier corresponding sequence for the human genome
genome ncbi snp written 11 weeks ago by Uday Rangaswamy • 100 • updated 11 weeks ago by finswimmer ♦ 9.0k
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Is there any written script to extract Organism name,SRA information and Assembly from accession id?
ncbi assembly extractinformation written 12 weeks ago by saadleeshehreen • 60
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