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1,000 results • Page
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0
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172
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News:
Deep Learning in Population Genomics and Phylogeography
DeepLearning
Phylogeography
PopulationGenomics
12 weeks ago by
carlopecoraro2
★ 2.2k
0
votes
0
replies
192
views
News:
Metabarcoding in Microbial Ecology Workshop
Qiime2
R
Metabarcoding
Microbial-Ecology
3 months ago by
carlopecoraro2
★ 2.2k
1
vote
2
replies
295
views
News:
Gene Set Enrichment Analysis in R/Bioconductor
Gene-Set-Enrichment-Analysis
R
Cancer-Genomics
GSEA
3 months ago by
carlopecoraro2
★ 2.2k
0
votes
0
replies
192
views
News:
Analysis of RNA sequencing data with R/Bioconductor course.
Bioconductor
RNAseq
R
3 months ago by
carlopecoraro2
★ 2.2k
0
votes
0
replies
294
views
News:
Winter School in Bioinformatics
course
workshop
updated 8 weeks ago by
Ram
37k • written 3 months ago by
carlopecoraro2
★ 2.2k
1
vote
0
replies
265
views
News:
Introduction to Nextflow
Nextflow
updated 8 weeks ago by
Ram
37k • written 3 months ago by
carlopecoraro2
★ 2.2k
0
votes
2
replies
411
views
News:
Seascape Genomics in R
Genomics
Seascape
R
updated 8 weeks ago by
Ram
37k • written 3 months ago by
carlopecoraro2
★ 2.2k
0
votes
0
replies
189
views
News:
Bioinformatics courses in November
Bioconductor
Genomics
R
updated 8 weeks ago by
Ram
37k • written 3 months ago by
carlopecoraro2
★ 2.2k
0
votes
0
replies
223
views
News:
Flow cytometry analysis with R/Bioconductor course
Bioconductor
R
Cytometry
Flow
3 months ago by
carlopecoraro2
★ 2.2k
0
votes
0
replies
193
views
News:
course: RNA-seq analyses in non-model organisms
differential
Bioconductor
RNAseq
expression
non-model
organisms
analysis
R
3 months ago by
carlopecoraro2
★ 2.2k
0
votes
0
replies
216
views
News:
course - Developing R/Bioconductor packages for genomics
developing
package
Bioconductor
Genomics
R
4 months ago by
carlopecoraro2
★ 2.2k
2
votes
0
replies
228
views
News:
Four NCBI workshops in October (BLAST, Primer-BLAST, Metagenome analysis, Structures in iCn3D)
metagenomics
MagicBLAST
BLAST
NCBI
Primer-BLAST
4 months ago by
PeterC_NCBI
▴ 180
0
votes
0
replies
259
views
News:
course - Unix and shell scripting for bioinformatics
bash
Shell-scripting
Unix
updated 8 weeks ago by
Ram
37k • written 4 months ago by
carlopecoraro2
★ 2.2k
0
votes
0
replies
237
views
News:
course: Data Visualization in Python
Visualisation
Python
Data
updated 4 months ago by
GenoMax
125k • written 4 months ago by
carlopecoraro2
★ 2.2k
0
votes
0
replies
221
views
News:
Seascape Genomics in R course
Genomics
R
Seascape
Population
4 months ago by
carlopecoraro2
★ 2.2k
0
votes
0
replies
235
views
News:
Cellosaurus API
line
cell
API
4 months ago by
Amos Bairoch
▴ 110
0
votes
0
replies
241
views
News:
Cellosaurus release 43 is available
cellosaurus
cell-line
updated 7 weeks ago by
Ram
37k • written 4 months ago by
Amos Bairoch
▴ 110
0
votes
0
replies
201
views
News:
Genomics Webinar: Using Mastermind’s New ClinVar Integration to Accelerate Clinical Diagnoses
variant-interpretation
genomics
database
webinar
updated 8 weeks ago by
Ram
37k • written 4 months ago by
Kate
• 0
0
votes
0
replies
183
views
News:
course: Population Genomic Inference from Low-coverage Whole-genome Sequencing Data
whole-genome
genomics
population
low-coverage
sequencing
updated 4 months ago by
Jeremy Leipzig
21k • written 4 months ago by
carlopecoraro2
★ 2.2k
0
votes
0
replies
188
views
News:
:: FINAL CALL :: RNA-Seq Data Analysis Workshop (October 25 - 28, 2022 in Leipzig, Germany) - 2 seats left
RNA-Seq
workshop
transcriptomics
4 months ago by
David Langenberger
9.8k
0
votes
0
replies
172
views
News:
Getting the most out of R course - last call
ggplot2
R
tidyverse
4 months ago by
carlopecoraro2
★ 2.2k
0
votes
0
replies
247
views
News:
The NCTR Indel Calling from Oncopanel Sequencing Data Challenge Winners have been announced!
FDA-challenge
updated 8 weeks ago by
Ram
37k • written 4 months ago by
sarah_p
▴ 10
1
vote
0
replies
207
views
News:
Webinar (free) on Multimodal Single-Cell Data from winner of NeurIPS 2021
ATAC-seq
CITE-seq
scRNA-seq
4 months ago by
Alexander
▴ 70
1
vote
0
replies
225
views
News:
course Reproducible Analysis With R
R
Reproducibility
analysis
Data
4 months ago by
carlopecoraro2
★ 2.2k
0
votes
0
replies
246
views
News:
Virtual Genome Assembly workshop
Genome
Workshop
assembly
Virtual
4 months ago by
singh.vijender
▴ 50
10
votes
4
replies
569
views
News:
Good morning
good
morning
updated 5 months ago by
Istvan Albert
96k • written 5 months ago by
Kevin Blighe
84k
6
votes
7
replies
2.5k
views
News:
New in DiffBind: dba.plotProfile() - Peak profiles and profile heatmaps
DiffBind
ChIP-seq
deepTools
visualization
ATAC-seq
5 months ago by
Rory Stark
★ 1.6k
0
votes
0
replies
261
views
News:
Sex Chromosome Evolution course
course
Genomics
updated 8 weeks ago by
Ram
37k • written 5 months ago by
carlopecoraro2
★ 2.2k
0
votes
0
replies
210
views
News:
Online training - Data visualization in R with ggplot2
Visualization
ggplot2
R
Data
5 months ago by
carlopecoraro2
★ 2.2k
1
vote
0
replies
273
views
News:
Searching for people who can share experience (give free webinars/discuss) on multimodal single cell data
ATAC-seq
CITE-seq
scRNA-seq
5 months ago by
Alexander
▴ 70
0
votes
0
replies
242
views
News:
Online training - Introduction to Deep Learning for biologists
Python
DeepLearning
bigdata
MachineLearning
5 months ago by
carlopecoraro2
★ 2.2k
0
votes
0
replies
364
views
News:
2023 EMBL Courses and Conferences
EMBL
EMBLMalaria
EESImaging
5 months ago by
EMBL Events
• 0
0
votes
0
replies
242
views
News:
Online training -Getting the most out of R
R
Science
analysis
Data
6 months ago by
carlopecoraro2
★ 2.2k
0
votes
0
replies
242
views
News:
Online training - Cancer Genomics in R
Cancer
Genomics
R
updated 8 weeks ago by
Ram
37k • written 6 months ago by
carlopecoraro2
★ 2.2k
0
votes
0
replies
231
views
News:
Online training - DNA methylation in plants and animals
OxfordNanopore
DNAMethylation
BSseq
longreads
PacBio
6 months ago by
carlopecoraro2
★ 2.2k
0
votes
0
replies
257
views
News:
3rd edition of the Analysis of RNA sequencing data with R/Bioconductor course.
RNAseq
Bioconductor
R
6 months ago by
carlopecoraro2
★ 2.2k
4
votes
1
reply
2.0k
views
News:
2014 ISCB Wikipedia Article Competition announcement
ISCB
competition
Wikipedia
written 8.5 years ago by
Ben
★ 2.0k
1
vote
2
replies
515
views
News:
Online training - Introduction to Nextflow
Bionfirmatics
Pipeline
Workflow
Netflow
6 months ago by
carlopecoraro2
★ 2.2k
4
votes
1
reply
363
views
News:
Online Course - A Practical Introduction to NGS Data Analysis (September 26-28, 2022)
workshop
ngs
data-analysis
updated 6 months ago by
Ram
37k • written 7 months ago by
David Langenberger
9.8k
0
votes
0
replies
344
views
News:
Final Call! Tomorrow (7/8) is the Deadline for Phase 1 submissions of the NCTR Indel Calling from Oncopanel Sequencing Data Challenge!
oncopanel
indel-calling
updated 7 weeks ago by
Ram
37k • written 7 months ago by
sarah_p
▴ 10
0
votes
0
replies
281
views
News:
Automate your NGS data analyses and create reproducible/scalable pipelines with NextFlow
pipeline
Nextflow
automation
7 months ago by
David Langenberger
9.8k
0
votes
1
reply
678
views
News:
Hands-On RNA-Seq Data Analysis Workshop in Leipzig, Germany (October 25-28, 2022)
RNA-Seq
Transcriptomics
NGS
Workshop
7 months ago by
David Langenberger
9.8k
0
votes
3
replies
945
views
News:
Less Than One Month Remaining until the Submission Deadline for Phase 1 of the NCTR Indel Calling from Oncopanel Sequencing Data Challenge!
oncopanel
indel-calling
updated 7 weeks ago by
Ram
37k • written 7 months ago by
sarah_p
▴ 10
0
votes
0
replies
262
views
News:
EBI Competency Hub Supporting competency-based training and professional development.
ebi
carreer
7 months ago by
Pierre Lindenbaum
152k
0
votes
0
replies
253
views
News:
Introduction to Statistics in R for biologists
tydeverse
R
Statistics
7 months ago by
carlopecoraro2
★ 2.2k
1
vote
0
replies
250
views
News:
Data analysis with the Tidyverse in July (18th-21st).
Visualization
R
Tidyverse
data-analysis
updated 6 months ago by
Ram
37k • written 7 months ago by
carlopecoraro2
★ 2.2k
1
vote
0
replies
236
views
News:
Use your standard DNA variant caller for SNP calling in Bisulfite-Seq data
bisulfite
BS-Seq
methylation
7 months ago by
David Langenberger
9.8k
0
votes
0
replies
299
views
News:
online training - Data Visualization with Python
Python
Data-Visualization
updated 6 months ago by
Ram
37k • written 7 months ago by
carlopecoraro2
★ 2.2k
0
votes
0
replies
325
views
News:
Cellosaurus release 42 is available
line
cell
biocuration
knowledgebase
database
7 months ago by
Amos Bairoch
▴ 110
0
votes
0
replies
257
views
News:
Online course- Reproducibility in Bioinformatics - 11-13 July
Docker
Reproducibility
updated 7 weeks ago by
Ram
37k • written 7 months ago by
carlopecoraro2
★ 2.2k
1,000 results • Page
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Recent Votes
Answer: how to split multi-fasta file into single fasta file named by header
A: How To Split A Multiple Fasta
Comment: Question on how to filter DESeq2 results correctly and use of the results functi
Answer: Is it possible to do bedtools multicov across the entire genome?
Answer: Is it possible to do bedtools multicov across the entire genome?
Answer: Is it possible to do bedtools multicov across the entire genome?
Answer: Is it possible to do bedtools multicov across the entire genome?
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These are differentially expressed genes, which are around 15K genes from a total of 30 K genes. Then I follow the clustering protocol as g…
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edus_bioinfo
▴ 20
I solved the issue with using bowtie. But now I am experiencing this issue; > Error in makeGRangesFromDataFrame(., seqinfo = genomeinfo, k…
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Sir, How much time does this server take to give output for 1 pair of proteins as I have submitted several hours ago and it still shows ru…
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Thanks alot :)
Comment: Is it possible to do bedtools multicov across the entire genome?
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Amazing, thank you so much! BW, Amy
Answer: Is it possible to do bedtools multicov across the entire genome?
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125k
`mosdepth` ([**LINK**][1]) is an excellent/fast alternative. [1]: https://github.com/brentp/mosdepth
Answer: Index with unmasked or masked in HISAT2
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GenoMax
125k
Use `top level` file. See [**README**][1] more information about other files you are referring to. [1]: https://ftp.ebi.ac.uk/en…
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10k
Simply use then `bedtools genomecov` with `-d` parameter : https://bedtools.readthedocs.io/en/latest/content/tools/genomecov.html
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Programs do not use all the threads/cores all the time. They will do so during appropriate part of the analysis. As long as you have enable…
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Help me to understand. Is this a clustering analysis of differentially expressed genes or an unsupervised clustering analysis (eg WGCNA)?
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Dear Christy, thanks for your interest in the OMA browser. indeed, there seems to be an issue with listing all the genes of a species. W…
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Dear Ziqing this error seems to be related to the splicing information file of one of the genomes. Given that it worked previously, I as…
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RNA editing is detected by identifying differences between the DNA sequence and the RNAseq. If you compare your RNAseq data to the referen…
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DEXSeq is probably not the correct tool for what you are trying to do. If focuses of changes to which exons are included and which exclude…
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I have been looking into something similar (maybe, not sure myself) and I didn't know about cafe. It looks good, thanks for bringing it up.…
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