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<prev • 796 results • page 1 of 27 • next >
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Discrepancy in number of BLAST hits
ncbi alignment blast written 22 hours ago by georgeyates1994 • 0 • updated 21 hours ago by lakhujanivijay ♦ 4.6k
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1
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83
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Entrez Direct E-utilities on command line: efilter parameters for limiting efetch results
ncbi biosample efetch elink efilter written 5 days ago by sovrappensiero • 10 • updated 5 days ago by genomax ♦ 74k
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Understanding the annotation tag
ncbi annotation ucsc written 6 days ago by surajbhattarai2013 • 0
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61
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Entrez Direct: epost removes duplicates
entrez direct ncbi epost written 8 days ago by jaydu • 0 • updated 8 days ago by vkkodali • 1.4k
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NCBI GEO: Empty FTP directory!
geo ncbi written 8 days ago by mirzaienahal • 0
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71
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NCBI e-utilities: timeout and restart
ncbi esummary esearch efetch e-utilities written 9 days ago by joe • 120
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NCBI vs Liftover vs ENSEMBL for Assembly Conversion for SNP data (GRCh37 to GRCh38)
ncbi assembly snp liftover ensembl written 19 days ago by sarvism • 0
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71
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Download multiple bacterial CDS from NCBI using Biopython
ncbi cds biopython written 19 days ago by lisssanka • 0
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2
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104
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How to get a list of snp associated with any known cancer from NCBI with chromosomal locations?
ncbi circulargenome circos snp cancer written 20 days ago by mrj • 0 • updated 20 days ago by jared.andrews07 • 4.0k
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1
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121
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1
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NCBI rRNA sequence search
genome ncbi written 26 days ago by bojkem91 • 0 • updated 26 days ago by vkkodali • 1.4k
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1
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106
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1
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GEOquery with local files
ncbi R geoquery geo written 27 days ago by kmyers2 • 30 • updated 27 days ago by MatthewP • 290
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1
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103
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1
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Retrieving sequence from NCBI
ncbi list blast written 27 days ago by ashaneev07 • 10 • updated 27 days ago by JC ♦ 9.1k
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3
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5 follow
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How to obtain the chromosome out of an accession number?
genome ncbi chromosome refseq accession written 18 months ago by eidriangm • 0 • updated 28 days ago by vkkodali • 1.4k
3
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1
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255
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Is there a "default" RefSeq transcript for genes?
ncbi mrna refseq transcript written 5 months ago by ludovic.malet • 0 • updated 28 days ago by vkkodali • 1.4k
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110
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Get genomes in genbank that are NOT in RefSeq
genome ncbi refseq genbank written 29 days ago by rororo • 0 • updated 28 days ago by vkkodali • 1.4k
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2
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124
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2
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NCBI gene Dabase info extration
ncbi gene databe gene ontology written 28 days ago by Shahzad • 10 • updated 28 days ago by vkkodali • 1.4k
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2
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87
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2
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Recover from protein ID the corresponding nucleotide ID .
fasta python ncbi written 29 days ago by Darill • 30 • updated 29 days ago by massa.kassa.sc3na • 160
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83
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fetch all relevant datasedts from GEO database
geo ncbi eutils written 4 weeks ago by APJ • 20
3
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1
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184
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1
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Missing GenBank identifier to NCBI taxonomy mapping
ncbi taxonomy genbank written 5 weeks ago by martinsteinegger • 30 • updated 5 weeks ago by h.mon ♦ 28k
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1
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137
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1
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Error: NCBI C++ Exception - Invalid choice selection: NCBI-Seqalign::Score.value.real
ncbi software error blast terminal seqalign written 7 weeks ago by mrmrwinter • 0 • updated 5 weeks ago by joines • 20
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1
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338
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1
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NCBI blastp fails with "Invalid choice selection: NCBI-Seqalign::Score.value.real"
ncbi blast peptide written 3 months ago by claudius.mueller • 0 • updated 5 weeks ago by joines • 20
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4
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137
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5 follow
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map refseq to identical genbank
ncbi assembly refseq genbank written 7 weeks ago by cmo • 60
2
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95
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Tool: PipeTaxon: A tool to exposes the NCBI taxonomy database as a REST API.
ncbi python taxonomy tool written 5 weeks ago by voorloopnul • 40
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1
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99
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1
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How to download genome via Entrez
ncbi entrez fetch written 5 weeks ago by DNAlias • 0 • updated 5 weeks ago by massa.kassa.sc3na • 160
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99
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16S NCBI database to train feature classifier
ncbi amplicon 16s classifier written 6 weeks ago by kaanb93 • 0
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130
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Remove bacteria data from nt database
ncbi nt written 6 weeks ago by anasofiamoreira94 • 50
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157
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Download RunInfo Table from command line
entrez direct ncbi written 10 weeks ago by joshua.theisen • 0 • updated 6 weeks ago by Biostar ♦♦ 20
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139
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0
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Generating a list of all GI numbers for a genome
ncbi written 6 weeks ago by DNAlias • 0 • updated 6 weeks ago by yehchan57 • 10
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131
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0
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Which file should I use to retrieve CDs following the GenBank Assembly link? No RefSeq available.
ncbi assembly refseq gbff cds written 6 weeks ago by andrespara • 10
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Comparative Genomics - Make phylogenetic tree of species with available NCBI genomes
genome ncbi phylogenetics comparative written 3.0 years ago by dacotahm • 20 • updated 6 weeks ago by Juke-34 • 2.9k
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