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NCBI EUtils: identifying projects with both NGS and Sanger sequencing
ncbi data type eutils written 3 hours ago by sovrappensiero • 10
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Elink to get PMID associated with a BioProject or SRA entry
ncbi bioproject eutils pmid pubmed written 1 day ago by sovrappensiero • 10 • updated 1 day ago by Istvan Albert ♦♦ 85k
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esearch error "WebEnv value not found in search output - WebEnv1 Db value not found in fetch input" though search process continues
ncbi esearch entrez genbank written 1 day ago by rob_DNA • 0
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Download ncbi database with filezilla
ncbi nt written 5 days ago by anasofiamoreira94 • 70 • updated 5 days ago by Istvan Albert ♦♦ 85k
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How to download all Pseudomonas aeruginosa Genomes from NCBI Genomes database?
ncbi database genome assembly download written 6 days ago by Optimist • 90 • updated 5 days ago by vkkodali • 2.1k
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Comparative Genomics - Make phylogenetic tree of species with available NCBI genomes
genome ncbi phylogenetics comparative written 3.9 years ago by dacotahm • 20 • updated 6 days ago by fconstancias • 0
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Funny name or unsublte hacker?
ncbi written 9 days ago by angus • 0 • updated 9 days ago by Istvan Albert ♦♦ 85k
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Where can I get the old version of NCBI NR database?
ncbi nr blast2go written 10 days ago by 956120746 • 0
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retrieve the properties of the reads on NCBI on the command line
reads assembly ncbi written 12 days ago by Chvatil • 50
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Free PMC Article access through FTP service - NCBI
ncbi entrez biopython pmc pubmed written 16 days ago by vighnesh202 • 0
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SRA file upload in NCBI (error in organism name options in attributes)
ncbi sra uploading sequencing written 17 days ago by Shaminur • 60
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Kraken2 Error in buildind NCBI bacterial database
ncbi refseq sequencing written 19 days ago by Shaminur • 60
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Access NCBI blast through command line without downloading entire nr database?
ncbi blast written 19 days ago by allison.sharrar • 0 • updated 19 days ago by genomax ♦ 91k
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Message ID#30 Error: Subject string not found in the CGI context
ncbi error primer sequence written 23 days ago by Giorgia • 0
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NCBI E-utilities API function esearch not working
ncbi written 27 days ago by mavershang • 50 • updated 27 days ago by Pierre Lindenbaum ♦ 131k
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Intall MAGIC-BLAST in Ubuntu from BASH SHELL in windows powershell.
ncbi ubuntu magicblast powershell linux written 27 days ago by jjvelazcoa • 0
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download protein sequences from NCBI
fasta ncbi protein written 4.2 years ago by guillaume.rbt • 830 • updated 29 days ago by Kevin Blighe ♦ 66k
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How would I use BioPython to mass download some assemblies from NCBI?
ncbi biopython written 4 weeks ago by Tom • 20 • updated 4 weeks ago by genomax ♦ 91k
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Batch Entrez outputs nothing
ncbi batch entrez written 5 weeks ago by antoinefelden • 30 • updated 4 weeks ago by genomax ♦ 91k
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efetch results incomplete
ncbi e-utility efetch esearch entrez written 4 weeks ago by j.j.e.vanhooff • 0
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In Need of Help with NCBI Database
ncbi mutation entrez snp written 5 weeks ago by deemassh • 0 • updated 5 weeks ago by h.mon ♦ 31k
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In NCBI names.dmp file what does it mean to have multiple nodes pointing to different names?
ncbi names.dmp taxonomy nodes.dmp written 5 weeks ago by psun • 0
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Error while converting sra to fastq
ncbi sra fastq dna written 6 weeks ago by gunavaran.15 • 0
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How to decompress the nr database from NCBI
ncbi local blast genbank written 6 weeks ago by albagg1396 • 0 • updated 6 weeks ago by genomax ♦ 91k
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how to calculate or find the ratio between two data base in NCBI blastn?
ncbi database ratio realtion between two database written 6 weeks ago by imroshan7868 • 0
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News: New web BLAST default parameters and search limits are now in place at NCBI
www-blast ncbi news blast written 4 months ago by genomax ♦ 91k
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Is there a way to limit the number of returned efetch (text, tabular) terms with just the entrez api (not entrez direct)
ncbi entrez eutils written 7 weeks ago by DNAlias • 10
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Mapping NCBI gene id with Bioproject id
ncbi gene api expression entrez written 7 weeks ago by preethibagopi28 • 0
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A problem with download SRA using SRA toolkit
ncbi sra sra toolkit configuration written 8 months ago by reza • 230 • updated 7 weeks ago by eynardrenaud • 0
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What does it mean when a gene has an exon count of 0 on the ncbi database?
ncbi introns written 8 weeks ago by DNAlias • 10
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