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<prev • 544 results • page 1 of 19 • next >
0
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126
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5 follow
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how to extract protein info for a bunch of IDs
ncbi protein uniprot written 10 days ago by Learner • 70 • updated 11 hours ago by Elisabeth Gasteiger • 1.1k
8
votes
1
answer
485
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7 follow
1
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Tutorial: How to upload your RNA-Seq data to NCBI Sequence Read Archive (SRA)
ncbi sra tutorial biosample bioproject written 4 months ago by CandiceChuDVM • 1.2k • updated 7 days ago by Lucila • 0
1
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1
answer
128
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1
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Human in NCBI Genomes
genome ncbi human written 12 days ago by int11ap1 • 300 • updated 11 days ago by haro • 130
1
vote
1
answer
143
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1
answer
get gene annotation for nucleotide sequence of the NCBI RefSeq database
gene ncbi annotation cds dna written 20 days ago by dabid • 0
0
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0
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235
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Get all hits from BLAST api
ncbi alignment sequence blast written 4 months ago by talalamin • 0 • updated 14 days ago by Biostar ♦♦ 20
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10
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13 follow
10
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Bulk Download Of Ncbi Gene "Summary" Field
gene ncbi written 6.9 years ago by David Quigley ♦ 10k • updated 15 days ago by krassowski.michal • 0
0
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0
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135
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0
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Species representtation of the NCBI RefSeq for simulated reads
ncbi genome simulated data dna written 7 weeks ago by dabid • 0 • updated 17 days ago by Biostar ♦♦ 20
3
votes
1
answer
124
views
1
answer
Entrez esearch term format
ncbi taxonomy esearch entrez biopython written 20 days ago by smiller • 50
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0
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142
views
0
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Getting multiple *.sra files from NCBI using a list
ncbi sra written 20 days ago by chrys • 30
3
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4
answers
659
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7 follow
4
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Blastp Error 303.7
ncbi blastp written 6 months ago by stamakro • 20 • updated 21 days ago by larvalanobium • 0
1
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1
answer
166
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1
answer
How to correctly use E-fetch from E-utilities?
ncbi sra e-utilities linux written 24 days ago by jaynaythan • 10
2
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1
answer
140
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1
answer
How to download metadata from the SRA?
ncbi sra metdata written 25 days ago by jaynaythan • 10
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0
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91
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0
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Get non redundant from Bacteria Archaea Fungi
ncbi rna-seq written 25 days ago by David • 50
5
votes
1
answer
241
views
6 follow
1
answer
Retrieve genbank viral genomes
genome viral ncbi genbank download written 27 days ago by erwan.scaon • 200
0
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1
answer
142
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1
answer
URL for NCBI Efetch + XML with full annotation table
ncbi xml efetch eutils annotation written 4 weeks ago by Pierre Lindenbaum ♦ 96k • updated 4 weeks ago by genomax ♦ 30k
1
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2
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2
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Retrieving CDS sequences NCBI
ncbi cds batch entrez fasta written 2.2 years ago by vigneshprbh37 • 10 • updated 6 weeks ago by Biostar ♦♦ 20
1
vote
1
answer
121
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1
answer
Meaning behind the path organization in NCBI ftp site
ncbi genome ftp written 6 weeks ago by Jacob • 0 • updated 6 weeks ago by Devon Ryan ♦ 69k
0
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0
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92
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0
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Retrieving SRA datasets for completed bacterial genomes
ncbi sra written 7 weeks ago by ThePresident • 40
8
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4
answers
132
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8 follow
4
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Splitting NCBI Accession ID
ncbi R accessionid blast python written 7 weeks ago by Promi • 10 • updated 7 weeks ago by Sej Modha • 1.5k
0
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1
answer
110
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1
answer
Get all bacterial protein sequences from Genbank but non redundant
ncbi bacteria protein written 9 weeks ago by mschmid • 90
5
votes
1
answer
148
views
1
answer
how to download all the complete genomes for mycobacteria from NCBI?
genome ncbi sequence written 7 weeks ago by Paul • 40 • updated 7 weeks ago by 5heikki ♦ 6.5k
7
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2
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209
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2
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NCBI vs Ensembl - which one to chose - for downloading protein fasta files
fasta ncbi blast ensembl written 8 weeks ago by Idit • 0 • updated 8 weeks ago by Jean-Karim Heriche ♦ 11k
3
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0
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123
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0
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Which files in the NCBI Genomes ftp site are the most reliable
genome ncbi sequence blast written 8 weeks ago by Jacob • 0
4
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2
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188
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2
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Getting sample information from GEO
geo ncbi written 8 weeks ago by Tom_L • 180
0
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101
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0
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How to track which protein ID is linked to which gene ID with rentrez
ncbi R rentrez written 9 weeks ago by s.herrera706 • 0
0
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0
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138
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0
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NCBI BLAST on AWS
ncbi aws blast written 9 weeks ago by philipp • 10
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124
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0
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Different results between local and online BLAST (RefSeq database)
ncbi blast written 9 weeks ago by philipp • 10
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250
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0
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makeblastdb doesn't create database output
makeblastdb fasta blast blast+ ncbi written 10 weeks ago by m.rhodes • 10 • updated 10 weeks ago by genomax ♦ 30k
1
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147
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makeblastdb error: Error: (803.7) [makeblastdb] Blast-def-line-set.E.seqid.E.local.str Bad char [0xC3] in string at byte 45
makeblastdb ncbi blast written 10 weeks ago by m.rhodes • 10 • updated 10 weeks ago by genomax ♦ 30k
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144
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0
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Downloading 'suspect' NCBI data with Eutils
ncbi xml genedocsum written 10 weeks ago by cheng#13# • 0
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