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<prev • 761 results • page 1 of 26 • next >
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Get cDNA sequences from NCBI for given protein IDs
ncbi cdna proteinid written 3 hours ago by Chirag Parsania • 1.5k
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Blastn against multiple fna files --neither makeblastdb nor for loop works
ncbi fasta blast fna blastn written 4 weeks ago by Metaxo • 0 • updated 1 day ago by h.mon ♦ 26k
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NCBI blastp fails with "Invalid choice selection: NCBI-Seqalign::Score.value.real"
ncbi blast peptide written 2 days ago by claudius.mueller • 0
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Submitting many transcriptomes to TSA - how to automatize?
ncbi submition tsa database transcriptome written 3 days ago by al-ash • 110
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152
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obtaining fastq files from NCBI
genome ncbi sratoolkit written 13 days ago by truebeliever24 • 20
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78
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Mapping NCBI Genome Accessions - NCBI Taxonomy IDs
genome ncbi taxonomy genbank written 5 days ago by mar.ark.parr • 30 • updated 5 days ago by genomax ♦ 70k
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90
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Duplicates in Biomart Query, Ensembl ID maps to multiple Entrez genes.
ncbi ensembl biomart written 13 days ago by adam.faranda • 10
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NCBI SRA AWS AMI
ncbi sra aws s3 written 13 days ago by joe • 40 • updated 13 days ago by Sean Davis ♦ 25k
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120
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PacBio file type from NCBI run download
ncbi sra pacbio written 13 days ago by joe • 40
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120
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what is the difference between /refseq/release and /genomes/refseq
ncbi genome refseq ftp fasta written 16 days ago by tastafor • 0
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Submit paired bacterial chromosome and plasmid scaffolds to NCBI?
genome assembly sequence submission ncbi written 16 days ago by causland • 0
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256
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error while downloading taxonomy using E-utilities
software error ncbi amplicon sequencing bash written 27 days ago by Bioinfonext • 150 • updated 27 days ago by genomax ♦ 70k
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73
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want to make COG ANNOTATION
ncbi annotation proteins seq cog written 5 weeks ago by chaudharynaveen.999 • 0
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How to obtain the chromosome out of an accession number?
genome ncbi chromosome refseq accession written 15 months ago by eidriangm • 0 • updated 6 weeks ago by Solowars • 50
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119
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How to extract all annotations in a genomic range from NCBI using R?
ncbi R comparative genomics rentrez synteny written 6 weeks ago by Solowars • 50
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123
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Retrieving organism name
ncbi assembly e-utlilities written 6 weeks ago by saadleeshehreen • 60 • updated 6 weeks ago by SMK • 1.8k
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119
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1
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Gene symbols of different species
gene symbols ncbi rna-seq written 6 weeks ago by RPuni • 0
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5 follow
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Retrieve genome in fasta format from ncbi
genome ncbi biopython written 11 months ago by tim.ivanov.92 • 10 • updated 6 weeks ago by atiestorage • 0
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213
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What is the difference between blastx and tblastn?
ncbi bioinformatics sequence blast assembly written 8 weeks ago by Dineshkumar K • 10 • updated 7 weeks ago by tim.nollan25 • 0
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135
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How to find the sequence upstream and downstream of a gene in NCBI
ncbi gene written 7 weeks ago by ginohino • 0
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90
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SeqIO.index does not contain all records downloaded from NCBI
ncbi sequence biopython genbank written 7 weeks ago by stueckmann.daniel • 0
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104
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NCBI expect value
ncbi expect value written 7 weeks ago by genomics Newbie • 20
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5 follow
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How to get nuclear and mitochondrial gene sequences ?
ncbi sequence mitochondrial genes written 8 weeks ago by kA • 0 • updated 8 weeks ago by genomax ♦ 70k
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How to limit sequences downloaded from NCBI to published data only
ncbi next-gen esearch reference sequences written 9 weeks ago by sbombin • 10
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173
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1
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HTTP 400: Bad request error in Biopython Entrez.efetch
ncbi python biopython entrez sequences written 9 weeks ago by Solowars • 50
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191
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Is there a "default" RefSeq transcript for genes?
ncbi mrna refseq transcript written 10 weeks ago by ludovic.malet • 0
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154
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1
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Diamond results non-specific compared to NCBI Web
ncbi blast diamond blastp written 11 weeks ago by gwrathe • 0 • updated 11 weeks ago by buchfink • 140
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214
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Fastq-dump error time exhausted
ncbi fastq rna-seq written 3 months ago by bharata1803 • 420
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2
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231
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retrieving only one result using entrez direct
ncbi edirect written 3 months ago by Lille My • 30 • updated 3 months ago by vkkodali • 1.1k
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314
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NCBI ORFfinder - How Does It Work
ncbi written 3 months ago by A Soggy Waffle • 0 • updated 3 months ago by h.mon ♦ 26k
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