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1,188 results • Page
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580
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155
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89 follow
News:
The Biostar Handbook. A bioinformatics e-book for beginners.
handbook
tutorial
training
News
updated 1 day ago by
Biostar
10 • written 4.3 years ago by
Istvan Albert
87k
0
votes
0
replies
135
views
News:
Bioinformatics Open Source Conference 2021
OBF
BOSC
Conference
1 day ago by
Chris Fields
★ 2.2k
0
votes
0
replies
63
views
News:
Online training: Data Visualization with Python
Python
DataVisualization
2 days ago by
carlopecoraro2
★ 2.0k
0
votes
0
replies
151
views
News:
Online training - Network Analysis in R
R
NetworkAnalysis
5 days ago by
carlopecoraro2
★ 2.0k
1
vote
0
replies
570
views
News:
Webinar - Recent and upcoming enhancements in web BLAST and Primer-BLAST! (Wed, April 7, 2021 12:00 PM - 12:45 PM EDT)
primer-BLAST
blast
10 days ago by
GenoMax
99k
1
vote
0
replies
71
views
News:
SBGNview: Data Analysis, Integration and Visualization of All Pathways
SMPDB
PANTHER
Reactome
SBGNview
Pathview
10 days ago by
bigmawen
▴ 400
0
votes
0
replies
81
views
News:
3-day ONLINE TRAINING - NEXTFLOW
pipeline
programming
workflow
cloud
clustering
updated 13 days ago by
GenoMax
99k • written 13 days ago by
carlopecoraro2
★ 2.0k
0
votes
0
replies
131
views
News:
BioSoftics- An Innovative way to explore Science and Technology
Bioinformatics
genome
Biotechnology
14 days ago by
Asad Bilal
▴ 10
0
votes
0
replies
169
views
News:
:: FINAL CALL :: Online Course - A Practical Introduction to NGS Data Analysis (April 28 - 30, 2021)
NGS
DNA-Seq
Workshop
Mapping
RNA-Seq
13 days ago by
David Langenberger
9.6k
0
votes
0
replies
115
views
News:
Introduction to Deep Learning
Python
DeepLearning
MachineLearning
News
26 days ago by
carlopecoraro2
★ 2.0k
0
votes
0
replies
102
views
News:
Learn how to do modern reproducible data science
Snakemake
Nextflow
Workflows
Bionformatics
News
4 weeks ago by
carlopecoraro2
★ 2.0k
0
votes
0
replies
89
views
News:
Noncoding RNA conference (including bioinformatics)
conference
bioinformatics
RNA
noncoding RNA
News
4 weeks ago by
rory.johnson
▴ 20
0
votes
0
replies
88
views
News:
Spring Bioinformatics Courses @ Edinburgh Genomics
RNA-Seq
SNP
metagenomics
training
News
4 weeks ago by
Edinburgh Genomics Training
▴ 40
0
votes
1
reply
291
views
News:
Results are now Available for the precisionFDA Truth Challenge V2
genome
News
updated 4 weeks ago by
oneillkza
▴ 100 • written 8 months ago by
stephens_sarah
▴ 150
1
vote
0
replies
108
views
News:
Online Training - Analysis of Transposable elements
sequence
assembly
genome
News
5 weeks ago by
carlopecoraro2
★ 2.0k
0
votes
0
replies
112
views
News:
Three x 2day online Python courses
Python
News
5 weeks ago by
oliverhooker
▴ 60
0
votes
0
replies
114
views
News:
Nine x 2day online R courses
R
News
5 weeks ago by
oliverhooker
▴ 60
2
votes
0
replies
112
views
News:
Free Ensembl Browser and REST API virtual workshops in March
Ensembl
training
REST API
workshop
genome browser
News
updated 5 weeks ago by
GenoMax
99k • written 5 weeks ago by
Michal @Ensembl
▴ 90
5
votes
1
reply
441
views
News:
Paid opportunity: need microbiome experts for a survey and test of robustness
survey
News
6 weeks ago by
Jeremy Leipzig
20k
0
votes
1
reply
90
views
News:
The NCBI Datasets command-line tool now provides ortholog data
ncbi
gene
refseq
json
News
6 weeks ago by
e.cox
• 0
0
votes
0
replies
139
views
News:
5th Berlin Summer School in NGS Data Analysis 2021 (June 7-11)
RNA-Seq
DNA-Seq
NGS
Workshop
News
6 weeks ago by
David Langenberger
9.6k
0
votes
0
replies
126
views
News:
3-day ONLINE TRAINING - NEXTFLOW
Nextflow
workflow
Bioinformatics
News
8 weeks ago by
carlopecoraro2
★ 2.0k
0
votes
0
replies
129
views
News:
ONLINE training - Single-cell RNA-seq analysis with R/Bioconductor. 07-11 June
R
RNA-Seq
SingleCell
Bioconductor
News
8 weeks ago by
carlopecoraro2
★ 2.0k
3
votes
0
replies
191
views
News:
Online training - Unix and shell scripting for bioinformatics
Unix
Bioinformatics
scripting
Linux
News
10 weeks ago by
carlopecoraro2
★ 2.0k
0
votes
0
replies
138
views
News:
Cellosaurus release 37 is available
knowledgebase
databases
news
cell line
News
11 weeks ago by
Amos Bairoch
▴ 110
1
vote
1
reply
148
views
News:
ONLINE TRAINING -GENOME ASSEMBLY USING OXFORD NANOPORE SEQUENCING
assembly
genome
Nanopore
News
12 weeks ago by
carlopecoraro2
★ 2.0k
0
votes
0
replies
214
views
News:
DNA Methylation Data Analysis Workshop (April 12-15, 2021 in Berlin)
Epgenetics
Bisulfite
Methylation
News
12 weeks ago by
David Langenberger
9.6k
1
vote
0
replies
160
views
News:
Online training: Advanced Programming in R
R
Programming
News
12 weeks ago by
carlopecoraro2
★ 2.0k
0
votes
0
replies
147
views
News:
Tutorial on Detecting Structural Variants in ONT data
structural_variants
ONT
Tutorial
News
updated 12 weeks ago by
ATpoint
47k • written 12 weeks ago by
stephanie
• 0
0
votes
0
replies
325
views
News:
Online Workshop: Bioinformatics Pipeline Development with Nextflow (May 3-6, 2021)
Nextflow
NGS
pipeline
bioinformatics
News
3 months ago by
David Langenberger
9.6k
0
votes
0
replies
210
views
News:
Online Training - GENOME-WIDE PREDICTION OF COMPLEX TRAITS - Last days to apply
next-gen
SNP
genome
News
3 months ago by
carlopecoraro2
★ 2.0k
0
votes
1
reply
376
views
News:
:: LAST CALL :: Online Course - A Practical Introduction to NGS Data Analysis (March 1 - 3, 2021)
RNA-Seq
DNA-Seq
Workshop
News
3 months ago by
David Langenberger
9.6k
3
votes
0
replies
221
views
News:
ONLINE TRAINING: Environmental Metagenomics
assembly
metagenomics
nanopore
illumina
News
3 months ago by
carlopecoraro2
★ 2.0k
2
votes
0
replies
175
views
News:
ONLINE TRAINING - Web Applications Development with R Shiny
R
Shiny
News
3 months ago by
carlopecoraro2
★ 2.0k
0
votes
0
replies
182
views
News:
Online Training - An introduction to Nanopore direct RNA Sequencing - last 2 places left
RNA-Seq
rna-seq
Nanopore
News
3 months ago by
carlopecoraro2
★ 2.0k
2
votes
0
replies
209
views
News:
Online training - Computational Bayesian methods using brms in R
R
Bayesian
Statistics
News
4 months ago by
carlopecoraro2
★ 2.0k
0
votes
0
replies
191
views
News:
ONLINE training - Eukaryotic Metabarcoding
Metabarcoding
eDNA
News
4 months ago by
carlopecoraro2
★ 2.0k
0
votes
0
replies
213
views
News:
New columns added to the web BLAST Descriptions Table including taxonomic info and sequence length
blast
ncbi
News
4 months ago by
GenoMax
99k
2
votes
0
replies
194
views
News:
Nanopore direct RNA Sequencing course
RNA-Seq
Nanopore
News
4 months ago by
carlopecoraro2
★ 2.0k
0
votes
0
replies
353
views
News:
Online training - Proteomics in R and Bioconductor
Proteomics
R
Bioconductor
News
5 months ago by
carlopecoraro2
★ 2.0k
0
votes
0
replies
194
views
News:
Are Online Trainings for NGS Data Analysis as Effective as In-person Workshops?
DNA-Seq
RNA-Seq
Workshop
News
5 months ago by
David Langenberger
9.6k
0
votes
0
replies
201
views
News:
Cellosaurus release 36 is available
cell line
news
knowledgebase
database
News
5 months ago by
Amos Bairoch
▴ 110
8
votes
1
reply
2.1k
views
News:
An Interesting Article On Bioinformatics Education With Some Press For Biostar
biostar
News
written 7.7 years ago by
Mary
11k
0
votes
0
replies
262
views
News:
Online Training: Epigenomics
RNA-Seq
ChIP-Seq
next-gen
News
5 months ago by
carlopecoraro2
★ 2.0k
1
vote
0
replies
319
views
News:
UniProt survey: Tell us what protein information is important to you
uniprot
proteome
genome
database
News
5 months ago by
Elisabeth Gasteiger
★ 1.9k
0
votes
0
replies
169
views
News:
dbSNP/ALFA Video and Live Event (October 29, 2020 at 12noon EST)
SNP
genome
News
5 months ago by
lonphan
▴ 50
1
vote
0
replies
271
views
News:
NCBI Web BLAST now offers RefSeq Select databases for faster searches and better results
blast
News
5 months ago by
GenoMax
99k
0
votes
0
replies
274
views
News:
Online Training - GENOME-WIDE PREDICTION OF COMPLEX TRAITS IN HUMANS, PLANTS AND ANIMALS
sequencing
genome
News
5 months ago by
carlopecoraro2
★ 2.0k
2
votes
0
replies
221
views
News:
Get Ensembl training, virtually
ensembl
training
online
News
5 months ago by
Emily_Ensembl
22k
0
votes
0
replies
403
views
News:
Online Training - Nanopore direct RNA Sequencing
RNA-Seq
rna-seq
Nanopore
News
5 months ago by
carlopecoraro2
★ 2.0k
1,188 results • Page
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Recent Votes
Answer: What Do You Waste Your Time On
C: What Do You Waste Your Time On
What Do You Waste Your Time On
Answer: What Do You Waste Your Time On
Answer: What Do You Waste Your Time On
Answer: Microarray Error
Answer: Tool to find chromosome specific repeats
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Recent Replies
Comment: Using outgroup in gene family dendograms
by
Mensur Dlakic
★ 10k
> Wouldn't a gene that isn't an ABC superfamily member from some distant species suffice as an outgroup candidate here? Most definitely no…
Comment: Testing independence between 5' and 3' terminal sequences in a DNA database
by
Istvan Albert
87k
with that definition I would suspect that all of your sequences are "dependent", I would expect every functional DNA/RNA region to capture …
Comment: Taxonomy assignment of viral RNA
by
biobiu
▴ 120
Thanks! As for the blast option- (1) so do you suggest to just blast the contig against a db of viral RNAs? and (2) is there a comprehensiv…
Comment: Finding how many times a nucleotide appear in the same position
by
cpad0112
15k
#!/usr/bin/env python3 sequences = ["GAGGTAAACTCTG", "TCCGTAAGTTTTC", "CAGGTTGGAACTC", "ACAGTCAGTTCAC", "TAGGTCATTACAG", "TAGG…
Comment: Testing independence between 5' and 3' terminal sequences in a DNA database
by
Anand Rao
▴ 350
Thanks for your reply. Yes, I think I could have explained my problem much better, but rather than change my original post, I will add some…
Answer: Finding how many times a nucleotide appear in the same position
by
Dunois
▴ 600
Here's a little `python` function you can work off of: def count_quer_at_pos_in_seq(seqs, quer = "A"): #Initialize a list…
Comment: Using outgroup in gene family dendograms
by
Rogerio Ribeiro
▴ 50
Thank for the fast reponse. The ABC family is not the best example for this question indeed. The objective of my work is to find genes resp…
Answer: Taxonomy assignment of viral RNA
by
Zhilong Jia
★ 1.7k
1. Blast directly 2. [IDSeq][1], can get viral contigs and their annotation directly. [IDSeq : An open-source cloud-based pipeline and…
Comment: Finding how many times a nucleotide appear in the same position
by
hugo.avila
▴ 180
Hi, It is not a norm but it is a good practice to post an attempted resolution first and then other members try to correct it or suggest an…
Comment: What Do You Waste Your Time On
by
ponganta
▴ 150
Aye to the rushed analyses and the last-minute documentation. Horrible, but somehow it happens all the time.
Answer: What Do You Waste Your Time On
by
ponganta
▴ 150
Reinventing the wheel. Like, all the time. Why use clusterProfiler with an up-to-date GO-annotation, when you can just write your own clien…
Comment: RNAseq data analysis of pooled data
by
ponganta
▴ 150
By "pooled" data, do you mean data from tissue-specific bulk-RNAseq? Or did you pool single cell (SC) RNAseq-libraries?
Comment: RNAseq data analysis of pooled data
by
Dunois
▴ 600
What exactly do you mean by "pooled" data?
Answer: RNAseq data analysis of pooled data
by
grant.hovhannisyan
★ 2.1k
I made a tutorial last year for University students on this topic https://www.loom.com/share/a55c1dedb8e64e7cac47f6595b751de7. Let me know …
Comment: RNAseq data analysis of pooled data
by
luffy
• 0
@dunois Thank you for the tutorial, what are your thoughts for approach for pooled data? should i follow the documentation/the tutorial or …
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