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2
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135
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Get species/genus names from NCBI nr protein accession IDs for phylogenetic tree annotation?
ncbi sequence written 2 days ago by izhang • 0
1
vote
1
answer
45
views
1
answer
What types of acc. no. exist?
acc. no. accession number ncbi written 2 days ago by 6schulte • 20 • updated 2 days ago by GenoMax ♦ 94k
13
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1
answer
2.2k
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9 follow
1
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NCBI SRA AWS AMI
ncbi sra aws s3 written 17 months ago by joe • 170
4
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2
answers
71
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2
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Can't download some proteins using Entrez
ncbi genbank entrez blast written 6 days ago by gabrielpoccia • 0 • updated 6 days ago by Pierre Lindenbaum ♦ 133k
1
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1
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3.1k
views
1
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Automated Snp Lookup Based On Chr And Bp-Position
ncbi snps snp written 7.6 years ago by bdeonovic • 180 • updated 7 days ago by Biostar ♦♦ 20
2
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1
answer
79
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1
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bash find consecutive acc. no. & insert text
ncbi efetch bash acc.no. written 8 days ago by 6schulte • 20
7
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2
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158
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2
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mRNA Translation: TGG/UGG as a start codon?
ncbi mrna codons translation written 12 days ago by rebelCoder • 20 • updated 12 days ago by Istvan Albert ♦♦ 86k
0
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0
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110
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0
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How to download sequence of a protein from all available species from NCBI?
ncbi R sequence protein written 14 days ago by arijitghosh2009 • 0
3
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2
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1.4k
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2
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How to keep my data and analysis up to date across new genome releases
ncbi uniprotkb database pdb written 6.7 years ago by Sheila • 250 • updated 18 days ago by Biostar ♦♦ 20
6
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2
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120
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2
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Number of Entries in Non Redundant DB
ncbi nr written 22 days ago by 6schulte • 20
0
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1
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125
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1
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Description of nt database from NCBI
ncbi database written 4 weeks ago by anasofiamoreira94 • 70
0
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0
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114
views
0
answers
How to download NCBI nulceotide collection database
ncbi download written 4 weeks ago by jomagrax • 30
1
vote
1
answer
114
views
1
answer
NCBI server access via EDirect does not work
ncbi edirect cygwin written 6 weeks ago by geosmin • 0
1
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3
answers
169
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3
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Is there any tool/API available to convert GTF/GFF to JSON format?
gtf ncbi gff json ensembl written 6 weeks ago by lakhujanivijay ♦ 5.3k • updated 6 weeks ago by vkkodali • 2.4k
0
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0
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92
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0
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Submitting partial sequences from Cytb gene
ncbi bankit written 6 weeks ago by anasofiamoreira94 • 70
3
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1
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809
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1
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Forum: Strategies for group submisions to SRA (BioProject)
ncbi sra next-gen forum core facility archive written 2.3 years ago by A. Domingues • 2.4k
0
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0
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108
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0
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Appending sequences to downloaded NCBI nt database
ncbi makeblastdb blastdb_alias written 6 weeks ago by Biogeek • 400
3
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2
answers
163
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2
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Extract country information of a fasta sequence on NCBI website using renterz
ncbi R rentrez location written 6 weeks ago by kelvinfrog75 • 10 • updated 6 weeks ago by GenoMax ♦ 94k
0
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0
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146
views
0
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Submitting phage sequences to NCBI
ncbi sequencing written 7 weeks ago by anasofiamoreira94 • 70 • updated 7 weeks ago by GenoMax ♦ 94k
1
vote
1
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125
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1
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How do I download and set up a subset of a local database from NCBI?
ncbi blast+ local database written 7 weeks ago by geosmin • 0 • updated 7 weeks ago by 5heikki ♦ 9.2k
7
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5
answers
4.6k
views
5 follow
5
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Programatically retrieving CLINVAR records, with the same detail level as it is seen in the web interface
ncbi api written 5.8 years ago by ersenkavak • 10 • updated 7 weeks ago by ariel • 110
2
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0
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160
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0
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How do I configure blast+ to access databases on an external hard drive?
ncbi perl blast cmd blast+ written 7 weeks ago by geosmin • 0
0
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0
answers
144
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0
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News: New columns added to the web BLAST Descriptions Table including taxonomic info and sequence length
ncbi news blast written 7 weeks ago by GenoMax ♦ 94k
0
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0
answers
148
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0
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Download all CNV deletions at specified chromosomal locus
ncbi clinvar variation viewer cnv written 7 weeks ago by madison.elsaadi • 0
1
vote
1
answer
168
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1
answer
Trouble understanding "Join" operator of NCBI
ncbi gene gff3 written 8 weeks ago by Prasad • 1.6k • updated 8 weeks ago by Istvan Albert ♦♦ 86k
5
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3
answers
3.3k
views
3
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Makeblast Db Problem
makeblastdb ncbi blast written 10.3 years ago by Christiank • 70 • updated 8 weeks ago by Biostar ♦♦ 20
3
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1
answer
262
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1
answer
Prokka Annotation or NCBI Annotation
ncbi prokka genbank written 9 weeks ago by Optimist • 130 • updated 9 weeks ago by Mensur Dlakic • 8.2k
2
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0
answers
142
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0
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Sieving TFs from gene list
scrna-seq ncbi rna-seq genbank written 10 weeks ago by LacquerHed • 0
1
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0
answers
321
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0
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best automated method (unix commandline) to get genome-assembly-accession number for given protein-accession-number (ncbi)
ncbi assembly blast written 10 weeks ago by JV • 410
0
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0
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101
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0
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sequence assemblies with phenotype labels
ncbi assembly sequence sequencing written 10 weeks ago by Negin • 0
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